Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.5e-278 962.2 476 100.0
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 1.0e-268 929.5 478 96.0
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.6e-264 915.6 476 94.5
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 3.9e-263 911.0 475 94.7
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 2.5e-262 908.3 478 94.1
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.0e-260 902.9 473 94.7
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 4.6e-256 887.5 483 93.4
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 4.6e-256 887.5 483 93.4
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 1.1e-249 866.3 477 91.2
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.6e-248 862.4 477 90.6
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.6e-245 852.4 476 89.7
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 4.7e-245 850.9 479 89.1
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 3.1e-244 848.2 477 89.3
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 7.6e-243 843.6 477 89.1
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.9e-242 841.6 478 88.3
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.6e-240 835.9 477 85.7
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 2.6e-227 792.0 485 80.2
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 5.4e-225 784.3 487 81.5
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 5.4e-225 784.3 485 79.6
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 6.0e-224 780.8 485 80.0
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.3e-223 779.6 486 79.6
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 2.3e-223 778.9 489 79.1
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 3.0e-223 778.5 485 79.4
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 3.9e-223 778.1 478 83.5
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 8.7e-223 776.9 489 78.9
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 8.7e-223 776.9 485 79.0
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.1e-222 776.5 486 78.8
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.6e-222 774.2 484 80.2
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 7.4e-222 773.9 485 79.6
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 9.6e-222 773.5 484 79.8
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.3e-221 773.1 484 79.3
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.6e-221 772.7 483 78.7
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 2.1e-221 772.3 484 79.8
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.8e-221 771.2 484 80.2
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.8e-221 771.2 484 80.2
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 4.8e-221 771.2 488 78.9
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 3.1e-220 768.5 485 79.2
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 4.0e-220 768.1 485 79.2
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 1.2e-219 766.5 474 80.2
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.5e-219 766.1 478 79.1
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 2.0e-219 765.8 485 79.0
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.6e-219 765.4 485 77.9
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 4.5e-219 764.6 484 78.9
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 9.9e-219 763.5 485 79.0
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.7e-218 762.7 484 79.1
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.9e-218 761.9 488 77.7
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 3.8e-218 761.5 485 77.1
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 3.8e-218 761.5 480 79.2
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 3.8e-218 761.5 485 78.8
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 3.8e-218 761.5 483 78.5
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 3.8e-218 761.5 480 79.2
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 4.9e-218 761.1 477 78.4
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 6.4e-218 760.8 483 78.5
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.4e-218 760.8 488 78.3
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 6.4e-218 760.8 485 79.0
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.4e-218 760.4 484 79.3
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.1e-217 760.0 480 79.2
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.4e-217 759.6 489 77.9
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.4e-217 759.6 484 79.1
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.4e-217 759.6 480 77.9
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.4e-217 759.6 484 78.7
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 1.9e-217 759.2 484 78.1
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.4e-217 758.8 489 78.1
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.4e-217 758.8 484 78.7
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.2e-217 758.1 479 78.3
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 4.2e-217 758.1 484 76.4
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.2e-217 758.1 484 79.1
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.2e-217 758.1 484 78.9
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.2e-217 758.1 490 78.2
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 5.5e-217 757.7 480 78.8
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 5.5e-217 757.7 489 77.7
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 5.5e-217 757.7 480 77.5
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.1e-217 757.3 479 78.5
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 7.1e-217 757.3 490 78.2
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.3e-217 756.9 484 78.9
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.7e-216 755.4 487 78.0
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 3.5e-216 755.0 484 78.1
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 4.6e-216 754.6 485 77.9
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 4.6e-216 754.6 482 77.8
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 4.6e-216 754.6 484 79.1
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.0e-215 753.4 483 77.8
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.8e-215 752.7 488 77.5
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 6.7e-215 750.7 480 77.9
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 1.5e-214 749.6 481 76.9
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.5e-214 748.8 484 76.7
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 3.3e-214 748.4 417 86.6
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 9.6e-214 746.9 484 76.0
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 3.7e-213 745.0 483 77.2
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 6.2e-213 744.2 485 77.1
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 6.2e-213 744.2 486 77.4
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 8.1e-213 743.8 484 75.4
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.1e-212 743.4 479 76.4
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 9.0e-212 740.3 516 73.1
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.6e-211 738.8 420 84.0
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 2.9e-210 735.3 478 76.8
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 2.9e-210 735.3 476 77.1
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 4.9e-210 734.6 485 75.3
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 7.1e-209 730.7 478 75.1
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 4.2e-201 704.9 471 74.7
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 6.7e-199 697.6 488 73.2
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.8e-196 689.5 442 77.6
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.0e-194 683.7 414 76.1
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 6.5e-194 681.0 415 77.8
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 5.1e-191 671.4 428 75.5
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 9.7e-190 667.2 389 80.2
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 6.9e-188 661.0 423 74.0
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.0e-175 620.5 398 73.1
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.5e-171 605.5 385 77.9
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.2e-169 597.8 435 71.3
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 2.0e-166 589.7 479 65.6
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 4.5e-163 578.6 378 69.3
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 1.0e-162 577.4 393 66.7
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 4.7e-152 542.0 289 89.3
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 4.0e-151 538.9 289 88.9
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.9e-140 503.4 339 72.9
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 3.9e-138 495.7 343 70.6
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.6e-105 385.6 237 79.3
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.4e-103 380.9 261 72.0
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.4e-79 301.2 171 82.5
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.4e-63 247.3 196 64.3
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 1.7e-61 241.1 130 88.5
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.3e-57 226.9 135 81.5
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.4e-55 220.7 136 77.2
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.4e-47 194.9 140 73.6
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 5.2e-34 149.8 97 76.3
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 2.4e-31 141.0 161 52.8
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 1.2e-30 138.7 105 65.7
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 5.4e-15 86.7 59 72.9
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 1.7e-08 65.1 128 30.5
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.9e-07 61.6 156 30.1
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 5.4e-07 60.1 139 28.8
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 5.4e-07 60.1 128 32.0
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.2e-06 58.9 154 27.3
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 2.1e-06 58.2 166 25.9
Nn2g15146 Nelumbo nucifera HOM05D000776 ORTHO05D001624 6.0e-06 56.6 127 29.1
AT4G20460 Arabidopsis thaliana HOM05D000776 ORTHO05D002281 7.8e-06 56.2 218 26.6


User provided reference genes

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