Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.5e-136 488.8 247 100.0
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 3.0e-134 481.9 247 98.4
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 3.9e-134 481.5 247 98.0
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 6.7e-134 480.7 247 98.4
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 6.7e-134 480.7 247 98.4
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 8.7e-134 480.3 247 98.4
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 3.3e-133 478.4 247 98.0
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 9.6e-133 476.9 247 97.6
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 9.6e-133 476.9 247 97.6
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 2.1e-132 475.7 247 97.2
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 2.1e-132 475.7 247 97.2
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 2.8e-132 475.3 247 97.2
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 3.1e-131 471.9 247 96.8
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 6.9e-131 470.7 248 96.4
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 1.2e-130 469.9 248 96.8
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 7.6e-130 467.2 247 95.1
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.2e-129 465.7 247 94.7
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 2.5e-128 462.2 247 93.9
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.7e-127 458.8 247 93.1
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 1.0e-126 456.8 247 93.1
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 1.0e-126 456.8 247 93.1
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 1.0e-126 456.8 247 93.1
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 1.0e-126 456.8 247 93.1
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.0e-126 456.8 247 93.5
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 3.9e-126 454.9 247 92.7
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 3.9e-126 454.9 247 92.7
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 5.1e-126 454.5 247 92.7
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 1.9e-125 452.6 247 92.3
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 4.8e-124 448.0 247 90.7
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 1.1e-123 446.8 247 90.3
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 89.9
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 1.8e-123 446.0 245 90.6
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 89.5
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 5.3e-123 444.5 247 90.7
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 5.3e-123 444.5 247 89.9
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 6.9e-123 444.1 246 89.8
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 88.7
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 90.3
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 88.7
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.1
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.1
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 89.1
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 89.1
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 88.7
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 5.9e-122 441.0 247 88.7
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 5.9e-122 441.0 247 88.7
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 1.3e-121 439.9 247 89.1
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 87.8
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 2.2e-121 439.1 247 89.1
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 2.2e-121 439.1 247 88.3
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.2e-121 439.1 245 89.4
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 2.9e-121 438.7 247 88.3
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 2.9e-121 438.7 247 89.5
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.8e-121 438.3 252 88.1
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.8e-121 438.3 247 88.7
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 3.8e-121 438.3 247 88.3
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 89.1
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 89.1
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 5.0e-121 438.0 247 88.3
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 89.1
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 6.5e-121 437.6 244 88.9
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 6.5e-121 437.6 246 87.8
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 8.5e-121 437.2 247 87.9
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 1.1e-120 436.8 247 87.0
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 88.7
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 88.3
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 87.9
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 88.3
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 88.3
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 89.1
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 87.9
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 2.5e-120 435.6 247 87.4
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 3.2e-120 435.3 247 88.3
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 3.2e-120 435.3 247 87.9
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.3
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.3
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 5.5e-120 434.5 247 87.9
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 7.2e-120 434.1 247 87.9
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 7.2e-120 434.1 247 87.4
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 9.4e-120 433.7 247 87.4
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 9.4e-120 433.7 247 87.9
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 9.4e-120 433.7 247 88.3
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 9.4e-120 433.7 247 88.3
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.2e-119 433.3 246 86.6
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 1.2e-119 433.3 247 87.4
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 1.2e-119 433.3 247 87.0
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 1.2e-119 433.3 247 86.6
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 1.6e-119 433.0 247 86.6
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 1.6e-119 433.0 246 87.4
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 1.6e-119 433.0 247 86.6
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 2.1e-119 432.6 247 86.6
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 2.7e-119 432.2 246 87.4
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.6e-119 431.8 245 88.6
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 4.6e-119 431.4 243 86.8
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 4.6e-119 431.4 247 87.4
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 248 87.5
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 6.1e-119 431.0 243 86.8
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 7.9e-119 430.6 243 86.8
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.0e-118 430.3 245 86.9
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.0e-118 430.3 245 86.5
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.4e-118 429.9 247 87.4
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 1.8e-118 429.5 247 85.8
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 2.3e-118 429.1 248 87.1
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 2.3e-118 429.1 248 87.1
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 3.0e-118 428.7 248 86.7
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 3.0e-118 428.7 248 88.3
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 3.9e-118 428.3 248 86.7
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 3.9e-118 428.3 248 86.7
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 5.1e-118 427.9 248 87.1
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 6.7e-118 427.6 243 86.0
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 6.7e-118 427.6 244 86.5
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 2.5e-117 425.6 245 86.1
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.3e-117 425.2 248 85.1
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 4.3e-117 424.9 248 85.9
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 1.3e-116 423.3 269 81.4
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 1.8e-115 419.5 246 86.2
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 5.3e-115 417.9 246 85.8
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 6.9e-115 417.5 248 85.9
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.2e-114 416.8 248 83.9
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 2.0e-114 416.0 248 84.7
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 3.4e-114 415.2 234 89.3
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 5.9e-114 414.5 260 81.2
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 1.0e-113 413.7 286 76.2
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 1.6e-111 406.4 247 83.4
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.6e-111 405.2 290 72.8
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 1.1e-109 400.2 250 80.4
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 7.4e-109 397.5 334 65.6
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 4.8e-108 394.8 252 78.2
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 1.4e-107 393.3 250 78.4
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 4.1e-107 391.7 380 58.4
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 5.3e-107 391.3 248 78.2
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 3.8e-105 385.2 251 76.9
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 6.5e-105 384.4 252 75.4
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 1.1e-104 383.6 251 75.7
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 4.4e-101 371.7 266 73.3
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 7.4e-101 370.9 213 86.9
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.3e-100 370.2 223 83.4
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 6.3e-100 367.9 211 84.8
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 6.3e-100 367.9 211 84.8
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 5.0e-97 358.2 359 57.1
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 1.3e-89 333.6 245 70.2
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 5.5e-88 328.2 247 71.3
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 9.4e-88 327.4 198 86.9
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 7.0e-83 311.2 245 68.6
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 5.0e-81 305.1 179 86.6
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.0e-78 297.4 172 88.4
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 5.2e-78 295.0 172 87.8
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 4.4e-77 292.0 168 85.7
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.8e-75 286.6 165 86.1
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 2.9e-68 262.7 280 53.2
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 1.2e-61 240.7 241 49.4
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 5.6e-56 221.9 138 80.4
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 3.3e-48 196.1 232 44.0
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 2.1e-47 193.4 247 44.1
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.7e-47 192.2 247 51.0
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 2.4e-43 179.9 102 85.3
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 4.2e-43 179.1 208 54.3
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.3e-39 167.5 97 85.6
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.1e-32 144.4 165 52.1
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 5.6e-32 142.1 82 90.2
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 9.6e-32 141.4 87 82.8
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 2.4e-30 136.7 141 54.6
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 1.2e-29 134.4 83 81.9
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 3.4e-29 132.9 212 46.2
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 5.8e-29 132.1 82 80.5
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 2.7e-26 123.2 232 37.1
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 7.1e-19 98.6 99 48.5
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.9e-17 92.8 57 84.2
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 9.6e-16 88.2 51 80.4
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 8.2e-15 85.1 51 84.3
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 3.1e-14 83.2 74 64.9
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 4.1e-14 82.8 79 59.5
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 5.3e-14 82.4 52 86.5
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 2.6e-13 80.1 47 74.5
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.5e-11 73.6 112 48.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.6e-10 70.9 90 52.2
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 3.0e-09 66.6 36 86.1
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 3.0e-09 66.6 36 86.1
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 5.1e-09 65.9 45 77.8
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 8.7e-09 65.1 36 83.3
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.3e-07 61.2 98 46.9
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 2.8e-07 60.1 90 48.9


User provided reference genes

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