Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 5.1e-207 724.2 362 100.0
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 3.9e-175 618.2 364 87.1
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 7.7e-171 604.0 364 84.9
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 2.9e-170 602.1 364 84.6
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 8.5e-170 600.5 364 84.3
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 3.2e-169 598.6 363 84.6
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 3.6e-168 595.1 360 85.0
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 2.2e-165 585.9 360 84.7
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 1.8e-164 582.8 363 81.8
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 7.7e-163 577.4 360 83.3
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 1.4e-156 556.6 333 86.8
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 1.8e-148 529.6 365 80.5
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.1e-145 520.4 364 79.7
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-141 506.9 366 79.0
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 4.1e-140 501.9 364 77.7
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 1.1e-137 493.8 369 75.9
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 1.8e-124 449.9 357 65.3
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 3.2e-92 342.8 365 58.1
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 1.2e-62 244.6 159 79.2
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 3.6e-59 233.0 164 73.2
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 2.8e-56 223.4 143 80.4
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.1e-55 219.5 414 38.9
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 2.2e-53 213.8 400 40.2
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 3.8e-53 213.0 407 39.8
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.4e-52 211.1 437 38.2
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 4.2e-52 209.5 442 36.9
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 7.2e-52 208.8 406 38.2
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 1.2e-51 208.0 414 38.6
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 4.7e-51 206.1 407 38.3
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.3e-50 203.8 414 38.2
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.0e-50 203.4 430 37.4
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 1.1e-49 201.4 415 38.1
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.0e-49 200.7 416 37.5
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 2.6e-49 200.3 409 37.4
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 4.4e-49 199.5 341 42.2
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 4.4e-49 199.5 325 41.8
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.7e-49 199.1 439 36.4
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 5.7e-49 199.1 423 37.1
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.7e-48 196.4 435 35.6
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 3.7e-48 196.4 422 36.3
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 3.7e-48 196.4 408 38.0
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 4.8e-48 196.1 417 37.6
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.8e-48 196.1 416 37.3
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 8.2e-48 195.3 432 37.7
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 4.1e-47 193.0 417 36.0
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 9.1e-47 191.8 327 40.7
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 2.0e-46 190.7 346 39.9
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 5.9e-46 189.1 414 37.2
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.0e-45 188.3 414 37.2
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.7e-45 187.6 375 38.1
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.7e-45 187.6 407 37.1
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 2.2e-45 187.2 425 38.1
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 2.2e-45 187.2 401 37.4
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 2.9e-45 186.8 405 37.3
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 6.5e-45 185.7 405 39.0
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 6.5e-45 185.7 375 38.1
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 8.5e-45 185.3 409 36.2
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.9e-44 184.1 330 39.1
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 7.2e-44 182.2 411 36.3
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 9.4e-44 181.8 366 37.4
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.3e-42 177.2 411 33.8
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 2.3e-42 177.2 306 40.2
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 6.7e-42 175.6 351 37.3
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.5e-41 174.5 329 39.2
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 1.5e-41 174.5 425 34.1
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 2.0e-41 174.1 417 34.8
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 3.3e-41 173.3 462 34.8
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 7.4e-41 172.2 434 33.2
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.8e-39 167.5 335 38.8
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.4e-39 167.2 439 33.3
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 9.1e-39 165.2 413 33.7
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 2.6e-38 163.7 295 41.0
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 5.9e-38 162.5 403 33.3
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 7.7e-38 162.2 326 37.7
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-37 161.4 107 77.6
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 1.3e-37 161.4 107 77.6
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.3e-37 161.4 312 38.5
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.7e-37 161.0 346 39.0
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.2e-37 160.6 320 37.8
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 2.2e-37 160.6 399 34.1
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 3.8e-37 159.8 398 36.4
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 6.5e-37 159.1 345 35.4
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 6.5e-37 159.1 327 37.0
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 1.5e-36 157.9 325 36.9
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.5e-36 157.9 408 33.6
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 1.9e-36 157.5 403 32.8
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.5e-36 157.1 339 37.5
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 3.2e-36 156.8 331 38.4
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 4.2e-36 156.4 338 37.0
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 9.4e-36 155.2 416 33.7
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 9.4e-36 155.2 308 37.7
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 1.2e-35 154.8 331 38.7
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 2.1e-35 154.1 329 37.4
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 3.6e-35 153.3 309 39.2
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 1.4e-34 151.4 363 36.1
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 4.0e-34 149.8 444 33.1
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 5.2e-34 149.4 426 33.3
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 5.2e-34 149.4 214 45.8
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 5.2e-34 149.4 448 32.4
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.0e-33 147.5 321 37.4
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.3e-32 144.8 438 32.0
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 2.2e-32 144.1 250 41.6
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 2.2e-32 144.1 326 34.4
CARHR240540 Cardamine hirsuta HOM05D005141 ORTHO05D006250 6.3e-32 142.5 78 89.7
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 1.1e-31 141.7 307 36.5
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 1.4e-31 141.4 319 35.4
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 1.4e-31 141.4 343 36.2
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 2.4e-31 140.6 247 41.7
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 3.1e-31 140.2 331 36.6
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 9.1e-31 138.7 333 35.1
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 4.5e-30 136.3 279 36.2
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.7e-29 134.4 455 31.9
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 6.5e-29 132.5 274 38.0
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 6.5e-29 132.5 328 33.2
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 2.5e-28 130.6 324 34.9
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.2e-27 128.3 215 42.8
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 2.1e-27 127.5 249 36.1
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 6.1e-27 125.9 146 51.4
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 6.1e-27 125.9 76 81.6
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 5.2e-26 122.9 375 32.3
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.2e-25 121.7 272 37.1
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 1.2e-25 121.7 297 34.3
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 2.8e-24 117.1 315 31.1
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 8.3e-24 115.5 259 35.5
CARHR240550 Cardamine hirsuta HOM05D005141 ORTHO05D006250 3.5e-22 110.2 60 86.7
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 3.8e-21 106.7 297 34.7
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 2.1e-19 100.9 203 37.4
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 1.2e-17 95.1 343 30.9
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 7.5e-17 92.4 128 44.5
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.1e-15 88.6 150 40.7
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 9.2e-15 85.5 120 45.8
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 1.3e-13 81.6 131 40.5
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 2.9e-13 80.5 144 39.6
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 2.9e-13 80.5 157 38.2
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 3.8e-13 80.1 132 40.2
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 9.5e-12 75.5 146 37.0
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 3.6e-11 73.6 68 55.9
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 1.2e-09 68.6 123 42.3
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.3e-08 65.1 267 29.6
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 3.7e-08 63.5 167 31.1
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 2.4e-07 60.8 67 46.3


User provided reference genes

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