Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g20590 Schrenkiella parvula HOM05D007612 ORTHO05D009468 3.3e-101 372.1 246 100.0
Thhalv10027572m.g Eutrema salsugineum HOM05D007612 ORTHO05D009468 8.8e-70 267.7 211 81.5
Carub.0007s1876 Capsella rubella HOM05D007612 ORTHO05D009468 4.9e-68 261.9 216 79.6
CARHR229440 Cardamine hirsuta HOM05D007612 ORTHO05D009468 4.5e-66 255.4 213 88.3
AL7G31050 Arabidopsis lyrata HOM05D007612 ORTHO05D009468 6.8e-62 241.5 211 78.7
C01p16860 Brassica napus HOM05D007612 ORTHO05D009468 1.7e-60 236.9 209 86.6
BolC1t01627H Brassica oleracea HOM05D007612 ORTHO05D009468 1.7e-60 236.9 209 86.6
A01p13840 Brassica napus HOM05D007612 ORTHO05D009468 7.0e-59 231.5 209 84.7
BraA01t01329Z Brassica rapa HOM05D007612 ORTHO05D009468 9.2e-59 231.1 209 84.7
AT4G22550 Arabidopsis thaliana HOM05D007612 ORTHO05D009468 1.6e-58 230.3 212 63.7
THA.LOC104813682 Tarenaya hassleriana HOM05D007612 ORTHO05D009468 1.3e-52 210.7 213 68.1
Aa31LG9G10150 Aethionema arabicum HOM05D007612 ORTHO05D009468 3.7e-52 209.1 208 73.1
BcaC09g51124 Brassica carinata HOM05D007612 ORTHO05D009468 8.6e-49 198.0 210 78.6
Cpa.g.sc29.136 Carica papaya HOM05D007612 ORTHO05D009468 8.9e-30 134.8 140 53.6
Potri.003G111700 Populus trichocarpa HOM05D007612 ORTHO05D009468 4.9e-28 129.0 139 52.5
Manes.01G077500 Manihot esculenta HOM05D007612 ORTHO05D009468 2.4e-27 126.7 146 51.4
Prupe.5G073800 Prunus persica HOM05D007612 ORTHO05D009468 9.3e-27 124.8 131 52.7
Atru.chr9.1343 Acer truncatum HOM05D007612 ORTHO05D009468 1.6e-26 124.0 126 54.8
CANSAT21G0050 Cannabis sativa HOM05D007612 ORTHO05D009468 1.6e-26 124.0 200 36.5
MD04G1086000 Malus domestica HOM05D007612 ORTHO05D009468 3.5e-26 122.9 131 54.2
Cfa012762 Carpinus fangiana HOM05D007612 ORTHO05D009468 4.6e-26 122.5 127 54.3
QL12p013034 Quercus lobata HOM05D007612 ORTHO05D009468 5.1e-25 119.0 126 52.4
arahy.Tifrunner.gnm1.ann1.IY6VWR Arachis hypogaea HOM05D007612 ORTHO05D009468 6.6e-25 118.6 136 49.3
arahy.Tifrunner.gnm1.ann1.5P7LY9 Arachis hypogaea HOM05D007612 ORTHO05D009468 8.7e-25 118.2 136 49.3
C03p84250 Brassica napus HOM05D007612 ORTHO05D009468 8.7e-25 118.2 110 65.5
Ciclev10022424m.g Citrus clementina HOM05D007612 ORTHO05D009468 1.5e-24 117.5 206 38.3
CiPaw.12G107900 Carya illinoinensis HOM05D007612 ORTHO05D009468 1.9e-24 117.1 128 49.2
FvH4_5g00170 Fragaria vesca HOM05D007612 ORTHO05D009468 1.3e-23 114.4 131 48.9
PGR031G3722 Punica granatum HOM05D007612 ORTHO05D009468 2.1e-23 113.6 125 49.6
Duzib205G1442 Durio zibethinus HOM05D007612 ORTHO05D009468 2.8e-23 113.2 126 50.0
RcHm_v2.0_Chr7g0202701 Rosa chinensis HOM05D007612 ORTHO05D009468 4.8e-23 112.5 132 48.5
FAN18G2878 Fragaria x ananassa HOM05D007612 ORTHO05D009468 8.1e-23 111.7 127 50.4
Sc01g0009390 Simmondsia chinensis HOM05D007612 ORTHO05D009468 8.1e-23 111.7 132 43.2
MD06G1062400 Malus domestica HOM05D007612 ORTHO05D009468 1.1e-22 111.3 130 49.2
TWI81G0615 Tripterygium wilfordii HOM05D007612 ORTHO05D009468 1.4e-22 110.9 123 48.8
FAN08G1107 Fragaria x ananassa HOM05D007612 ORTHO05D009468 6.9e-22 108.6 126 49.2
Psat4g070880 Pisum sativum HOM05D007612 ORTHO05D009468 6.9e-22 108.6 133 49.6
SHI20264 Sapria himalayana HOM05D007612 ORTHO05D009468 7.6e-21 105.1 131 46.6
Thecc.03G255500 Theobroma cacao HOM05D007612 ORTHO05D009468 9.9e-21 104.8 195 34.9
Medtr4g101420 Medicago truncatula HOM05D007612 ORTHO05D009468 1.3e-20 104.4 133 45.9
TAR375G1005 Trochodendron aralioides HOM05D007612 ORTHO05D009468 1.3e-20 104.4 131 43.5
FAN13G1385 Fragaria x ananassa HOM05D007612 ORTHO05D009468 4.9e-20 102.4 120 50.8
Phvul.003G218300 Phaseolus vulgaris HOM05D007612 ORTHO05D009468 4.9e-20 102.4 129 45.0
Hma1.2p1_0753F.1_g212875 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 8.4e-20 101.7 130 43.8
Oeu026497.1 Olea europaea HOM05D007612 ORTHO05D009468 1.1e-19 101.3 130 40.0
Glyma.17G139100 Glycine max HOM05D007612 ORTHO05D009468 1.4e-19 100.9 131 44.3
Hma1.2p1_0753F.1_g212900 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 1.4e-19 100.9 130 43.1
Lj4g0014551 Lotus japonicus HOM05D007612 ORTHO05D009468 1.4e-19 100.9 135 45.2
Glyma.05G056700 Glycine max HOM05D007612 ORTHO05D009468 1.9e-19 100.5 129 43.4
Lj2C213T3 Lonicera japonica HOM05D007612 ORTHO05D009468 2.4e-19 100.1 140 43.6
Os02g0661800 Oryza sativa ssp. japonica HOM05D007612 ORTHO05D009468 3.2e-19 99.8 126 46.8
Zm00001eb186700 Zea mays HOM05D007612 ORTHO05D009468 7.1e-19 98.6 125 46.4
Sabra03G0077400 Salix brachista HOM05D007612 ORTHO05D009468 1.6e-18 97.4 116 47.4
BolC3t20707H Brassica oleracea HOM05D007612 ORTHO05D009468 2.1e-18 97.1 96 62.5
Ah.02g116870 Amaranthus hybridus HOM05D007612 ORTHO05D009468 2.7e-18 96.7 120 45.0
SalBow1G3910 Salvia bowleyana HOM05D007612 ORTHO05D009468 6.0e-18 95.5 132 40.2
Cc08_g12820 Coffea canephora HOM05D007612 ORTHO05D009468 1.3e-17 94.4 135 39.3
Lsat_1_v5_gn_6_2640 Lactuca sativa HOM05D007612 ORTHO05D009468 1.8e-17 94.0 146 41.8
SEGI_06780 Sequoiadendron giganteum HOM05D007612 ORTHO05D009468 1.8e-17 94.0 129 43.4
ATR0763G178 Amborella trichopoda HOM05D007612 ORTHO05D009468 3.0e-17 93.2 141 42.6
AUR62007488 Chenopodium quinoa HOM05D007612 ORTHO05D009468 3.0e-17 93.2 109 44.0
DCAR_004931 Daucus carota HOM05D007612 ORTHO05D009468 3.9e-17 92.8 133 41.4
DCAR_028126 Daucus carota HOM05D007612 ORTHO05D009468 3.9e-17 92.8 133 41.4
Lalb_Chr05g0225591 Lupinus albus HOM05D007612 ORTHO05D009468 3.9e-17 92.8 137 40.1
MSTRG.1941 Avicennia marina HOM05D007612 ORTHO05D009468 5.1e-17 92.4 134 38.1
HanXRQChr02g0049471 Helianthus annuus HOM05D007612 ORTHO05D009468 5.1e-17 92.4 138 42.8
CDE12G0540 Ceratophyllum demersum HOM05D001278 ORTHO05D009468 6.7e-17 92.0 126 41.3
Rhsim03G0239900 Rhododendron simsii HOM05D007612 ORTHO05D009468 6.7e-17 92.0 150 39.3
Mapoly0056s0139 Marchantia polymorpha HOM05D007612 ORTHO05D009468 8.7e-17 91.7 149 39.6
SEGI_35634 Sequoiadendron giganteum HOM05D007612 ORTHO05D009468 8.7e-17 91.7 129 40.3
unitig_26.g9270 Utricularia gibba HOM05D007612 ORTHO05D009468 1.1e-16 91.3 134 39.6
COL.COLO4_03562 Corchorus olitorius HOM05D007612 ORTHO05D009468 1.5e-16 90.9 104 48.1
Migut.E01671 Erythranthe guttata HOM05D007612 ORTHO05D009468 1.9e-16 90.5 134 38.1
Migut.E00853 Erythranthe guttata HOM05D007612 ORTHO05D009468 4.3e-16 89.4 134 37.3
CAN.G1217.8 Capsicum annuum HOM05D007612 ORTHO05D009468 1.4e-14 84.3 123 38.2
Hma1.2p1_0753F.1_g212890 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 3.1e-14 83.2 108 41.7
Nitab4.5_0000312g0380 Nicotiana tabacum HOM05D007612 ORTHO05D009468 5.3e-14 82.4 145 37.9
TPR.G37688 Trifolium pratense HOM05D007612 ORTHO05D009468 5.3e-14 82.4 126 42.1
SMO200G0174 Selaginella moellendorffii HOM05D007612 ORTHO05D009468 1.5e-13 80.9 126 42.9
Sopen08g027460 Solanum pennellii HOM05D007612 ORTHO05D009468 3.4e-13 79.7 123 39.8
Solyc08g078990.3 Solanum lycopersicum HOM05D007612 ORTHO05D009468 7.6e-13 78.6 135 38.5
Pp3c11_1660 Physcomitrium patens HOM05D007612 ORTHO05D009468 8.4e-12 75.1 140 37.9
CBR_g29550 Chara braunii HOM05D007612 ORTHO05D009468 1.9e-11 73.9 135 40.7
SMO181G0010 Selaginella moellendorffii HOM05D007612 ORTHO05D009468 2.4e-11 73.6 124 39.5
PRCOL_00000794 Prasinoderma coloniale HOM05D007612 ORTHO05D009468 3.2e-11 73.2 118 39.0
Gohir.A12G219300 Gossypium hirsutum HOM05D007612 ORTHO05D009468 4.2e-11 72.8 206 29.6
Nitab4.5_0010169g0020 Nicotiana tabacum HOM05D007612 ORTHO05D009468 4.2e-11 72.8 110 40.9
Pp3c22_3050 Physcomitrium patens HOM05D007612 ORTHO05D009468 4.6e-10 69.3 157 35.7
Pp3c2_32240 Physcomitrium patens HOM05D007612 ORTHO05D009468 5.1e-09 65.9 134 35.1
EL10Ac5g13022 Beta vulgaris HOM05D007612 ORTHO05D009468 9.6e-08 61.6 87 39.1
Dinv21611 Davidia involucrata HOM05D007612 ORTHO05D009468 1.3e-07 61.2 75 44.0


User provided reference genes

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