Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 3.1e-168 595.1 313 100.0
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 2.5e-162 575.5 313 95.2
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.5e-159 566.2 313 93.6
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 3.4e-159 565.1 313 93.6
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 4.5e-159 564.7 313 93.6
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.4e-157 559.7 313 93.6
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 2.4e-157 558.9 313 93.0
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 2.4e-157 558.9 313 92.3
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.6e-156 556.2 313 93.0
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.3e-155 553.1 314 92.0
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.3e-155 552.4 314 92.0
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.9e-155 551.6 314 92.4
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 6.7e-155 550.8 314 91.7
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 6.7e-155 550.8 314 91.7
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 1.5e-154 549.7 314 91.7
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.8e-153 545.4 313 92.0
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.3e-150 536.6 313 89.5
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.9e-126 455.7 309 75.4
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 5.0e-126 454.9 324 74.4
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.1e-125 453.8 310 75.5
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.5e-125 452.6 312 75.0
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-124 450.3 312 74.7
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.6e-124 449.9 312 74.4
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 2.0e-122 443.0 279 79.6
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 3.3e-122 442.2 279 79.6
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 9.7e-122 440.7 278 79.9
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.3e-121 440.3 317 75.1
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 6.3e-121 438.0 314 72.6
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 8.2e-121 437.6 288 76.7
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 2.4e-120 436.0 288 77.1
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.2e-119 433.7 320 71.6
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.5e-119 433.3 314 72.6
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.6e-119 432.6 304 73.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.6e-119 432.6 321 69.8
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 4.5e-119 431.8 269 79.9
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.5e-119 431.8 269 79.9
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 4.5e-119 431.8 315 72.1
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 4.5e-119 431.8 302 73.5
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 5.9e-119 431.4 282 76.6
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 7.7e-119 431.0 289 76.1
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 1.0e-118 430.6 302 73.5
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.0e-118 430.6 304 73.4
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.0e-118 430.6 314 71.0
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.0e-118 430.6 269 79.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.0e-118 430.6 331 69.8
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 1.7e-118 429.9 298 73.2
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.7e-118 429.9 299 73.6
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.2e-118 429.5 311 71.4
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 2.2e-118 429.5 272 78.3
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 2.9e-118 429.1 279 77.4
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 2.9e-118 429.1 299 73.6
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.9e-118 429.1 273 78.8
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.9e-118 429.1 270 78.5
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.5e-118 427.9 268 78.7
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 8.5e-118 427.6 316 71.2
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.1e-117 427.2 276 76.4
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.4e-117 426.8 299 72.9
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.4e-117 426.8 309 69.6
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 2.5e-117 426.0 316 69.9
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 2.5e-117 426.0 311 71.4
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 2.5e-117 426.0 280 77.5
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 2.5e-117 426.0 280 78.2
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 3.2e-117 425.6 283 76.3
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 5.5e-117 424.9 297 73.1
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 5.5e-117 424.9 322 69.6
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 7.2e-117 424.5 307 70.7
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 9.4e-117 424.1 271 78.2
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 9.4e-117 424.1 303 73.6
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.6e-116 423.3 319 70.2
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 3.6e-116 422.2 287 75.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 3.6e-116 422.2 281 76.2
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 3.6e-116 422.2 292 74.0
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 8.0e-116 421.0 299 73.2
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 8.0e-116 421.0 303 72.3
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.0e-115 420.6 303 72.3
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 3.9e-115 418.7 294 73.5
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 3.9e-115 418.7 323 68.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.1e-114 417.2 285 74.0
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 3.3e-114 415.6 285 74.0
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.8e-113 412.5 287 73.9
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 6.3e-113 411.4 308 69.2
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 4.5e-111 405.2 303 70.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.2e-110 402.9 280 73.2
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 3.8e-110 402.1 231 83.5
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 3.8e-110 402.1 231 83.5
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 9.4e-109 397.5 258 76.7
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 8.0e-108 394.4 323 66.3
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 2.0e-106 389.8 280 71.8
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.4e-106 388.7 317 64.7
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.2e-103 380.6 287 70.4
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.7e-103 379.4 300 67.0
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.2e-102 376.3 295 67.8
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 3.2e-101 372.5 228 79.4
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 4.2e-101 372.1 311 61.7
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.2e-100 370.5 237 76.8
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 3.0e-99 365.9 288 64.9
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 3.0e-99 365.9 307 63.5
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 2.0e-98 363.2 235 73.6
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.6e-98 362.8 231 77.1
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 2.3e-94 349.7 287 62.7
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 8.6e-94 347.8 266 65.4
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 4.7e-92 342.0 277 63.5
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 4.0e-91 339.0 207 81.2
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 2.0e-90 336.7 260 64.6
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.9e-85 320.1 266 59.4
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 4.3e-85 318.9 277 62.1
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 1.8e-83 313.5 246 64.6
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 3.7e-73 279.3 280 53.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.7e-62 243.8 223 62.8
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 3.9e-62 242.7 288 50.3
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.3e-61 239.2 223 57.4
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 2.9e-57 226.5 183 68.9
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.1e-56 224.6 230 57.0
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 4.9e-49 199.1 141 74.5
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.1e-37 161.4 104 68.3
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 3.3e-21 106.7 68 72.1
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 4.8e-20 102.8 74 67.6
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.3e-09 68.2 64 62.5
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.8e-09 66.6 41 73.2
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 3.9e-06 56.6 125 30.4
C07p53990 Brassica napus HOM05D050604 ORTHO05D033303 6.7e-06 55.8 63 54.0
BolC7t45888H Brassica oleracea HOM05D050604 ORTHO05D033303 6.7e-06 55.8 63 54.0


User provided reference genes

Program Settings