Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.3e-80 303.1 162 100.0
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 4.0e-63 245.0 161 82.0
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 7.6e-62 240.7 162 82.7
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.7e-61 239.6 164 81.1
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 4.9e-61 238.0 165 81.2
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 8.4e-61 237.3 163 80.4
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 3.2e-60 235.3 165 80.6
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 2.1e-59 232.6 162 80.2
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 3.5e-59 231.9 165 79.4
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 4.6e-59 231.5 164 81.1
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.6e-59 231.5 161 81.4
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 4.6e-59 231.5 161 81.4
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.8e-58 229.6 163 79.1
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 3.0e-58 228.8 164 79.3
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.3e-50 203.4 164 72.6
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 2.2e-48 196.1 117 88.0
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.9e-44 183.0 162 67.9
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.8e-37 158.7 159 61.0
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.9e-34 148.7 154 61.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 9.7e-33 144.1 143 58.0
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 1.4e-31 140.2 159 56.6
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 2.4e-31 139.4 130 57.7
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 5.3e-31 138.3 152 55.9
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.6e-30 136.7 121 62.0
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 4.5e-30 135.2 149 55.0
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 7.7e-30 134.4 129 57.4
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.3e-29 133.7 121 61.2
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.7e-29 133.3 129 55.0
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.7e-29 133.3 115 60.0
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.8e-29 132.1 114 64.0
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 3.8e-29 132.1 113 60.2
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 5.0e-29 131.7 159 50.3
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 6.5e-29 131.3 112 62.5
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 6.5e-29 131.3 137 56.9
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 6.5e-29 131.3 112 61.6
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 8.5e-29 131.0 112 62.5
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.5e-29 131.0 112 63.4
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 8.5e-29 131.0 112 62.5
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 8.5e-29 131.0 111 64.9
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.1e-28 130.6 137 56.9
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 1.1e-28 130.6 135 58.5
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.5e-28 130.2 136 56.6
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.5e-28 130.2 108 65.7
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 2.5e-28 129.4 108 66.7
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 3.2e-28 129.0 126 57.1
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 4.2e-28 128.6 110 64.5
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 2.7e-27 125.9 112 60.7
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 2.7e-27 125.9 112 59.8
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 3.6e-27 125.6 137 54.7
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 4.7e-27 125.2 139 53.2
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 4.7e-27 125.2 139 52.5
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 6.1e-27 124.8 112 61.6
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 8.0e-27 124.4 140 53.6
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 8.0e-27 124.4 112 59.8
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 8.0e-27 124.4 136 52.9
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.0e-26 124.0 126 57.9
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 1.4e-26 123.6 120 60.8
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 6.7e-26 121.3 95 70.5
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 8.8e-26 120.9 113 58.4
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 8.8e-26 120.9 109 58.7
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.0e-25 119.8 113 56.6
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 2.0e-25 119.8 100 65.0
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 2.6e-25 119.4 103 65.0
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.3e-24 117.1 134 53.0
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.7e-24 116.7 99 67.7
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.8e-24 115.9 88 65.9
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 2.8e-24 115.9 81 70.4
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 4.8e-24 115.2 114 54.4
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 6.3e-24 114.8 111 60.4
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.1e-23 114.0 133 55.6
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 1.4e-23 113.6 158 45.6
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.8e-23 113.2 112 56.2
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 5.3e-23 111.7 112 54.5
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 9.1e-23 110.9 138 50.7
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 2.0e-22 109.8 152 48.0
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 2.7e-22 109.4 124 54.8
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 3.5e-22 109.0 145 45.5
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 4.5e-22 108.6 61 86.9
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 4.5e-22 108.6 107 56.1
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.0e-21 107.5 79 69.6
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.3e-21 107.1 82 63.4
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.3e-21 107.1 96 62.5
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.7e-21 106.7 144 48.6
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.7e-21 106.7 89 68.5
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.7e-21 106.7 144 47.2
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.7e-21 106.7 111 55.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 2.2e-21 106.3 133 52.6
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 8.5e-21 104.4 159 45.3
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 9.4e-20 100.9 154 42.9
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.2e-19 100.5 157 41.4
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 4.7e-19 98.6 72 69.4
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 8.0e-19 97.8 70 70.0
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.0e-18 97.4 100 57.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 4.0e-18 95.5 73 67.1
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 6.8e-18 94.7 86 62.8
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 1.5e-17 93.6 72 61.1
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.0e-17 93.2 72 68.1
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 4.4e-17 92.0 95 54.7
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.7e-16 90.1 135 43.7
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 3.1e-15 85.9 157 38.9
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.6e-14 83.6 63 66.7
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 2.0e-14 83.2 88 51.1
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 1.0e-13 80.9 80 63.8
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.3e-13 80.5 129 38.8
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.3e-13 80.5 140 43.6
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 2.2e-13 79.7 122 44.3
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.5e-12 77.0 75 56.0
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 5.7e-09 65.1 47 59.6
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 6.3e-08 61.6 92 45.7


User provided reference genes

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