Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g30630 Schrenkiella parvula HOM05D008625 ORTHO05D010623 6.8e-105 384.0 198 100.0
Thhalv10026293m.g Eutrema salsugineum HOM05D008625 ORTHO05D010623 9.2e-94 347.1 199 92.0
CARHR240860 Cardamine hirsuta HOM05D008625 ORTHO05D010623 1.8e-89 332.8 198 88.9
BcaNung06387 Brassica carinata HOM05D008625 ORTHO05D010623 3.4e-88 328.6 198 88.9
A03p61610 Brassica napus HOM05D008625 ORTHO05D010623 8.4e-87 323.9 198 87.4
C07p59370 Brassica napus HOM05D008625 ORTHO05D010623 1.9e-86 322.8 198 87.4
BolC7t46381H Brassica oleracea HOM05D008625 ORTHO05D010623 1.9e-86 322.8 198 87.4
BraA03t15203Z Brassica rapa HOM05D008625 ORTHO05D010623 4.2e-86 321.6 198 86.9
AT4G32860 Arabidopsis thaliana HOM05D008625 ORTHO05D010623 9.3e-86 320.5 199 85.4
C03p86970 Brassica napus HOM05D008625 ORTHO05D010623 3.5e-85 318.5 198 87.9
C03p86990 Brassica napus HOM05D008625 ORTHO05D010623 3.5e-85 318.5 198 87.9
AL7G18860 Arabidopsis lyrata HOM05D008625 ORTHO05D010623 4.6e-85 318.2 200 85.0
A08p17870 Brassica napus HOM05D008625 ORTHO05D010623 4.6e-85 318.2 198 87.9
BraA08t33739Z Brassica rapa HOM05D008625 ORTHO05D010623 4.6e-85 318.2 198 87.9
BolC3t20994H Brassica oleracea HOM05D008625 ORTHO05D010623 1.7e-84 316.2 198 87.4
BolC1t00594H Brassica oleracea HOM05D008625 ORTHO05D010623 1.9e-83 312.8 198 85.9
BcaC09g52083 Brassica carinata HOM05D008625 ORTHO05D010623 9.6e-83 310.5 198 84.8
C01p06020 Brassica napus HOM05D008625 ORTHO05D010623 9.6e-83 310.5 198 84.8
A01p05420 Brassica napus HOM05D008625 ORTHO05D010623 1.6e-82 309.7 198 84.3
BraA01t00516Z Brassica rapa HOM05D008625 ORTHO05D010623 1.6e-82 309.7 198 84.3
Carub.0007s0763 Capsella rubella HOM05D008625 ORTHO05D010623 9.0e-81 303.9 198 83.8
BcaC09g52084 Brassica carinata HOM05D008625 ORTHO05D010623 2.4e-78 295.8 196 81.6
Aa31sc706G10 Aethionema arabicum HOM05D008625 ORTHO05D010623 2.7e-77 292.4 204 77.5
BcaB03g12766 Brassica carinata HOM05D008625 ORTHO05D010623 3.5e-69 265.4 198 75.3
THA.LOC104803750 Tarenaya hassleriana HOM05D008625 ORTHO05D010623 9.3e-54 214.2 196 67.3
THA.LOC104804518 Tarenaya hassleriana HOM05D008625 ORTHO05D010623 8.0e-29 131.3 136 61.0
Cpa.g.sc7.202 Carica papaya HOM05D008625 ORTHO05D010623 1.8e-17 93.6 197 36.5
Medtr3g109920 Medicago truncatula HOM05D008625 ORTHO05D010623 1.3e-15 87.4 195 37.4
Glyma.04G085800 Glycine max HOM05D008625 ORTHO05D010623 2.2e-15 86.7 191 36.6
Medtr3g109900 Medicago truncatula HOM05D008625 ORTHO05D010623 3.8e-15 85.9 193 36.8
VMungo1309G2682 Vigna mungo HOM05D008625 ORTHO05D010623 1.9e-14 83.6 153 39.9
Phvul.009G111200 Phaseolus vulgaris HOM05D008625 ORTHO05D010623 3.2e-14 82.8 153 41.2
COL.COLO4_20990 Corchorus olitorius HOM05D001131 ORTHO05D010623 7.2e-14 81.6 198 35.9
Psat5g020400 Pisum sativum HOM05D008625 ORTHO05D010623 9.4e-14 81.3 190 35.8
Prupe.1G446200 Prunus persica HOM05D001131 ORTHO05D010623 1.2e-13 80.9 210 35.7
MD15G1091300 Malus domestica HOM05D001131 ORTHO05D010623 1.6e-13 80.5 206 34.5
arahy.Tifrunner.gnm1.ann1.66V3J9 Arachis hypogaea HOM05D008625 ORTHO05D010623 3.6e-13 79.3 196 36.2
MD08G1111800 Malus domestica HOM05D008625 ORTHO05D010623 4.7e-13 79.0 218 34.9
Gohir.A06G092000 Gossypium hirsutum HOM05D001131 ORTHO05D010623 6.1e-13 78.6 217 35.9
Gorai.010G105500 Gossypium raimondii HOM05D001131 ORTHO05D010623 6.1e-13 78.6 217 34.6
Psat5g020440 Pisum sativum HOM05D008625 ORTHO05D010623 8.0e-13 78.2 193 34.7
TPR.G15108 Trifolium pratense HOM05D008625 ORTHO05D010623 8.0e-13 78.2 193 35.2
Glyma.06G087400 Glycine max HOM05D008625 ORTHO05D010623 2.3e-12 76.6 193 34.7
Thecc.09G047000 Theobroma cacao HOM05D001131 ORTHO05D010623 3.0e-12 76.3 208 34.6
Gohir.D06G091500 Gossypium hirsutum HOM05D001131 ORTHO05D010623 4.0e-12 75.9 205 35.6
Ca_15580_v3 Cicer arietinum L. HOM05D008625 ORTHO05D010623 8.8e-12 74.7 152 36.8
TWI63G1453 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 8.8e-12 74.7 206 33.5
Ciclev10009617m.g Citrus clementina HOM05D001131 ORTHO05D000972 1.2e-11 74.3 208 33.7
Potri.006G236700 Populus trichocarpa HOM05D001131 ORTHO05D000972 1.5e-11 73.9 224 32.1
Sabra18G0045000 Salix brachista HOM05D001131 ORTHO05D000972 2.6e-11 73.2 211 32.7
Manes.16G074200 Manihot esculenta HOM05D001131 ORTHO05D000972 4.4e-11 72.4 237 30.0
Lalb_Chr08g0242961 Lupinus albus HOM05D008625 ORTHO05D010623 5.7e-11 72.0 193 33.2
TAR624G0151 Trochodendron aralioides HOM05D001131 ORTHO05D000972 7.5e-11 71.6 224 31.7
Sabra06G0185000 Salix brachista HOM05D001131 ORTHO05D000972 1.7e-10 70.5 227 30.4
GSVIVG01035287001 Vitis vinifera HOM05D001131 ORTHO05D000972 1.7e-10 70.5 225 32.0
CANSAT25G2493 Cannabis sativa HOM05D008625 ORTHO05D010623 2.8e-10 69.7 218 32.1
Manes.03G059800 Manihot esculenta HOM05D001131 ORTHO05D000972 4.9e-10 68.9 224 30.4
FAN15G2009 Fragaria x ananassa HOM05D008625 ORTHO05D010623 6.3e-10 68.6 176 34.1
FAN20G1640 Fragaria x ananassa HOM05D008625 ORTHO05D010623 8.3e-10 68.2 176 34.1
Lj1g0026047 Lotus japonicus HOM05D008625 ORTHO05D010623 1.4e-09 67.4 190 31.1
Potri.018G046500 Populus trichocarpa HOM05D001131 ORTHO05D000972 2.4e-09 66.6 225 30.7
Nn8g39098 Nelumbo nucifera HOM05D001131 ORTHO05D000972 5.4e-09 65.5 229 27.9
RcHm_v2.0_Chr6g0306461 Rosa chinensis HOM05D008625 ORTHO05D010623 1.2e-08 64.3 182 31.3
FvH4_2g35430 Fragaria vesca HOM05D008625 ORTHO05D010623 2.0e-08 63.5 178 33.7
CSS0013249 Camellia sinensis var. sinensis HOM05D001131 ORTHO05D000972 2.7e-08 63.2 198 30.8
FAN27G2073 Fragaria x ananassa HOM05D008625 ORTHO05D010623 7.7e-08 61.6 178 33.1
Atru.chr7.2063 Acer truncatum HOM05D001131 ORTHO05D000972 1.3e-07 60.8 202 33.2
DCAR_032098 Daucus carota HOM05D001131 ORTHO05D000972 6.6e-07 58.5 199 30.7
Aqoxy7G01451 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 8.6e-07 58.2 220 27.3
Aqoxy7G03882 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 1.1e-06 57.8 119 34.5
PSO210G5578 Papaver somniferum HOM05D001131 ORTHO05D000972 1.5e-06 57.4 228 28.1
CSS0029495 Camellia sinensis var. sinensis HOM05D001131 ORTHO05D000972 3.3e-06 56.2 198 28.8
MBI04_g06590_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 3.3e-06 56.2 227 28.6
CSS0010038 Camellia sinensis var. sinensis HOM05D001131 ORTHO05D000972 4.3e-06 55.8 207 28.5
CANSAT56G3966 Cannabis sativa HOM05D001131 ORTHO05D000972 4.3e-06 55.8 216 29.6
Hma1.2p1_0945F.1_g240300 Hydrangea macrophylla HOM05D001131 ORTHO05D000972 5.6e-06 55.5 204 27.5
PGR142G2343 Punica granatum HOM05D001131 ORTHO05D000972 5.6e-06 55.5 205 31.2
MSTRG.9484 Avicennia marina HOM05D001131 ORTHO05D000972 9.5e-06 54.7 200 31.0


User provided reference genes

Program Settings