Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.5e-122 442.2 235 100.0
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 7.6e-103 377.5 238 87.8
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 2.9e-102 375.6 237 84.4
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 3.8e-102 375.2 238 84.0
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 3.8e-102 375.2 238 84.0
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 2.1e-100 369.4 237 84.8
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 7.3e-98 360.9 235 83.4
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 9.6e-98 360.5 237 80.6
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 6.2e-97 357.8 235 81.7
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.1e-96 355.5 235 82.1
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 2.9e-94 349.0 236 79.2
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.8e-80 303.1 252 67.1
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.0e-78 297.4 235 68.1
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.6e-65 253.4 246 60.6
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.7e-65 252.3 246 60.6
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 6.3e-65 251.5 237 59.5
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.4e-64 250.4 190 67.9
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 5.3e-64 248.4 190 67.9
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.5e-63 246.9 210 61.9
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 4.5e-63 245.4 190 65.8
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 4.5e-63 245.4 239 59.4
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 5.9e-63 245.0 238 58.4
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 5.9e-63 245.0 240 57.9
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 7.7e-63 244.6 189 68.8
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 7.7e-63 244.6 183 67.8
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.3e-62 243.8 238 58.0
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 2.9e-62 242.7 232 57.3
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 6.5e-62 241.5 230 59.1
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 8.5e-62 241.1 237 59.5
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.1e-61 240.7 190 65.3
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 1.9e-61 240.0 188 67.0
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 2.5e-61 239.6 223 58.3
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 4.2e-61 238.8 232 58.6
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 4.2e-61 238.8 192 64.1
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 7.2e-61 238.0 192 65.1
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 7.2e-61 238.0 188 66.5
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 7.2e-61 238.0 190 64.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 7.2e-61 238.0 190 64.2
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 9.4e-61 237.7 188 63.3
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 9.4e-61 237.7 187 64.7
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-60 237.3 231 56.3
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-60 237.3 231 56.3
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 4.6e-60 235.3 191 65.4
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 6.1e-60 235.0 189 65.1
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 7.9e-60 234.6 190 64.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 7.9e-60 234.6 170 71.8
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.0e-59 234.2 190 63.2
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.0e-59 234.2 190 65.8
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.4e-59 233.8 211 58.8
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.8e-59 233.4 190 63.7
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.3e-59 233.0 241 54.8
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.9e-59 232.3 241 54.4
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 5.1e-59 231.9 192 63.0
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 5.1e-59 231.9 189 64.0
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 6.7e-59 231.5 193 63.2
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-58 230.3 231 56.3
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.5e-58 230.3 191 62.8
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 4.3e-58 228.8 190 63.7
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 5.7e-58 228.4 239 54.4
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 5.7e-58 228.4 194 61.9
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 2.8e-57 226.1 202 62.4
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 6.3e-57 224.9 195 61.0
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 6.3e-57 224.9 187 63.1
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 2.4e-56 223.0 280 48.2
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 4.1e-56 222.2 231 53.2
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 9.1e-56 221.1 227 52.9
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 1.2e-55 220.7 188 58.0
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.5e-55 220.3 221 55.2
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.5e-55 220.3 189 58.2
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.6e-55 219.5 187 61.0
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.7e-54 216.9 217 54.8
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 1.7e-54 216.9 189 61.4
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.2e-54 216.5 187 60.4
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 5.0e-54 215.3 191 60.7
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.1e-53 214.2 240 50.4
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.4e-53 213.8 170 63.5
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.9e-53 213.4 181 62.4
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 3.2e-53 212.6 153 65.4
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.6e-52 210.3 181 60.8
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 2.1e-52 209.9 192 57.8
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 3.6e-52 209.1 223 54.7
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 6.1e-52 208.4 178 61.8
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 1.4e-51 207.2 191 59.2
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 2.3e-51 206.5 227 52.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 3.9e-51 205.7 189 57.1
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 2.0e-50 203.4 135 71.1
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 3.1e-48 196.1 137 66.4
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 5.3e-48 195.3 222 50.0
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 7.0e-48 194.9 188 54.8
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 2.6e-42 176.4 149 62.4
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 6.3e-41 171.8 241 44.0
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 4.1e-40 169.1 191 51.3
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 1.8e-35 153.7 167 50.9
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 6.8e-35 151.8 100 70.0
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 9.8e-34 147.9 100 67.0
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 6.5e-30 135.2 177 41.2
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 1.2e-26 124.4 118 60.2
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 5.7e-26 122.1 100 66.0
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.7e-25 120.6 118 58.5
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 4.1e-24 115.9 170 39.4
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.7e-23 113.2 92 72.8
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 4.7e-20 102.4 65 69.2
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.0e-19 99.8 63 73.0
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 7.5e-18 95.1 116 53.4
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.6e-15 87.4 90 47.8
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 1.4e-11 74.3 100 47.0
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 2.6e-10 70.1 60 63.3
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.7e-09 67.4 55 60.0
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.4e-09 65.5 73 50.7
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 7.8e-07 58.5 111 46.8
Aa31LG10G9070 Aethionema arabicum HOM05D007115 ORTHO05D008923 2.3e-06 57.0 103 46.6


User provided reference genes

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