Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g20070 Schrenkiella parvula HOM05D009543 ORTHO05D004666 1.7e-58 229.2 118 100.0
BraA01t01269Z Brassica rapa HOM05D009543 ORTHO05D004666 7.0e-49 197.2 118 83.1
BcaC09g51183 Brassica carinata HOM05D009543 ORTHO05D004666 3.5e-48 194.9 118 82.2
C01p15970 Brassica napus HOM05D009543 ORTHO05D004666 3.5e-48 194.9 118 82.2
BolC1t01557H Brassica oleracea HOM05D009543 ORTHO05D004666 3.5e-48 194.9 118 82.2
BcaNung02262 Brassica carinata HOM05D009543 ORTHO05D004666 4.6e-48 194.5 118 82.2
Thhalv10026583m.g Eutrema salsugineum HOM05D009543 ORTHO05D004666 6.4e-42 174.1 119 77.3
Carub.0007s1945 Capsella rubella HOM05D009543 ORTHO05D004666 8.3e-42 173.7 120 75.8
AT4G21902 Arabidopsis thaliana HOM05D009543 ORTHO05D004666 7.8e-40 167.2 118 72.9
CARHR228690 Cardamine hirsuta HOM05D009543 ORTHO05D004666 3.3e-38 161.8 118 70.3
AL7G31950 Arabidopsis lyrata HOM05D009543 ORTHO05D004666 3.9e-23 111.7 79 73.4
AT4G04745 Arabidopsis thaliana HOM05D009543 ORTHO05D004666 3.3e-22 108.6 119 55.5
AL6G48230 Arabidopsis lyrata HOM05D009543 ORTHO05D004666 4.3e-22 108.2 119 55.5
CARHR252810 Cardamine hirsuta HOM05D009543 ORTHO05D004666 2.8e-21 105.5 112 55.4
Sp6g04195 Schrenkiella parvula HOM05D009543 ORTHO05D004666 4.8e-21 104.8 115 55.7
Thhalv10029169m.g Eutrema salsugineum HOM05D009543 ORTHO05D004666 1.4e-20 103.2 113 53.1
C03p36430 Brassica napus HOM05D009543 ORTHO05D004666 4.5e-19 98.2 115 50.4
BolC3t15955H Brassica oleracea HOM05D009543 ORTHO05D004666 4.5e-19 98.2 115 50.4
BcaB01g02575 Brassica carinata HOM05D009543 ORTHO05D004666 5.8e-19 97.8 114 51.8
A03p30180 Brassica napus HOM05D009543 ORTHO05D004666 7.6e-19 97.4 115 49.6
BraA03t12202Z Brassica rapa HOM05D009543 ORTHO05D004666 7.6e-19 97.4 115 49.6
A09p26130 Brassica napus HOM05D009543 ORTHO05D004666 5.4e-17 91.3 117 49.6
BraA09t38180Z Brassica rapa HOM05D009543 ORTHO05D004666 5.4e-17 91.3 117 49.6
BcaB01g01831 Brassica carinata HOM05D009543 ORTHO05D004666 2.7e-16 89.0 118 46.6
Carub.0006s3264 Capsella rubella HOM05D009543 ORTHO05D004666 2.7e-16 89.0 124 48.4
BcaC04g21321 Brassica carinata HOM05D009543 ORTHO05D004666 3.0e-15 85.5 118 44.1
C09p33170 Brassica napus HOM05D009543 ORTHO05D004666 3.0e-15 85.5 118 44.1
BolC9t56151H Brassica oleracea HOM05D009543 ORTHO05D004666 3.0e-15 85.5 118 44.1
THA.LOC104806304 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 1.3e-13 80.1 123 46.3
Aa31LG6G3890 Aethionema arabicum HOM05D005226 ORTHO05D004666 7.1e-09 64.3 93 46.2
BcaB01g01833 Brassica carinata HOM05D009543 ORTHO05D004666 7.1e-09 64.3 119 40.3
Nn5g29365 Nelumbo nucifera HOM05D005226 ORTHO05D004666 7.1e-09 64.3 118 36.4
Thhalv10009573m.g Eutrema salsugineum HOM05D005226 ORTHO05D004666 2.1e-08 62.8 119 37.0
Glyma.13G205400 Glycine max HOM05D005226 ORTHO05D004666 2.7e-08 62.4 118 35.6
Glyma.15G107000 Glycine max HOM05D005226 ORTHO05D004666 2.7e-08 62.4 118 35.6
BcaNung04807 Brassica carinata HOM05D005226 ORTHO05D004666 3.5e-08 62.0 119 35.3
BolC5t29718H Brassica oleracea HOM05D005226 ORTHO05D004666 7.9e-08 60.8 119 35.3
Carub.0001s1129 Capsella rubella HOM05D005226 ORTHO05D004666 7.9e-08 60.8 122 35.2
Gohir.D05G172800 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.8e-07 59.7 80 43.8
AT1G11655 Arabidopsis thaliana HOM05D005226 ORTHO05D004666 2.3e-07 59.3 119 35.3
arahy.Tifrunner.gnm1.ann1.0GES1T Arachis hypogaea HOM05D005226 ORTHO05D004666 2.3e-07 59.3 102 39.2
A06p08210 Brassica napus HOM05D005226 ORTHO05D004666 3.0e-07 58.9 119 34.5
BraA06t24021Z Brassica rapa HOM05D005226 ORTHO05D004666 3.0e-07 58.9 119 34.5
A09p64400 Brassica napus HOM05D005226 ORTHO05D004666 3.9e-07 58.5 121 32.2
BraA09t41784Z Brassica rapa HOM05D005226 ORTHO05D004666 3.9e-07 58.5 121 32.2
Thecc.06G087600 Theobroma cacao HOM05D005226 ORTHO05D004666 3.9e-07 58.5 120 37.5
C08p48100 Brassica napus HOM05D005226 ORTHO05D004666 5.1e-07 58.2 121 32.2
CARHR011960 Cardamine hirsuta HOM05D005226 ORTHO05D004666 5.1e-07 58.2 121 34.7
COL.COLO4_31758 Corchorus olitorius HOM05D005226 ORTHO05D004666 5.1e-07 58.2 87 41.4
THA.LOC104818840 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 5.1e-07 58.2 122 33.6
CANSAT56G2875 Cannabis sativa HOM05D005226 ORTHO05D004666 1.1e-06 57.0 116 37.9
Gohir.A05G169600 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.1e-06 57.0 80 42.5
Gorai.009G178000 Gossypium raimondii HOM05D005226 ORTHO05D004666 1.1e-06 57.0 80 42.5
BcaB08g37410 Brassica carinata HOM05D005226 ORTHO05D004666 1.5e-06 56.6 121 32.2
C05p09770 Brassica napus HOM05D005226 ORTHO05D004666 1.5e-06 56.6 119 33.6
Prupe.4G022200 Prunus persica HOM05D005226 ORTHO05D004666 1.5e-06 56.6 78 41.0
TAR624G0719 Trochodendron aralioides HOM05D005226 ORTHO05D004666 1.9e-06 56.2 119 36.1
Lj6g0027274 Lotus japonicus HOM05D005226 ORTHO05D004666 2.5e-06 55.8 118 34.7
VMungo0540G0286 Vigna mungo HOM05D005226 ORTHO05D004666 2.5e-06 55.8 118 33.9
AL1G22790 Arabidopsis lyrata HOM05D005226 ORTHO05D004666 3.3e-06 55.5 119 33.6
BcaC05g25032 Brassica carinata HOM05D005226 ORTHO05D004666 3.3e-06 55.5 119 33.6
C08p14770 Brassica napus HOM05D005226 ORTHO05D004666 3.3e-06 55.5 120 30.8
Atru.chr10.2207 Acer truncatum HOM05D005226 ORTHO05D004666 4.3e-06 55.1 116 35.3
Duzib160G0401 Durio zibethinus HOM05D005226 ORTHO05D004666 4.3e-06 55.1 80 42.5
Potri.004G016800 Populus trichocarpa HOM05D005226 ORTHO05D004666 4.3e-06 55.1 109 33.0
BcaC07g38677 Brassica carinata HOM05D005226 ORTHO05D004666 5.6e-06 54.7 119 30.3
BolC8t49112H Brassica oleracea HOM05D005226 ORTHO05D004666 5.6e-06 54.7 119 30.3
ClCG01G022050 Citrullus lanatus HOM05D005226 ORTHO05D004666 5.6e-06 54.7 77 44.2
Ciclev10017536m.g Citrus clementina HOM05D005226 ORTHO05D004666 5.6e-06 54.7 118 34.7
Medtr2g022960 Medicago truncatula HOM05D005226 ORTHO05D004666 5.6e-06 54.7 78 43.6
PGR004G1778 Punica granatum HOM05D005226 ORTHO05D004666 5.6e-06 54.7 108 38.9
BcaC07g41768 Brassica carinata HOM05D005226 ORTHO05D004666 7.4e-06 54.3 101 34.7
Duzib235G0113 Durio zibethinus HOM05D005226 ORTHO05D004666 7.4e-06 54.3 80 40.0
Gohir.A10G013400 Gossypium hirsutum HOM05D005226 ORTHO05D004666 7.4e-06 54.3 82 40.2
arahy.Tifrunner.gnm1.ann1.1P1WAU Arachis hypogaea HOM05D005226 ORTHO05D004666 9.6e-06 53.9 96 38.5
Nitab4.5_0006137g0040 Nicotiana tabacum HOM05D005226 ORTHO05D004666 9.6e-06 53.9 103 34.0


User provided reference genes

Program Settings