Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.5e-95 352.8 174 100.0
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 6.9e-93 344.0 174 96.0
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.7e-89 332.0 174 91.4
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.9e-87 325.9 174 90.8
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 9.6e-87 323.6 174 91.4
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.3e-86 323.2 174 92.5
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 1.7e-83 312.8 176 87.5
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.4e-82 309.7 176 85.8
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 5.5e-82 307.8 162 92.0
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 9.3e-82 307.0 162 90.7
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 9.3e-82 307.0 176 86.9
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 2.1e-81 305.8 176 85.8
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 2.3e-80 302.4 174 83.9
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.3e-78 296.6 174 83.3
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 2.1e-78 295.8 174 82.8
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 2.1e-78 295.8 174 83.3
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 2.1e-78 295.8 171 83.6
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 4.8e-78 294.7 171 83.6
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.1e-77 293.5 171 83.6
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 1.1e-77 293.5 171 82.5
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 3.1e-77 292.0 174 82.2
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 4.0e-77 291.6 174 82.2
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.6e-76 288.9 171 81.9
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 3.4e-76 288.5 170 81.8
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.0e-75 287.0 170 81.2
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.0e-75 287.0 170 81.2
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 2.2e-75 285.8 171 78.9
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.9e-75 285.4 169 81.7
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 3.8e-75 285.0 171 81.9
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 3.8e-75 285.0 171 78.9
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 4.9e-75 284.6 175 80.0
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 4.9e-75 284.6 171 80.1
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 6.5e-75 284.3 174 79.9
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.4e-74 283.1 171 80.1
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 4.2e-74 281.6 175 79.4
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 4.2e-74 281.6 174 78.2
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 5.5e-74 281.2 171 78.9
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 7.1e-74 280.8 170 78.8
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.2e-73 280.0 170 81.2
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 1.2e-73 280.0 169 79.9
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.6e-73 279.6 171 78.9
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.6e-73 279.6 171 78.9
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 2.1e-73 279.3 174 78.7
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 4.6e-73 278.1 168 79.8
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 7.9e-73 277.3 168 80.4
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.0e-72 276.9 171 77.8
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.3e-72 276.6 174 78.7
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 3.0e-72 275.4 174 75.9
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 3.9e-72 275.0 170 78.2
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 5.1e-72 274.6 174 75.9
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 8.7e-72 273.9 171 78.9
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 8.7e-72 273.9 172 78.5
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.1e-71 273.5 170 80.0
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.5e-71 272.3 170 78.2
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 2.5e-71 272.3 175 77.7
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 2.5e-71 272.3 158 83.5
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.5e-71 272.3 172 78.5
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 3.3e-71 271.9 170 77.6
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 3.3e-71 271.9 171 75.4
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.2e-70 269.2 165 79.4
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 2.2e-70 269.2 168 76.8
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 6.3e-70 267.7 171 74.9
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.1e-69 266.9 155 81.3
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.8e-69 266.2 168 76.2
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 1.8e-69 266.2 170 77.1
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.4e-69 265.8 153 81.7
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 3.1e-69 265.4 171 74.9
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 3.1e-69 265.4 179 74.3
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 9.0e-69 263.8 169 75.7
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 9.0e-69 263.8 169 75.7
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 1.5e-68 263.1 169 76.9
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 2.6e-68 262.3 157 80.9
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 3.4e-68 261.9 169 75.7
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 5.9e-68 261.2 168 75.6
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 7.6e-68 260.8 169 75.7
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.3e-67 260.0 169 75.1
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 8.5e-67 257.3 169 74.0
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 1.1e-66 256.9 168 74.4
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.1e-66 256.9 167 75.4
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 5.5e-66 254.6 168 73.2
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 7.2e-66 254.2 169 73.4
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 7.2e-66 254.2 169 73.4
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 9.3e-66 253.8 188 68.1
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.2e-65 253.4 168 73.8
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.6e-65 253.1 169 73.4
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 1.6e-65 253.1 155 76.8
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.1e-65 252.7 165 75.8
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 2.7e-65 252.3 166 74.7
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 3.6e-65 251.9 168 75.0
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 4.6e-65 251.5 165 75.2
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 6.1e-65 251.1 171 74.3
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 6.1e-65 251.1 173 71.1
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.9e-64 248.4 165 74.5
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 3.9e-64 248.4 154 77.3
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.1e-63 246.9 171 71.9
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.5e-63 246.5 172 69.2
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.9e-63 246.1 158 76.6
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.9e-63 246.1 169 71.6
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 4.3e-63 245.0 173 72.3
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.7e-62 243.0 174 69.0
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.2e-62 242.7 163 71.8
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.8e-61 239.6 139 79.9
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.8e-61 239.6 139 79.9
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 1.8e-61 239.6 169 69.8
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 6.9e-61 237.7 156 74.4
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 8.5e-59 230.7 187 62.6
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.8e-56 223.0 170 69.4
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.5e-55 219.9 154 68.2
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 4.4e-55 218.4 150 68.0
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 4.8e-54 214.9 157 66.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 4.8e-54 214.9 142 74.6
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 8.2e-54 214.2 129 80.6
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.1e-53 213.8 177 62.7
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.5e-52 209.9 317 42.3
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 1.0e-51 207.2 134 75.4
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.2e-51 206.1 159 61.0
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 5.5e-50 201.4 141 69.5
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.8e-45 186.4 110 79.1
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 3.0e-40 169.1 176 55.1
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 9.7e-39 164.1 309 37.2
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.0e-36 156.4 235 43.0
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 4.2e-34 148.7 206 44.2
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 7.7e-28 127.9 84 75.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 3.6e-25 119.0 67 82.1
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.0e-24 115.5 80 68.8
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.6e-23 112.8 67 74.6
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.4e-23 112.1 79 64.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 1.0e-16 90.9 44 86.4
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.7e-11 73.6 81 54.3
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 1.1e-10 70.9 88 43.2
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 2.1e-09 66.6 70 48.6
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.1e-08 62.8 118 34.7
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 4.4e-07 58.9 38 71.1


User provided reference genes

Program Settings