Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 0.0e+00 1421.0 728 100.0
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 0.0e+00 1279.2 701 93.3
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 0.0e+00 1272.3 700 92.9
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 0.0e+00 1269.6 700 92.1
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 0.0e+00 1255.4 702 91.5
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 0.0e+00 1245.0 701 91.2
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 0.0e+00 1244.6 704 91.9
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 0.0e+00 1233.8 700 90.4
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 0.0e+00 1228.0 701 90.3
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 0.0e+00 1225.3 701 90.2
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 0.0e+00 1208.4 701 89.3
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 0.0e+00 1171.4 703 86.2
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 0.0e+00 1113.2 700 81.1
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.2e-279 966.5 674 73.0
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.5e-279 966.1 674 73.6
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 1.3e-278 963.0 698 71.6
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 9.4e-277 956.8 681 72.1
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 1.2e-276 956.4 702 70.9
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 5.1e-275 951.0 689 69.8
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 7.4e-274 947.2 677 72.7
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 2.8e-273 945.3 670 71.8
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 6.3e-273 944.1 684 71.3
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 2.2e-270 935.6 696 70.3
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.2e-270 935.6 674 71.8
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 2.9e-270 935.3 669 71.6
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 5.0e-270 934.5 692 70.2
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.4e-269 932.9 692 70.5
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 2.5e-269 932.2 672 71.1
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 3.6e-268 928.3 704 68.6
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 6.1e-268 927.5 698 69.1
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 7.9e-268 927.2 668 70.8
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 7.9e-268 927.2 659 71.3
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 7.9e-268 927.2 706 68.8
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 1.0e-267 926.8 679 70.8
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.4e-267 926.4 668 70.8
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.4e-267 926.4 705 68.9
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 3.0e-267 925.2 701 69.3
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 5.2e-267 924.5 660 71.5
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 5.2e-267 924.5 660 71.5
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 5.2e-267 924.5 661 70.8
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 8.8e-267 923.7 688 68.9
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.5e-266 922.9 698 68.8
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 8.2e-265 917.1 667 69.9
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.4e-264 916.4 752 64.2
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 5.3e-264 914.4 685 69.2
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 4.5e-263 911.4 704 68.6
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 5.9e-263 911.0 669 69.4
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 7.7e-263 910.6 682 68.9
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.0e-262 910.2 714 67.9
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 1.0e-262 910.2 674 69.0
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.2e-262 909.1 699 69.2
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 4.2e-261 904.8 668 69.0
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 5.5e-261 904.4 667 69.9
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.0e-259 900.2 669 68.8
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 1.0e-259 900.2 680 68.2
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.4e-259 899.8 663 69.2
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 5.2e-259 897.9 712 66.0
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 8.8e-259 897.1 698 67.9
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 1.8e-256 889.4 678 68.0
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 2.4e-256 889.0 683 67.3
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 3.1e-256 888.6 668 70.1
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 3.1e-256 888.6 696 65.7
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 5.3e-256 887.9 700 65.6
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 5.3e-256 887.9 672 68.2
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 3.8e-254 881.7 729 65.4
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.8e-251 872.8 672 68.0
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 5.2e-251 871.3 657 68.3
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 1.3e-249 866.7 718 64.3
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.1e-248 863.6 721 63.7
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.8e-248 862.8 678 65.9
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.6e-247 859.8 664 68.1
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.9e-246 855.5 598 73.1
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 9.5e-245 850.5 667 66.4
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 1.2e-244 850.1 667 66.4
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 3.0e-243 845.5 733 61.8
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 9.8e-242 840.5 603 71.5
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 1.1e-240 837.0 694 65.1
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 4.5e-239 831.6 693 62.3
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.0e-238 830.5 597 70.0
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 3.0e-235 818.9 660 66.1
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 1.5e-234 816.6 698 64.3
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 9.8e-234 813.9 717 61.1
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 9.8e-234 813.9 661 64.1
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.1e-229 800.4 597 69.2
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.2e-218 763.8 629 62.8
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 4.4e-218 761.9 619 65.6
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 4.9e-217 758.4 702 59.0
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.4e-216 756.1 568 68.0
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.9e-213 746.5 594 64.6
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.4e-211 740.3 571 67.3
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 8.4e-185 651.4 670 53.7
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.6e-180 637.1 1264 35.8
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 9.0e-179 631.3 618 55.8
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 2.6e-178 629.8 656 53.4
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 5.7e-173 612.1 661 50.7
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 5.5e-168 595.5 393 76.1
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.9e-160 570.5 437 68.0
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 6.7e-150 535.4 394 67.5
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.2e-138 498.0 417 65.2
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 8.5e-137 491.9 727 42.5
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 3.7e-132 476.5 617 45.7
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 4.1e-131 473.0 472 53.0
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 5.2e-126 456.1 288 84.0
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.4e-123 448.0 332 67.8
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.9e-107 394.4 265 74.0
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 4.3e-96 356.7 217 78.3
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 8.1e-95 352.4 466 48.9
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.3e-88 330.5 318 59.1
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 2.0e-85 321.2 257 67.7
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.5e-80 305.1 195 78.5
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.0e-77 294.7 279 60.9
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.9e-76 290.0 195 73.3
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 3.4e-69 267.3 625 33.0
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.5e-56 224.6 147 75.5
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 5.1e-49 200.3 150 65.3
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 3.7e-39 167.5 195 52.8
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 3.1e-38 164.5 153 60.1
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 7.4e-32 143.3 102 67.6
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 3.3e-24 117.9 106 62.3
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 5.7e-24 117.1 127 53.5
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 2.2e-23 115.2 144 52.1
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.6e-16 91.7 68 67.6
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 7.5e-16 90.1 103 49.5
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 3.7e-15 87.8 53 75.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.2e-13 82.8 151 39.7
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 2.1e-10 72.0 85 49.4


User provided reference genes

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