Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 0.0e+00 1460.7 760 100.0
BcaB03g12481 Brassica carinata HOM05D008661 ORTHO05D010872 2.8e-308 1061.6 761 75.3
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 6.7e-302 1040.4 759 75.4
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 2.0e-301 1038.9 760 74.1
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 2.2e-292 1008.8 742 72.9
BcaB03g12479 Brassica carinata HOM05D008661 ORTHO05D010872 1.1e-291 1006.5 743 72.9
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 1.8e-291 1005.7 767 71.2
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 2.0e-290 1002.3 771 71.5
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 2.9e-289 998.4 762 71.5
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 3.8e-289 998.0 767 70.8
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 3.8e-289 998.0 767 70.8
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 1.6e-282 976.1 742 71.4
Carub.0238s0001 Capsella rubella HOM05D008661 ORTHO05D010872 1.8e-278 962.6 720 71.8
Thhalv10024596m.g Eutrema salsugineum HOM05D008661 ORTHO05D010872 3.6e-255 885.2 572 80.9
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 3.9e-217 758.8 779 59.1
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 2.9e-212 742.7 785 58.0
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 9.0e-198 694.5 771 56.4
AT5G52530 Arabidopsis thaliana HOM05D008661 ORTHO05D010872 9.1e-190 667.9 778 54.6
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 2.7e-186 656.4 488 72.5
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 2.0e-176 623.6 785 52.4
Carub.0008s1265 Capsella rubella HOM05D008661 ORTHO05D010872 4.9e-159 565.8 769 50.1
Sp6g14700 Schrenkiella parvula HOM05D008661 ORTHO05D010872 8.3e-135 485.3 824 44.5
BcaB08g35607 Brassica carinata HOM05D008661 ORTHO05D010872 3.1e-89 334.0 783 38.1
BcaC04g20573 Brassica carinata HOM05D008661 ORTHO05D010872 3.2e-86 323.9 774 38.1
BolC9t57083H Brassica oleracea HOM05D008661 ORTHO05D010872 2.4e-81 307.8 768 37.6
C09p42010 Brassica napus HOM05D008661 ORTHO05D010872 7.7e-80 302.8 768 37.4
BraA10t43090Z Brassica rapa HOM05D008661 ORTHO05D010872 3.9e-76 290.4 767 36.8
C09p42020 Brassica napus HOM05D008661 ORTHO05D010872 2.2e-71 274.6 777 35.5
BolC9t57085H Brassica oleracea HOM05D008661 ORTHO05D010872 2.2e-71 274.6 777 35.5
BcaC04g20572 Brassica carinata HOM05D008661 ORTHO05D010872 6.5e-71 273.1 762 35.6
A10p10120 Brassica napus HOM05D008661 ORTHO05D010872 2.3e-68 264.6 766 34.7
BraA10t43092Z Brassica rapa HOM05D008661 ORTHO05D010872 1.1e-67 262.3 766 35.0
BcaC04g20566 Brassica carinata HOM05D008661 ORTHO05D010872 3.5e-64 250.8 769 34.7
A10p10090 Brassica napus HOM05D008661 ORTHO05D010872 8.8e-60 236.1 767 34.0
A10p10100 Brassica napus HOM05D008661 ORTHO05D010872 8.2e-58 229.6 769 33.9
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 4.1e-49 200.7 913 30.7
A10p10130 Brassica napus HOM05D008661 ORTHO05D010872 5.2e-44 183.7 764 31.7
BraA10t43093Z Brassica rapa HOM05D008661 ORTHO05D010872 2.4e-41 174.9 764 31.2
BolC9t57086H Brassica oleracea HOM05D008661 ORTHO05D010872 5.2e-36 157.1 765 30.3
BcaC04g20571 Brassica carinata HOM05D008661 ORTHO05D010872 2.9e-34 151.4 388 35.1
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 2.7e-32 144.8 950 28.6
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 7.8e-32 143.3 945 28.3
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.9e-31 141.0 945 28.3
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 8.6e-31 139.8 1063 26.7
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.1e-30 139.4 1052 27.2
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.3e-30 137.5 1063 26.6
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 9.5e-30 136.3 457 33.7
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 2.8e-29 134.8 721 29.1
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.8e-29 134.8 1020 25.8
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.6e-29 134.4 1062 26.5
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 3.6e-29 134.4 1066 26.5
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 3.6e-29 134.4 1013 25.4
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 4.7e-29 134.0 1066 26.8
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 6.2e-29 133.7 1060 26.8
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.9e-28 129.8 1049 26.8
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 9.8e-27 126.3 1044 25.8
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 9.8e-27 126.3 1044 25.8
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.7e-26 124.4 1057 26.8
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 6.4e-26 123.6 1054 26.5
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 8.3e-26 123.2 1044 25.7
C09p42030 Brassica napus HOM05D008661 ORTHO05D010872 7.0e-25 120.2 436 33.3
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 1.0e-23 116.3 450 33.1
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 5.0e-23 114.0 447 32.2
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 1.9e-22 112.1 371 32.6
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.9e-22 112.1 403 30.0
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 2.8e-21 108.2 371 31.8
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 6.2e-21 107.1 371 31.0
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 2.3e-20 105.1 380 31.3
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 3.1e-20 104.8 1099 24.7
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 4.0e-20 104.4 1012 26.6
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 2.0e-19 102.1 393 28.8
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 2.6e-19 101.7 410 28.3
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 4.4e-19 100.9 353 28.6
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 2.2e-18 98.6 354 28.5
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 8.3e-18 96.7 437 28.8
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 8.3e-18 96.7 467 31.0
BcaC04g20567 Brassica carinata HOM05D008661 ORTHO05D010872 1.4e-17 95.9 440 28.4
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.9e-17 95.5 480 30.6
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 3.2e-17 94.7 1032 26.0
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 5.4e-17 94.0 384 27.1
BcaC04g20569 Brassica carinata HOM05D008661 ORTHO05D010872 7.1e-17 93.6 352 31.0
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.5e-16 91.3 389 28.8
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 7.8e-16 90.1 431 32.3
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 1.0e-15 89.7 364 27.7
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 5.1e-15 87.4 380 28.9
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 5.1e-15 87.4 380 28.9
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 1.1e-14 86.3 354 29.4
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.1e-14 86.3 397 27.5
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 1.5e-14 85.9 364 28.6
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 3.3e-14 84.7 246 30.9
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 5.6e-14 84.0 335 28.1
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 5.6e-14 84.0 382 26.7
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 7.3e-14 83.6 368 28.5
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 6.2e-13 80.5 380 25.8
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 4.0e-12 77.8 373 27.3
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 4.0e-12 77.8 523 25.2
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 4.0e-12 77.8 356 27.5
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 5.2e-12 77.4 363 24.8
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 1.5e-11 75.9 173 36.4
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.4e-11 74.7 288 28.8
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 5.8e-11 73.9 363 28.1
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 9.9e-11 73.2 366 27.3
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 1.7e-10 72.4 341 28.2
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 2.2e-10 72.0 997 24.8
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 3.8e-10 71.2 375 26.9
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 4.9e-10 70.9 414 24.6
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 6.4e-10 70.5 350 26.9
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 6.4e-10 70.5 534 24.2
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 8.4e-10 70.1 368 25.8
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.4e-09 69.3 370 27.3
THA.LOC104823530 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 3.2e-09 68.2 65 63.1
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 4.1e-09 67.8 288 28.1
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 4.1e-09 67.8 820 24.8
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 4.1e-09 67.8 359 29.5
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 7.1e-09 67.0 365 27.1
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 9.2e-09 66.6 413 27.8
HanXRQChr09g0252481 Helianthus annuus HOM05D029832 ORTHO05D007753 1.2e-08 66.2 543 26.0
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.1e-08 65.5 286 29.0
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 2.7e-08 65.1 513 26.7
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 7.8e-08 63.5 371 28.0
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 7.8e-08 63.5 1060 23.5
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 7.8e-08 63.5 306 26.8
Lsat_1_v5_gn_9_57440 Lactuca sativa HOM05D006627 ORTHO05D007753 1.0e-07 63.2 635 23.5
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 1.3e-07 62.8 309 27.2
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.9e-07 61.2 290 26.2
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 3.9e-07 61.2 193 34.7
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 5.1e-07 60.8 347 25.4
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 1.1e-06 59.7 276 29.3
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 9.6e-06 56.6 364 25.0


User provided reference genes

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