Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.4e-223 779.2 391 100.0
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 6.1e-166 587.8 408 75.2
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 3.5e-161 572.0 419 71.4
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.0e-160 570.5 391 76.0
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 5.6e-159 564.7 418 71.5
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 1.4e-154 550.1 389 74.3
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.4e-154 550.1 389 74.3
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.6e-153 546.6 402 72.9
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 6.6e-152 541.2 410 72.7
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 1.8e-149 533.1 402 72.1
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.3e-144 516.9 433 63.3
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.8e-133 479.9 422 61.8
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 9.6e-103 377.9 431 47.3
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.6e-102 377.1 373 53.1
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.6e-102 377.1 424 48.1
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 3.7e-102 375.9 422 48.3
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 6.3e-102 375.2 420 47.9
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 2.6e-100 369.8 425 48.0
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 6.5e-99 365.2 428 48.6
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.1e-98 364.4 422 50.0
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 9.3e-98 361.3 419 49.2
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 2.7e-97 359.8 448 46.7
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 6.1e-97 358.6 426 49.8
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 1.0e-96 357.8 429 47.8
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 3.9e-96 355.9 439 45.6
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 4.3e-95 352.4 420 48.3
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 2.2e-94 350.1 396 49.5
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 3.7e-94 349.4 448 44.4
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 3.7e-94 349.4 426 45.5
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.8e-93 347.1 430 46.7
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 2.0e-92 343.6 383 50.1
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.0e-91 341.3 424 47.6
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.7e-91 340.5 382 50.5
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 3.8e-91 339.3 423 46.1
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 6.5e-91 338.6 407 48.9
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 8.5e-91 338.2 425 44.0
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.1e-90 337.8 354 50.6
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.2e-90 335.9 423 47.0
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 7.2e-90 335.1 383 50.1
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 1.2e-89 334.3 422 46.0
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.6e-89 334.0 425 46.8
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.6e-89 334.0 415 47.2
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 7.9e-89 331.6 409 47.2
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.9e-89 331.6 419 46.3
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.4e-88 330.9 426 44.8
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.8e-88 330.5 416 46.2
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.8e-88 330.5 416 46.2
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 8.8e-88 328.2 405 45.7
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 2.0e-87 327.0 419 45.8
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 3.3e-87 326.2 457 41.6
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.3e-86 324.3 417 45.6
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 8.2e-86 321.6 428 43.0
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.4e-85 320.9 419 43.4
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 6.9e-85 318.5 421 45.1
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 5.9e-84 315.5 429 43.8
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 5.9e-84 315.5 403 43.2
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.2e-83 313.5 428 43.7
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 5.5e-82 308.9 466 41.4
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 7.2e-82 308.5 442 43.7
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 2.7e-81 306.6 424 43.9
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.4e-80 304.3 428 43.9
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 1.8e-80 303.9 412 42.5
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 3.0e-80 303.1 412 44.7
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 8.8e-80 301.6 380 46.3
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.5e-79 300.8 410 43.4
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 2.6e-79 300.1 411 44.5
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 4.4e-79 299.3 430 41.2
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.1e-77 294.7 412 43.7
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 3.1e-77 293.1 412 43.7
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 4.1e-77 292.7 423 41.1
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 7.0e-77 292.0 433 43.2
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 5.0e-75 285.8 407 41.8
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 6.5e-75 285.4 431 42.0
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.5e-74 284.3 412 42.5
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.2e-74 283.1 376 44.7
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 8.8e-72 275.0 154 83.1
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.5e-71 274.2 406 42.6
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 3.3e-71 273.1 384 42.2
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 3.3e-71 273.1 446 39.2
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.7e-70 270.8 402 43.0
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 3.5e-68 263.1 375 40.3
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 7.7e-68 261.9 403 40.7
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 8.8e-64 248.4 233 61.4
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 2.6e-63 246.9 206 66.0
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 4.8e-62 242.7 272 47.1
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 3.1e-61 240.0 522 32.2
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.2e-59 233.8 426 38.5
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.5e-58 230.3 209 53.6
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 5.5e-58 229.2 341 45.2
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 2.7e-57 226.9 418 36.8
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 8.0e-57 225.3 204 52.9
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 1.4e-56 224.6 206 53.9
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 4.0e-56 223.0 217 51.6
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 5.7e-55 219.2 317 43.2
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.3e-51 208.0 449 32.1
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 8.6e-51 205.3 398 33.9
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 3.0e-48 196.8 172 53.5
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.5e-47 194.5 172 52.9
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 2.6e-47 193.7 312 42.9
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.7e-46 191.0 315 41.9
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 4.3e-42 176.4 166 52.4
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 1.2e-39 168.3 376 32.7
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.2e-37 160.2 206 40.8
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.2e-37 160.2 206 40.8
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.1e-37 159.8 148 58.1
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 4.1e-37 159.8 205 41.0
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 5.4e-37 159.5 478 28.9
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 9.2e-37 158.7 148 58.1
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.2e-36 158.3 118 61.0
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 1.2e-36 158.3 128 54.7
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 3.0e-35 153.7 185 50.3
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 6.6e-35 152.5 265 37.7
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 1.5e-34 151.4 158 57.0
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 3.4e-31 140.2 140 54.3
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 2.2e-30 137.5 149 53.7
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 3.2e-29 133.7 143 51.0
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 6.0e-28 129.4 133 53.4
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 1.7e-27 127.9 113 47.8
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.1e-26 125.2 284 37.3
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.5e-26 124.8 184 43.5
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 5.6e-26 122.9 261 36.8
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.7e-25 119.8 160 38.8
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.4e-21 108.2 158 45.6
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.4e-21 108.2 134 44.0
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 5.1e-19 99.8 127 34.6
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.5e-18 98.2 126 43.7
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 2.5e-18 97.4 109 50.5
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 3.6e-17 93.6 125 44.8
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 3.1e-16 90.5 82 52.4
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.1e-13 82.0 195 32.3
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.0e-11 75.5 148 40.5
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 4.8e-09 66.6 130 36.9
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.2e-07 62.0 49 59.2
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 2.9e-06 57.4 70 38.6


User provided reference genes

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