Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.6e-89 332.8 177 100.0
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 2.2e-86 322.4 177 95.5
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.1e-85 320.1 177 95.5
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.3e-83 313.2 175 91.4
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.9e-83 312.0 177 92.7
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.9e-83 312.0 177 92.7
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 2.5e-82 308.9 177 92.7
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.2e-81 306.6 177 92.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.2e-81 306.6 177 92.1
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.7e-81 304.7 177 91.0
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.0e-80 303.5 177 89.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.8e-80 302.8 177 89.3
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.8e-80 302.8 178 90.4
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 2.3e-80 302.4 177 86.4
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-79 299.7 177 88.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 2.0e-79 299.3 177 88.1
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.9e-78 294.7 177 84.2
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 5.0e-75 284.6 177 83.6
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 2.8e-73 278.9 177 79.1
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 8.0e-73 277.3 177 79.1
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.4e-72 276.6 177 79.1
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 6.8e-72 274.2 177 79.7
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 8.9e-72 273.9 177 79.7
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.9e-72 273.9 177 81.4
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.5e-71 273.1 177 78.5
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.5e-71 273.1 168 83.3
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.0e-71 272.7 163 85.9
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 2.6e-71 272.3 161 85.1
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 5.8e-71 271.2 178 75.3
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 7.5e-71 270.8 177 79.1
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.8e-71 270.4 177 76.8
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 9.8e-71 270.4 177 76.8
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.3e-70 270.0 177 79.7
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 2.9e-70 268.9 177 75.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.7e-70 268.5 177 78.0
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.7e-70 268.5 177 75.1
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.9e-70 268.1 177 76.3
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.9e-70 268.1 177 76.3
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 4.9e-70 268.1 177 76.3
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 6.4e-70 267.7 177 77.4
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.3e-70 267.3 177 76.8
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.9e-69 266.2 179 77.7
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 3.2e-69 265.4 177 78.0
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.2e-69 263.8 162 81.5
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.0e-68 262.7 175 75.4
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.0e-68 262.7 175 76.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 4.6e-68 261.5 167 82.0
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 6.0e-68 261.2 175 74.9
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 6.0e-68 261.2 177 76.8
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 7.8e-68 260.8 175 74.3
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 7.8e-68 260.8 170 78.2
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.0e-67 260.4 171 77.8
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-67 260.0 174 77.6
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.3e-67 260.0 154 83.8
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.3e-67 260.0 177 75.1
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.3e-67 260.0 179 75.4
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.3e-67 260.0 166 76.5
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.7e-67 259.6 174 77.6
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.7e-67 259.6 178 74.7
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.7e-67 259.6 173 76.3
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 2.3e-67 259.2 175 74.9
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.3e-67 259.2 174 77.6
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 2.3e-67 259.2 180 71.7
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 2.3e-67 259.2 180 71.7
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 2.3e-67 259.2 180 71.7
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.0e-67 258.8 175 74.3
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 3.9e-67 258.5 179 74.9
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 3.9e-67 258.5 179 74.9
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 5.0e-67 258.1 176 74.4
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 6.6e-67 257.7 179 73.2
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 6.6e-67 257.7 179 73.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 8.6e-67 257.3 177 75.7
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 8.6e-67 257.3 176 72.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 8.6e-67 257.3 177 72.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.9e-66 256.1 169 75.1
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.9e-66 256.1 177 74.0
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 2.5e-66 255.8 151 84.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 3.3e-66 255.4 177 73.4
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.3e-66 255.4 174 75.9
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.6e-66 254.6 179 72.6
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 7.3e-66 254.2 160 81.2
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 9.5e-66 253.8 179 72.6
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.2e-65 253.4 177 73.4
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.8e-65 252.3 153 81.7
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.1e-64 250.4 153 79.7
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.4e-64 250.0 178 70.2
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.4e-64 250.0 177 74.0
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.8e-64 249.6 178 71.9
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 3.1e-64 248.8 177 73.4
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 6.8e-64 247.7 151 80.1
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 6.8e-64 247.7 177 72.3
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.5e-63 246.5 153 81.0
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.5e-63 246.5 158 77.8
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.6e-63 245.7 153 80.4
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.9e-62 241.5 176 71.6
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.9e-61 239.6 176 68.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 3.2e-61 238.8 142 82.4
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 3.2e-61 238.8 164 73.2
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 7.1e-61 237.7 176 69.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.1e-60 236.1 176 68.2
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.6e-60 235.0 151 76.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.6e-60 235.0 174 68.4
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.0e-59 233.8 174 66.1
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.6e-57 226.5 156 75.6
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.8e-56 223.0 167 68.3
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.3e-56 222.6 156 71.2
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 3.1e-56 222.2 145 75.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.4e-55 218.4 137 75.9
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.9e-53 213.0 152 72.4
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.7e-52 209.1 131 80.2
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 6.6e-51 204.5 155 67.1
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.2e-49 200.3 153 63.4
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.8e-49 199.1 154 66.9
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 6.2e-49 198.0 118 83.1
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 3.1e-48 195.7 120 81.7
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.1e-48 195.7 129 76.0
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 2.2e-46 189.5 129 79.8
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 6.4e-46 188.0 152 63.8
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.9e-45 186.4 121 80.2
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 3.5e-44 182.2 131 67.2
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 6.0e-44 181.4 108 83.3
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.0e-43 180.6 107 82.2
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 3.0e-43 179.1 107 81.3
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.4e-32 142.9 91 76.9
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 2.4e-29 132.9 123 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.2e-17 91.3 106 54.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.3e-09 67.4 119 44.5


User provided reference genes

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