Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 3.8e-80 301.6 169 100.0
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 3.1e-66 255.4 168 84.5
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 3.1e-66 255.4 168 84.5
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.0e-65 252.7 174 83.9
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 2.2e-64 249.2 168 76.8
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 2.2e-64 249.2 168 76.8
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 1.6e-62 243.0 170 81.2
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.1e-60 236.9 143 83.2
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.3e-59 233.4 170 72.4
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 3.7e-59 231.9 171 72.5
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 4.8e-59 231.5 164 73.2
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 2.0e-33 146.4 164 51.8
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.7e-33 146.0 157 52.2
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 3.5e-33 145.6 139 55.4
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 5.9e-33 144.8 139 55.4
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 5.9e-33 144.8 139 55.4
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 7.8e-33 144.4 139 54.7
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 2.3e-32 142.9 139 54.7
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.6e-30 136.7 173 46.2
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.8e-30 136.0 155 45.8
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.8e-30 136.0 176 46.0
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 4.7e-30 135.2 159 48.4
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 6.1e-30 134.8 152 48.7
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 8.0e-30 134.4 147 49.0
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.2e-28 130.6 128 53.9
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 3.7e-27 125.6 146 47.3
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 6.4e-27 124.8 172 43.6
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 6.4e-27 124.8 152 48.0
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 8.3e-27 124.4 152 48.0
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 8.3e-27 124.4 136 52.2
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 1.9e-26 123.2 132 49.2
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 2.4e-26 122.9 152 47.4
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 2.7e-25 119.4 152 46.7
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 3.5e-25 119.0 132 49.2
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 6.6e-24 114.8 129 45.7
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 1.2e-22 110.5 139 44.6
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.2e-22 110.5 139 42.4
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 6.2e-22 108.2 141 43.3
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 3.1e-21 105.9 133 43.6
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.1e-21 105.9 146 39.7
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 3.1e-21 105.9 146 39.7
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 6.8e-21 104.8 128 42.2
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 1.2e-20 104.0 146 39.0
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 1.2e-20 104.0 144 41.7
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 2.0e-20 103.2 128 41.4
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 2.0e-20 103.2 128 42.2
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 3.4e-20 102.4 128 39.8
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 4.4e-20 102.1 133 43.6
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 4.4e-20 102.1 147 36.1
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.8e-20 101.7 128 40.6
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 5.8e-20 101.7 131 42.0
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 1.3e-19 100.5 141 37.6
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.3e-19 100.5 146 39.7
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 1.7e-19 100.1 132 40.2
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 3.7e-19 99.0 126 40.5
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 8.3e-19 97.8 133 39.1
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 8.3e-19 97.8 145 38.6
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 8.3e-19 97.8 129 38.8
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.1e-18 97.4 129 41.9
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 1.4e-18 97.1 138 39.1
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 2.4e-18 96.3 131 39.7
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 3.2e-18 95.9 135 40.7
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 7.0e-18 94.7 139 36.0
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 7.0e-18 94.7 135 38.5
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 7.0e-18 94.7 130 40.8
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 9.2e-18 94.4 101 44.6
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 9.2e-18 94.4 130 39.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 1.2e-17 94.0 130 40.8
C07p57610 Brassica napus HOM05D005423 ORTHO05D006223 1.6e-17 93.6 132 41.7
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 1.6e-17 93.6 139 35.3
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 2.7e-17 92.8 130 38.5
Carub.0007s1174 Capsella rubella HOM05D005423 ORTHO05D006223 3.5e-17 92.4 139 39.6
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 3.5e-17 92.4 140 34.3
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 4.6e-17 92.0 128 39.8
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 6.0e-17 91.7 133 36.8
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 6.0e-17 91.7 129 35.7
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 7.8e-17 91.3 141 33.3
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 1.0e-16 90.9 145 34.5
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.3e-16 90.5 136 35.3
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.3e-16 90.5 136 35.3
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 1.3e-16 90.5 130 40.8
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 2.3e-16 89.7 65 66.2
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.3e-16 89.7 136 36.0
BolC7t46226H Brassica oleracea HOM05D005423 ORTHO05D006223 3.0e-16 89.4 132 40.2
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.9e-16 89.0 136 34.6
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 5.1e-16 88.6 131 38.2
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 5.1e-16 88.6 159 35.2
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.6e-16 88.2 136 35.3
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 6.6e-16 88.2 137 33.6
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 1.5e-15 87.0 65 63.1
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 1.5e-15 87.0 133 36.1
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.3e-15 85.5 88 45.5
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.3e-15 84.7 88 44.3
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 9.5e-15 84.3 131 35.9
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.6e-14 83.6 92 50.0
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 1.6e-14 83.6 141 32.6
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 2.8e-14 82.8 142 34.5
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 2.8e-14 82.8 100 42.0
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 2.8e-14 82.8 100 42.0
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 3.6e-14 82.4 138 37.7
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.4e-13 80.5 135 34.8
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 3.1e-13 79.3 103 38.8
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 6.8e-13 78.2 82 42.7
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 8.9e-13 77.8 77 53.2
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 1.2e-12 77.4 142 33.1
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.0e-12 76.6 134 32.8
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 2.0e-12 76.6 152 30.9
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.4e-12 75.9 132 35.6
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 1.1e-10 70.9 53 64.2
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 9.2e-10 67.8 80 38.8
C09p04090 Brassica napus HOM05D005423 ORTHO05D006223 6.0e-09 65.1 50 60.0
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 6.6e-08 61.6 120 31.7
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 1.1e-07 60.8 90 40.0
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 2.5e-07 59.7 87 37.9
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 4.3e-07 58.9 94 38.3
Thhalv10027213m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 7.3e-07 58.2 44 68.2
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.6e-06 57.0 69 36.2
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 3.6e-06 55.8 87 40.2


User provided reference genes

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