Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 2.7e-127 458.8 250 100.0
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 5.5e-67 258.5 253 70.8
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 3.1e-62 242.7 254 62.6
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 7.1e-59 231.5 243 61.3
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 6.0e-58 228.4 258 58.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.8e-57 226.9 248 61.3
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.0e-57 226.1 248 61.7
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.5e-56 223.8 250 58.0
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.5e-56 223.8 249 61.8
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 9.6e-56 221.1 244 61.5
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.8e-54 216.9 238 60.9
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 5.3e-54 215.3 250 58.4
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 6.5e-44 181.8 235 50.2
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.2e-35 152.5 249 47.8
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.2e-34 151.0 249 47.8
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.7e-34 149.8 243 46.5
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.3e-28 131.0 249 40.6
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.7e-28 130.6 268 38.4
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.0e-25 121.3 257 38.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.8e-25 120.6 255 38.8
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.8e-25 120.6 244 41.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.3e-25 120.2 269 37.2
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.3e-25 120.2 239 43.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.3e-25 120.2 263 40.3
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 5.2e-25 119.0 267 38.2
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 6.7e-25 118.6 243 38.7
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 8.8e-25 118.2 276 37.7
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.2e-24 117.9 255 37.6
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 5.7e-24 115.5 262 37.8
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 7.5e-24 115.2 276 41.3
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 7.5e-24 115.2 244 41.0
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 9.7e-24 114.8 251 41.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.7e-23 114.0 268 37.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.2e-23 113.6 287 35.2
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.8e-23 113.2 255 34.9
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 3.7e-23 112.8 270 38.1
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.4e-22 110.9 255 39.2
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.4e-22 110.9 262 42.0
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.4e-22 110.9 253 37.5
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 2.4e-22 110.2 263 36.9
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 3.1e-22 109.8 252 36.5
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 7.0e-22 108.6 255 38.8
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 9.1e-22 108.2 278 36.3
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 9.1e-22 108.2 259 36.3
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.6e-21 107.5 276 37.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.6e-21 107.5 253 36.4
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.6e-21 107.5 274 36.1
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.6e-21 107.5 254 37.4
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.7e-21 106.7 274 37.2
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.5e-21 106.3 238 43.3
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 4.5e-21 105.9 262 35.1
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.3e-20 104.4 244 35.7
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 2.2e-20 103.6 247 38.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.2e-20 103.6 261 35.6
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.9e-20 103.2 249 36.9
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 8.5e-20 101.7 276 38.0
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.5e-20 101.7 276 38.0
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.1e-19 101.3 255 36.1
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.1e-19 101.3 255 38.4
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.5e-19 100.9 260 41.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.5e-19 100.9 246 38.2
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.9e-19 100.5 274 37.6
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 4.2e-19 99.4 227 41.4
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.2e-18 97.8 170 44.7
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.6e-18 97.4 248 37.5
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.7e-18 96.7 251 35.1
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.7e-18 96.7 245 36.3
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.7e-18 96.7 277 37.5
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.7e-18 95.9 206 38.3
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.7e-18 95.9 268 33.6
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 8.0e-18 95.1 161 43.5
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.4e-17 94.4 270 32.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.8e-17 94.0 345 28.7
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.8e-17 94.0 270 34.8
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.3e-17 93.6 252 36.5
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 5.2e-17 92.4 253 38.7
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 8.8e-17 91.7 283 33.9
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.5e-16 90.9 305 33.4
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.5e-16 90.9 285 35.1
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.5e-16 90.9 249 34.1
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.6e-16 90.1 270 34.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 4.4e-16 89.4 275 36.0
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 9.8e-16 88.2 275 33.5
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.3e-15 87.8 276 33.0
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 2.2e-15 87.0 240 34.2
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.8e-15 86.7 283 32.2
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 3.7e-15 86.3 246 35.4
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 4.8e-15 85.9 238 34.5
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.3e-15 85.1 250 36.0
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 8.3e-15 85.1 250 36.0
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.3e-15 85.1 270 32.2
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.4e-14 84.3 237 32.9
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-14 84.3 247 34.0
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.4e-14 83.6 239 34.7
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 3.1e-14 83.2 259 35.9
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.0e-14 82.0 249 34.1
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.0e-13 80.5 172 37.8
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 7.7e-13 78.6 156 39.1
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.0e-12 78.2 222 35.1
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.3e-12 77.8 173 37.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.3e-12 77.0 148 37.2
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 2.9e-12 76.6 136 42.6
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.1e-11 74.7 292 30.5
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.9e-11 73.9 137 40.1
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 8.0e-10 68.6 213 33.3
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.4e-09 67.8 189 31.7
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.3e-09 67.0 270 31.1
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 5.2e-09 65.9 224 32.1
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 5.2e-09 65.9 252 30.6
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 6.8e-09 65.5 206 36.4
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 3.4e-08 63.2 136 34.6
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 5.7e-08 62.4 200 32.0
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.4e-06 57.8 140 33.6
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 5.4e-06 55.8 161 34.8


User provided reference genes

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