Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g20370 Schrenkiella parvula HOM05D001567 ORTHO05D001409 3.7e-103 378.3 197 100.0
Thhalv10026221m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 4.3e-59 231.9 163 81.0
A03p53380 Brassica napus HOM05D001567 ORTHO05D001409 2.2e-55 219.5 153 79.1
BcaNung03750 Brassica carinata HOM05D001567 ORTHO05D001409 4.9e-55 218.4 157 80.3
CARHR229140 Cardamine hirsuta HOM05D001567 ORTHO05D001409 8.4e-55 217.6 164 79.3
AT4G22250 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 2.4e-54 216.1 161 79.5
AL7G31380 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 5.4e-54 214.9 161 79.5
BraA03t14405Z Brassica rapa HOM05D001567 ORTHO05D001409 7.9e-53 211.1 153 77.8
BolC1t01600H Brassica oleracea HOM05D001567 ORTHO05D001409 3.0e-52 209.1 160 77.5
BraA01t01305Z Brassica rapa HOM05D001567 ORTHO05D001409 2.5e-51 206.1 161 77.0
C07p51690 Brassica napus HOM05D001567 ORTHO05D001409 4.3e-51 205.3 157 75.2
Carub.0007s1907 Capsella rubella HOM05D001567 ORTHO05D001409 2.8e-50 202.6 157 76.4
BcaNung00803 Brassica carinata HOM05D001567 ORTHO05D001409 1.1e-49 200.7 157 74.5
BolC7t45660H Brassica oleracea HOM05D002913 ORTHO05D001409 3.1e-49 199.1 157 73.9
BcaC09g51147 Brassica carinata HOM05D001567 ORTHO05D001409 2.0e-48 196.4 156 76.3
BcaNung01702 Brassica carinata HOM05D001567 ORTHO05D001409 6.5e-47 191.4 153 75.2
A01p13630 Brassica napus HOM05D005176 ORTHO05D006482 5.5e-38 161.8 132 75.0
Aa31LG6G4360 Aethionema arabicum HOM05D001567 ORTHO05D001409 3.3e-35 152.5 157 60.5
C01p16510 Brassica napus HOM05D005176 ORTHO05D006482 1.6e-34 150.2 127 74.0
Thhalv10029329m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 1.4e-33 147.1 161 60.2
AL6G47750 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 1.7e-31 140.2 163 58.3
AT4G03965 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 1.9e-30 136.7 164 54.9
CARHR253430 Cardamine hirsuta HOM05D001567 ORTHO05D001409 5.5e-30 135.2 156 58.3
Sp6g04740 Schrenkiella parvula HOM05D001567 ORTHO05D001409 1.2e-29 134.0 159 58.5
THA.LOC104813470 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 4.6e-29 132.1 164 58.5
BcaB01g02609 Brassica carinata HOM05D001567 ORTHO05D001409 1.0e-28 131.0 152 57.9
Carub.0006s3204 Capsella rubella HOM05D001567 ORTHO05D001409 6.7e-28 128.3 158 55.7
C03p36140 Brassica napus HOM05D001567 ORTHO05D001409 1.7e-26 123.6 153 57.5
BolC3t15924H Brassica oleracea HOM05D001567 ORTHO05D001409 1.8e-25 120.2 153 56.9
A03p29870 Brassica napus HOM05D001567 ORTHO05D001409 9.1e-25 117.9 153 56.2
BraA03t12177Z Brassica rapa HOM05D001567 ORTHO05D001409 9.1e-25 117.9 153 56.2
BcaC01g04571 Brassica carinata HOM05D001567 ORTHO05D001409 5.9e-24 115.2 153 55.6
Aa31LG9G9940 Aethionema arabicum HOM05D001567 ORTHO05D001409 1.4e-20 104.0 144 53.5
Lalb_Chr15g0087831 Lupinus albus HOM05D001567 ORTHO05D001409 3.5e-16 89.4 137 45.3
Glyma.15G112600 Glycine max HOM05D001567 ORTHO05D001409 2.9e-15 86.3 139 42.4
Ca_21058_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 8.5e-15 84.7 134 48.5
Glyma.07G264100 Glycine max HOM05D001567 ORTHO05D001409 1.5e-14 84.0 161 41.6
Glyma.09G008200 Glycine max HOM05D001567 ORTHO05D001409 7.2e-14 81.6 124 46.0
Cpa.g.c45104 Carica papaya HOM05D001567 ORTHO05D001409 9.4e-14 81.3 182 39.0
Lj6g0015850 Lotus japonicus HOM05D001567 ORTHO05D001409 2.1e-13 80.1 122 47.5
Lalb_Chr18g0056821 Lupinus albus HOM05D001567 ORTHO05D001409 1.0e-12 77.8 152 42.8
Thecc.06G229600 Theobroma cacao HOM05D001567 ORTHO05D001409 3.9e-12 75.9 134 41.0
VMungo0540G0409 Vigna mungo HOM05D001567 ORTHO05D001409 3.9e-12 75.9 120 45.8
Medtr2g025080 Medicago truncatula HOM05D001567 ORTHO05D001409 5.2e-12 75.5 144 42.4
Phvul.003G082200 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 6.7e-12 75.1 142 45.1
COL.COLO4_31845 Corchorus olitorius HOM05D001567 ORTHO05D001409 1.1e-11 74.3 163 36.8
Haze_06885 Corylus avellana HOM05D001567 ORTHO05D001409 1.5e-11 73.9 166 36.7
Oeu007157.1 Olea europaea HOM05D001567 ORTHO05D001409 1.5e-11 73.9 158 36.1
Ca_00700_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 2.6e-11 73.2 142 43.0
Psat1g177600 Pisum sativum HOM05D001567 ORTHO05D001409 2.6e-11 73.2 126 44.4
Sabra04G0001700 Salix brachista HOM05D001567 ORTHO05D001409 2.6e-11 73.2 157 38.2
Glyma.17G009900 Glycine max HOM05D001567 ORTHO05D001409 3.3e-11 72.8 141 43.3
Phvul.006G145000 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 4.4e-11 72.4 117 41.9
Cfa000139 Carpinus fangiana HOM05D001567 ORTHO05D001409 9.7e-11 71.2 166 36.1
CiPaw.10G075300 Carya illinoinensis HOM05D001567 ORTHO05D001409 9.7e-11 71.2 152 38.2
VMungo1215G2300 Vigna mungo HOM05D001567 ORTHO05D001409 1.7e-10 70.5 142 43.0
Actinidia02333 Actinidia chinensis HOM05D001567 ORTHO05D001409 2.2e-10 70.1 148 35.8
DCAR_002207 Daucus carota HOM05D001567 ORTHO05D001409 2.8e-10 69.7 149 36.2
FAN25G3753 Fragaria x ananassa HOM05D001567 ORTHO05D001409 4.8e-10 68.9 164 35.4
Hma1.2p1_0298F.1_g117420 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 6.3e-10 68.6 214 33.2
Lj4g0027518 Lotus japonicus HOM05D001567 ORTHO05D001409 6.3e-10 68.6 151 39.1
Ah.09g234460 Amaranthus hybridus HOM05D001567 ORTHO05D001409 1.1e-09 67.8 146 38.4
Sed0020262 Sechium edule HOM05D001567 ORTHO05D001409 1.4e-09 67.4 131 40.5
FAN21G3527 Fragaria x ananassa HOM05D001567 ORTHO05D001409 1.8e-09 67.0 162 35.8
arahy.Tifrunner.gnm1.ann1.KST8W5 Arachis hypogaea HOM05D001567 ORTHO05D001409 4.1e-09 65.9 161 36.6
FvH4_3g01290 Fragaria vesca HOM05D001567 ORTHO05D001409 4.1e-09 65.9 160 34.4
arahy.Tifrunner.gnm1.ann1.IL02F1 Arachis hypogaea HOM05D001567 ORTHO05D001409 9.1e-09 64.7 158 37.3
QL05p070193 Quercus lobata HOM05D001567 ORTHO05D001409 1.2e-08 64.3 172 36.6
EL10Ac8g20137 Beta vulgaris HOM05D001567 ORTHO05D001409 1.6e-08 63.9 157 35.0
Ciclev10017636m.g Citrus clementina HOM05D001567 ORTHO05D001409 1.6e-08 63.9 163 38.0
QL03p008070 Quercus lobata HOM05D001567 ORTHO05D001409 1.6e-08 63.9 170 36.5
MBI19_g03674_MAGBIO Magnolia biondii HOM05D001567 ORTHO05D001409 2.0e-08 63.5 137 34.3
Gohir.A05G174000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 2.6e-08 63.2 116 39.7
Gorai.009G182400 Gossypium raimondii HOM05D001567 ORTHO05D001409 2.6e-08 63.2 116 39.7
MSTRG.7186 Avicennia marina HOM05D001567 ORTHO05D001409 3.5e-08 62.8 132 37.9
RcHm_v2.0_Chr5g0001841 Rosa chinensis HOM05D001567 ORTHO05D001409 3.5e-08 62.8 128 35.9
MD05G1353900 Malus domestica HOM05D001567 ORTHO05D001409 4.5e-08 62.4 183 35.5
Gohir.D05G177000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 7.7e-08 61.6 116 39.7
Migut.M01364 Erythranthe guttata HOM05D001567 ORTHO05D001409 1.0e-07 61.2 158 36.1
CSS0012763 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 1.3e-07 60.8 161 34.2
Dinv20114 Davidia involucrata HOM05D001567 ORTHO05D001409 1.7e-07 60.5 176 33.5
Oeu051873.1 Olea europaea HOM05D000787 ORTHO05D001409 2.2e-07 60.1 105 41.0
Haze_12764 Corylus avellana HOM05D001567 ORTHO05D001409 2.9e-07 59.7 108 38.9
ClCG01G021600 Citrullus lanatus HOM05D001567 ORTHO05D001409 3.8e-07 59.3 157 35.0
Peaxi162Scf01096g00011 Petunia axillaris HOM05D001567 ORTHO05D001409 3.8e-07 59.3 179 34.6
CsaV3_6G048640 Cucumis sativus L. HOM05D001567 ORTHO05D001409 6.5e-07 58.5 139 37.4
AUR62012764 Chenopodium quinoa HOM05D001567 ORTHO05D001409 8.5e-07 58.2 230 30.9
MD10G1328000 Malus domestica HOM05D001567 ORTHO05D001409 1.1e-06 57.8 127 36.2
Potri.004G003101 Populus trichocarpa HOM05D001567 ORTHO05D001409 1.1e-06 57.8 159 34.6
Solyc03g031830.1 Solanum lycopersicum HOM05D001567 ORTHO05D001409 1.1e-06 57.8 98 42.9
TAR020G0004 Trochodendron aralioides HOM05D001567 ORTHO05D001409 1.1e-06 57.8 139 33.8
MELO3C007424.2 Cucumis melo HOM05D001567 ORTHO05D001409 1.5e-06 57.4 139 35.3
Nitab4.5_0002613g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 1.5e-06 57.4 153 32.7
Nitab4.5_0011973g0020 Nicotiana tabacum HOM05D001567 ORTHO05D001409 1.5e-06 57.4 109 38.5
Duzib235G0464 Durio zibethinus HOM05D001567 ORTHO05D001409 1.9e-06 57.0 141 34.0
Psat4g005200 Pisum sativum HOM05D001567 ORTHO05D001409 1.9e-06 57.0 126 38.9
Sopen03g005690 Solanum pennellii HOM05D001567 ORTHO05D001409 1.9e-06 57.0 98 42.9
THA.LOC104809475 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 3.2e-06 56.2 148 36.5
CANSAT56G0685 Cannabis sativa HOM05D001567 ORTHO05D001409 4.2e-06 55.8 187 33.2
CANSAT56G1550 Cannabis sativa HOM05D001567 ORTHO05D001409 4.2e-06 55.8 187 33.2
CAN.G404.5 Capsicum annuum HOM05D000114 ORTHO05D005904 4.2e-06 55.8 89 43.8
Gorai.010G184800 Gossypium raimondii HOM05D001567 ORTHO05D001409 4.2e-06 55.8 117 37.6
PGSC0003DMG400024061 Solanum tuberosum HOM05D001567 ORTHO05D001409 4.2e-06 55.8 170 32.4
vmacro03659 Vaccinium macrocarpon HOM05D001567 ORTHO05D001409 4.2e-06 55.8 141 34.8
Nitab4.5_0009515g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 5.5e-06 55.5 155 35.5
CDE04G1021 Ceratophyllum demersum HOM05D002234 ORTHO05D002254 7.2e-06 55.1 101 35.6
Eucgr.E03980 Eucalyptus grandis HOM05D001567 ORTHO05D001409 7.2e-06 55.1 148 37.2
SGA_v2.0_scaffold7G03788 Striga asiatica HOM05D001567 ORTHO05D001409 7.2e-06 55.1 140 37.9
TAR629G0424 Trochodendron aralioides HOM05D001567 ORTHO05D001409 7.2e-06 55.1 145 36.6
Manes.17G022526 Manihot esculenta HOM05D001567 ORTHO05D001409 9.4e-06 54.7 153 34.6
Nitab4.5_0004821g0030 Nicotiana tabacum HOM05D001567 ORTHO05D001409 9.4e-06 54.7 137 35.0


User provided reference genes

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