Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.4e-56 221.1 113 100.0
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.1e-54 216.5 113 97.3
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.8e-54 215.7 113 97.3
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 2.4e-54 215.3 113 97.3
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 3.1e-54 214.9 113 95.6
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 5.3e-54 214.2 113 96.5
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 7.0e-54 213.8 113 95.6
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 7.0e-54 213.8 113 94.7
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 7.0e-54 213.8 113 94.7
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 7.0e-54 213.8 113 94.7
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.2e-53 213.0 112 95.5
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 8.5e-52 206.8 112 92.9
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.2e-48 196.4 113 85.0
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.5e-48 196.1 113 85.0
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.5e-48 196.1 113 85.0
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 4.4e-48 194.5 113 84.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 9.7e-48 193.4 113 85.8
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.3e-47 193.0 113 83.2
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.7e-47 192.6 113 83.2
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 2.2e-47 192.2 113 85.0
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.8e-47 191.8 113 83.2
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 2.8e-47 191.8 113 83.2
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 3.7e-47 191.4 113 82.3
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.7e-47 191.4 113 82.3
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 3.7e-47 191.4 113 82.3
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 4.8e-47 191.0 113 82.3
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.8e-47 191.0 113 82.3
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.8e-47 191.0 113 84.1
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 6.3e-47 190.7 112 83.0
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.3e-47 190.7 113 81.4
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.1e-46 189.9 113 85.8
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.1e-46 189.9 113 81.4
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.1e-46 189.9 113 83.2
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.1e-46 189.9 113 83.2
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.1e-46 189.9 113 81.4
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.4e-46 189.5 113 82.3
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.4e-46 189.5 113 84.1
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.4e-46 189.5 113 81.4
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.4e-46 189.5 113 82.3
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.4e-46 189.5 113 83.2
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.4e-46 189.5 113 83.2
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.8e-46 189.1 113 84.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.8e-46 189.1 113 80.5
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.8e-46 189.1 113 82.3
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.4e-46 188.7 112 81.2
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.1e-46 188.3 113 83.2
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.1e-46 188.3 113 80.5
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 5.3e-46 187.6 98 93.9
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 5.3e-46 187.6 112 82.1
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 5.3e-46 187.6 113 82.3
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 7.0e-46 187.2 113 79.6
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 9.1e-46 186.8 113 80.5
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.2e-45 186.4 113 83.2
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.2e-45 186.4 113 81.4
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.2e-45 186.4 113 81.4
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.2e-45 186.4 113 80.5
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.6e-45 186.0 113 81.4
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 2.0e-45 185.7 113 83.2
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.7e-45 185.3 112 81.2
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 2.7e-45 185.3 113 79.6
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.7e-45 185.3 113 82.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 3.5e-45 184.9 112 82.1
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.5e-45 184.9 112 82.1
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 5.9e-45 184.1 113 79.6
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 5.9e-45 184.1 113 78.8
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 5.9e-45 184.1 112 79.5
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 7.7e-45 183.7 112 81.2
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.7e-44 182.6 113 79.6
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.7e-44 182.6 113 82.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.2e-44 182.2 113 81.4
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.9e-44 181.8 113 79.6
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.9e-44 181.8 113 79.6
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.9e-44 181.8 122 79.5
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 3.8e-44 181.4 113 78.8
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 5.0e-44 181.0 113 81.4
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 6.5e-44 180.6 113 80.5
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.9e-43 179.1 112 78.6
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 2.5e-43 178.7 113 78.8
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.5e-43 178.7 113 79.6
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.2e-43 178.3 113 77.9
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 5.5e-43 177.6 113 77.0
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 7.2e-43 177.2 112 80.4
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 2.7e-42 175.3 113 75.2
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 8.0e-42 173.7 113 76.1
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.0e-41 171.4 105 80.0
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 6.8e-41 170.6 139 66.2
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.0e-40 169.1 98 82.7
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 2.6e-40 168.7 98 81.6
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 5.7e-40 167.5 98 80.6
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 1.7e-39 166.0 113 76.1
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.2e-39 165.6 98 83.7
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.2e-39 165.6 98 79.6
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.7e-39 164.9 98 78.6
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 3.7e-39 164.9 98 80.6
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.4e-38 162.2 113 72.6
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 4.1e-38 161.4 113 71.7
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.2e-37 159.8 113 71.7
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.0e-36 156.8 112 69.6
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.7e-36 156.0 113 76.1
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.1e-35 153.3 113 72.6
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.5e-35 152.9 97 76.3
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.9e-35 152.5 111 68.5
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.8e-34 148.7 86 81.4
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 6.1e-34 147.5 113 71.7
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.0e-33 146.7 113 71.7
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.8e-33 146.0 79 88.6
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.0e-33 145.2 113 70.8
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.1e-30 136.7 91 72.5
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.3e-28 129.8 98 70.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 2.3e-28 129.0 98 69.4
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.9e-27 125.9 85 71.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 7.0e-22 107.5 113 54.9
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.0e-20 103.6 102 51.0
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.3e-20 102.4 81 66.7
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 3.6e-18 95.1 76 61.8
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 7.5e-16 87.4 103 42.7
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.4e-14 83.2 87 57.5
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 5.4e-14 81.3 91 49.5
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 7.3e-11 70.9 48 64.6


User provided reference genes

Program Settings