Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 2.4e-189 665.2 313 100.0
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 3.3e-178 628.2 312 93.6
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 7.3e-178 627.1 310 93.5
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 4.7e-177 624.4 310 93.2
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 1.1e-176 623.2 312 92.9
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.4e-176 622.9 312 92.9
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 9.6e-170 600.1 312 89.1
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 8.1e-169 597.0 312 89.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 2.0e-167 592.4 312 87.5
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 5.8e-167 590.9 312 87.5
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.3e-166 589.7 312 86.5
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 5.8e-159 564.3 312 85.3
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 7.6e-159 563.9 312 83.0
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 9.9e-159 563.5 312 82.7
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.8e-145 518.1 305 75.1
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.5e-143 513.1 303 73.6
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.7e-142 509.6 303 72.9
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 5.5e-141 504.6 306 74.2
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 5.5e-141 504.6 308 70.8
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 9.3e-141 503.8 315 71.7
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 3.5e-140 501.9 303 71.9
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 4.6e-140 501.5 303 71.3
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 7.9e-140 500.7 303 72.6
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.0e-139 500.4 307 73.9
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.3e-139 500.0 309 71.2
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 1.8e-139 499.6 303 72.3
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.3e-139 499.2 316 70.9
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 3.9e-139 498.4 305 71.5
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.9e-139 498.4 305 71.5
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 5.1e-139 498.0 309 70.6
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.7e-139 497.7 305 71.1
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.7e-139 497.3 305 73.4
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.1e-138 496.9 307 69.1
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.1e-138 496.9 305 71.5
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.9e-138 496.1 303 71.9
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.9e-138 496.1 303 71.3
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 1.9e-138 496.1 316 69.9
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 2.5e-138 495.7 308 71.4
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.3e-138 495.4 303 71.9
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 5.7e-138 494.6 315 70.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 9.7e-138 493.8 315 70.8
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.3e-137 493.4 303 71.6
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.3e-137 493.4 303 71.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.6e-137 493.0 303 70.0
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.2e-137 492.7 310 70.6
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 3.7e-137 491.9 301 69.8
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 3.7e-137 491.9 302 71.2
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.7e-137 491.9 308 71.4
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 4.8e-137 491.5 307 71.3
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 4.8e-137 491.5 302 71.9
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 6.3e-137 491.1 301 71.4
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 8.2e-137 490.7 303 71.6
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 8.2e-137 490.7 303 71.3
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 8.2e-137 490.7 309 68.0
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.1e-136 490.3 315 70.2
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.4e-136 490.0 303 70.0
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.8e-136 489.6 303 71.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.4e-136 489.2 306 70.3
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 2.4e-136 489.2 303 71.3
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 3.1e-136 488.8 315 69.2
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 4.1e-136 488.4 316 68.0
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 9.0e-136 487.3 309 68.9
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.2e-135 486.9 303 71.0
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.2e-135 486.9 317 68.8
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 2.0e-135 486.1 303 70.3
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 2.0e-135 486.1 310 70.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.0e-135 486.1 309 70.2
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 2.6e-135 485.7 303 69.6
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.6e-135 485.7 303 71.0
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.4e-135 485.3 308 70.1
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 4.5e-135 485.0 307 69.4
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 4.5e-135 485.0 307 71.0
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 4.5e-135 485.0 309 68.6
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 5.9e-135 484.6 303 69.3
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 5.9e-135 484.6 303 70.6
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 5.9e-135 484.6 306 68.3
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 7.6e-135 484.2 303 70.6
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 7.6e-135 484.2 303 69.0
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 1.0e-134 483.8 309 69.3
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 1.0e-134 483.8 309 68.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.0e-134 483.8 309 70.6
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.3e-134 483.4 297 73.7
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.3e-134 483.4 317 68.5
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.7e-134 483.0 302 69.9
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.7e-134 483.0 308 69.8
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.9e-134 482.3 303 69.0
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 5.0e-134 481.5 303 70.3
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.1e-133 480.3 309 67.3
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 1.1e-133 480.3 308 69.5
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.4e-133 479.9 306 69.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 2.5e-133 479.2 307 70.0
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 2.5e-133 479.2 309 68.9
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.2e-133 478.8 309 67.3
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.2e-133 478.8 308 69.8
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 4.2e-133 478.4 301 69.4
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.5e-133 478.0 304 69.4
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 5.5e-133 478.0 303 69.3
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 9.4e-133 477.2 306 69.0
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 9.4e-133 477.2 309 68.3
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.2e-132 476.9 303 68.6
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.6e-132 476.5 305 67.9
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 2.1e-132 476.1 309 68.0
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.6e-132 474.9 309 66.3
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 1.4e-131 473.4 307 69.1
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 8.8e-131 470.7 309 65.4
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 2.5e-130 469.2 309 65.7
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 5.7e-130 468.0 303 68.3
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.2e-129 466.1 303 66.7
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 3.7e-129 465.3 306 67.6
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 4.8e-129 464.9 306 67.3
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-128 462.2 306 68.6
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.0e-126 457.2 303 66.7
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.0e-126 457.2 303 66.7
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.7e-126 456.4 309 65.4
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.7e-126 456.4 305 67.5
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 2.5e-125 452.6 305 63.0
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 5.5e-125 451.4 302 66.2
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 3.9e-123 445.3 306 65.7
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 5.1e-123 444.9 269 70.6
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.5e-122 443.4 304 65.1
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.0e-122 443.0 289 68.5
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.3e-122 442.2 314 62.1
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.2e-121 439.5 292 66.1
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.2e-121 439.5 309 62.5
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.8e-121 438.3 274 70.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.4e-120 436.8 303 64.7
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 3.8e-118 428.7 308 62.7
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 3.2e-117 425.6 283 66.8
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 9.4e-117 424.1 307 59.6
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.2e-111 407.1 311 57.6
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 4.2e-109 398.7 302 59.6
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.6e-108 395.6 307 62.5
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.6e-108 395.6 307 62.5
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.5e-106 390.2 285 61.8
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.2e-105 386.3 308 57.1
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 2.4e-104 382.9 304 54.9
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 3.2e-101 372.5 302 55.6
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 2.2e-97 359.8 310 53.5
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 4.1e-96 355.5 222 68.5
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 8.6e-94 347.8 213 70.4
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.6e-92 343.6 303 55.4
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 1.4e-91 340.5 304 52.6
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 8.3e-81 304.7 267 54.3
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 4.4e-74 282.3 172 72.7
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-64 250.4 299 44.1
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.3e-61 239.2 251 50.6
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.1e-51 206.5 128 71.9
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 4.2e-48 196.1 309 36.6
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.9e-43 178.7 105 74.3
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 6.9e-43 178.7 323 32.5
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.9e-41 173.3 122 59.0
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 2.4e-35 153.7 341 30.2
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 2.2e-33 147.1 235 37.0
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 6.0e-31 139.0 99 60.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.2e-12 77.4 46 73.9
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 9.1e-11 72.0 74 50.0


User provided reference genes

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