Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 7.0e-127 457.2 220 100.0
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.2e-110 403.3 198 96.0
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 1.9e-108 396.0 201 93.5
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 4.0e-106 388.3 198 92.9
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.2e-105 386.7 200 90.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 4.4e-105 384.8 200 91.5
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 9.9e-105 383.6 198 92.4
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.6e-102 376.3 200 90.0
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.6e-102 376.3 200 90.0
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 3.5e-102 375.2 201 89.6
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 8.7e-101 370.5 202 87.6
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 3.4e-89 332.0 198 79.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 1.4e-74 283.5 197 66.0
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 2.6e-73 279.3 199 65.8
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 7.6e-73 277.7 198 67.2
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.9e-72 275.8 197 64.5
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 2.9e-72 275.8 197 64.5
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.8e-72 275.4 197 64.5
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.5e-71 272.7 197 64.0
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 2.5e-71 272.7 200 65.5
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.5e-71 272.7 204 63.7
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 7.2e-71 271.2 198 63.6
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 7.2e-71 271.2 200 64.5
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 2.1e-70 269.6 209 62.2
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.1e-70 269.6 197 67.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.8e-69 266.5 198 63.1
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.8e-69 266.5 198 65.7
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 3.9e-69 265.4 197 62.4
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 3.9e-69 265.4 197 64.5
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 3.9e-69 265.4 200 63.5
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.5e-68 263.5 210 60.5
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.5e-68 263.5 210 59.5
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.5e-68 263.5 198 62.6
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.5e-68 262.7 197 61.9
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 2.5e-68 262.7 198 63.1
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 4.3e-68 261.9 197 63.5
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.3e-68 261.9 203 61.6
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.3e-67 260.4 199 62.3
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 1.3e-67 260.4 198 62.6
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.2e-67 259.6 197 61.9
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 2.8e-67 259.2 197 62.9
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.8e-67 259.2 204 59.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.8e-67 259.2 204 60.8
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 3.7e-67 258.8 197 64.5
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 3.7e-67 258.8 201 62.2
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 3.7e-67 258.8 197 61.9
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.7e-67 258.8 197 61.9
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 4.8e-67 258.5 198 61.1
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 4.8e-67 258.5 242 53.3
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 8.2e-67 257.7 201 61.7
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.1e-66 257.3 200 61.5
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 1.8e-66 256.5 195 62.1
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 4.1e-66 255.4 197 61.9
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.1e-66 255.4 182 64.3
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 4.1e-66 255.4 197 62.4
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 9.0e-66 254.2 205 60.5
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.5e-65 253.4 197 61.4
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 3.4e-65 252.3 203 58.6
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.3e-64 250.4 198 61.1
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 2.9e-64 249.2 197 62.4
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.9e-64 249.2 197 62.9
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.8e-64 248.8 213 58.7
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 3.8e-64 248.8 198 59.6
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 8.5e-64 247.7 197 60.4
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.1e-63 247.3 197 58.9
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.2e-63 245.4 197 59.9
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 4.2e-63 245.4 197 61.9
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.2e-62 243.8 219 54.8
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.6e-62 242.3 206 55.8
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 3.6e-62 242.3 197 60.4
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.4e-61 240.4 196 59.2
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.8e-61 240.0 197 58.4
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.0e-61 239.2 177 64.4
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.7e-61 238.0 199 58.3
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 8.8e-61 237.7 197 59.4
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.5e-60 236.9 195 58.5
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.8e-59 231.9 162 71.0
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.8e-58 229.9 198 57.1
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 2.4e-58 229.6 197 56.3
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 4.5e-57 225.3 199 51.3
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 5.9e-57 224.9 201 55.7
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 5.9e-57 224.9 197 55.3
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 1.0e-56 224.2 188 57.4
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.9e-55 219.9 228 50.9
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.4e-52 208.8 132 66.7
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 7.7e-49 198.0 164 56.7
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 2.9e-48 196.1 200 53.5
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.8e-48 195.7 172 55.8
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.1e-47 194.1 204 50.0
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.5e-47 193.0 140 61.4
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 3.3e-44 182.6 148 58.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-42 177.6 212 48.1
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 8.5e-40 167.9 163 52.8
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 2.5e-39 166.4 151 59.6
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.2e-35 153.3 168 49.4
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.5e-33 145.6 135 50.4
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 4.7e-30 135.6 107 57.0
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.0e-29 134.4 138 47.1
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 7.0e-26 121.7 132 47.7
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 2.5e-23 113.2 100 60.0
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 1.4e-21 107.5 162 35.8
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 3.4e-20 102.8 67 65.7
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 9.8e-20 101.3 88 63.6
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 6.4e-19 98.6 166 34.9
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 2.4e-18 96.7 58 79.3
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 2.4e-18 96.7 58 79.3
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.6e-17 94.0 167 35.3
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.0e-17 93.6 54 75.9
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.8e-17 91.7 74 63.5
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 2.0e-12 77.0 48 66.7
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 1.1e-10 71.2 88 50.0
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 2.0e-09 67.0 204 27.5
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 7.8e-09 65.1 44 70.5
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.1e-07 61.2 41 58.5
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.5e-07 60.8 77 50.6
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 1.2e-06 57.8 54 59.3
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 1.6e-06 57.4 30 73.3
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.6e-06 57.4 35 68.6


User provided reference genes

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