Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.6e-96 354.8 161 100.0
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-46 189.1 105 80.0
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-46 189.1 105 80.0
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 2.6e-46 189.1 105 80.0
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 2.6e-46 189.1 105 80.0
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 3.4e-46 188.7 105 80.0
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 3.4e-46 188.7 105 80.0
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 9.9e-46 187.2 105 80.0
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 9.9e-46 187.2 105 80.0
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 2.9e-45 185.7 105 79.0
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 2.9e-45 185.7 105 79.0
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 1.9e-44 183.0 106 77.4
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 4.2e-44 181.8 105 77.1
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 9.6e-41 170.6 101 77.2
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.5e-38 161.8 105 68.6
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 7.9e-35 151.0 109 61.5
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 7.9e-35 151.0 109 61.5
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 8.7e-34 147.5 110 60.9
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 3.3e-33 145.6 111 58.6
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 3.7e-32 142.1 112 55.4
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.1e-31 140.6 111 59.5
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.6e-30 136.0 111 57.7
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.3e-29 133.7 112 51.8
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-29 133.7 112 52.7
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 8.5e-29 131.0 97 60.8
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 2.5e-28 129.4 103 57.3
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 2.5e-28 129.4 103 57.3
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 3.2e-28 129.0 103 57.3
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 9.3e-28 127.5 111 50.5
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.6e-27 126.7 112 50.0
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 1.6e-27 126.7 103 56.3
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-26 123.6 104 55.8
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 1.3e-26 123.6 110 51.8
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.5e-25 119.4 111 51.4
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 4.3e-25 118.6 114 45.6
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.3e-25 118.6 111 52.3
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-24 117.1 117 43.6
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.2e-24 116.3 112 47.3
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-24 116.3 113 46.9
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-24 116.3 113 46.9
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-24 115.9 113 46.0
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 2.8e-24 115.9 113 46.0
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-24 115.5 107 46.7
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-24 115.5 107 46.7
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 3.7e-24 115.5 107 46.7
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 3.7e-24 115.5 111 47.7
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 4.8e-24 115.2 107 46.7
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 4.8e-24 115.2 107 46.7
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 6.3e-24 114.8 105 47.6
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 6.3e-24 114.8 112 46.4
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 6.3e-24 114.8 116 47.4
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 8.2e-24 114.4 106 51.9
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 8.2e-24 114.4 112 46.4
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 8.2e-24 114.4 106 51.9
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-23 114.0 112 45.5
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-23 114.0 112 45.5
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.1e-23 114.0 107 52.3
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 1.4e-23 113.6 112 45.5
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-22 109.4 104 50.0
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-22 109.4 104 48.1
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.6e-22 109.4 108 46.3
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 5.9e-22 108.2 112 44.6
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 3.8e-21 105.5 107 43.9
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 3.8e-21 105.5 108 51.9
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 1.1e-20 104.0 130 39.2
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 1.1e-20 104.0 109 49.5
MELO3C003988.2 Cucumis melo HOM05D006945 ORTHO05D005549 2.1e-19 99.8 110 47.3
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.1e-19 99.8 102 45.1
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 4.7e-19 98.6 108 47.2
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.9e-19 97.8 113 42.5
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 7.9e-19 97.8 105 48.6
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.4e-18 97.1 106 43.4
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.9e-18 95.5 106 43.4
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.9e-18 95.5 106 43.4
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 8.8e-18 94.4 106 43.4
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 8.8e-18 94.4 87 52.9
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 1.5e-17 93.6 86 53.5
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 2.0e-17 93.2 120 43.3
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.6e-17 92.8 106 41.5
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 5.7e-17 91.7 110 40.9
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 7.4e-17 91.3 107 40.2
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 9.7e-17 90.9 107 40.2
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.3e-16 90.5 110 39.1
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 2.2e-16 89.7 114 44.7
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 2.8e-16 89.4 124 41.1
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 8.2e-16 87.8 113 38.1
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 6.9e-15 84.7 114 37.7
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.6e-14 82.8 96 42.7
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.7e-13 80.1 105 38.1
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 4.2e-12 75.5 107 33.6
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.5e-12 75.1 106 38.7
Sabra18G0112900 Salix brachista HOM05D009688 ORTHO05D005549 2.7e-11 72.8 108 37.0
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 8.0e-11 71.2 80 40.0
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 5.2e-10 68.6 130 33.1
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.0e-09 66.6 111 32.4
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.6e-09 66.2 58 53.4
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 3.3e-09 65.9 104 30.8
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 4.4e-09 65.5 104 30.8
Eucgr.L01935 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.3e-08 63.9 60 50.0
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 4.8e-08 62.0 104 29.8
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 6.3e-08 61.6 52 53.8
Medtr2g037105 Medicago truncatula HOM05D018581 ORTHO05D005549 8.2e-08 61.2 92 35.9
Ciclev10009861m.g Citrus clementina HOM05D009688 ORTHO05D005549 1.1e-07 60.8 111 34.2
Medtr2g041360 Medicago truncatula HOM05D009822 ORTHO05D011160 1.1e-07 60.8 101 37.6
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.8e-07 60.1 119 29.4
Medtr2g037190 Medicago truncatula HOM05D018581 ORTHO05D005549 2.4e-07 59.7 109 34.9
Medtr2g037665 Medicago truncatula HOM05D018581 ORTHO05D005549 2.4e-07 59.7 92 35.9


User provided reference genes

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