Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.8e-81 305.8 152 100.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.9e-73 277.3 152 90.8
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 4.5e-72 274.6 152 88.8
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-69 266.5 153 88.9
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.2e-69 266.5 153 88.9
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 4.6e-69 264.6 153 88.2
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 2.3e-68 262.3 156 84.6
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 2.3e-68 262.3 156 84.6
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.1e-67 260.0 153 86.9
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.9e-67 259.2 154 85.7
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.3e-67 258.5 154 86.4
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 2.8e-66 255.4 153 85.6
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 3.7e-66 255.0 154 85.1
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 5.3e-65 251.1 155 84.5
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.9e-62 242.7 156 82.7
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 2.5e-62 242.3 152 82.2
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 8.7e-60 233.8 155 79.4
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 2.2e-47 192.6 109 90.8
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 8.5e-47 190.7 152 67.1
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.1e-41 173.7 152 61.8
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 5.9e-40 167.9 128 68.8
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.2e-39 166.0 136 60.3
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 5.0e-39 164.9 103 73.8
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 5.0e-39 164.9 136 61.8
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.1e-38 163.7 103 73.8
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.9e-38 162.9 136 61.8
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 1.9e-38 162.9 109 70.6
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 3.2e-38 162.2 110 73.6
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 5.5e-38 161.4 134 63.4
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 5.5e-38 161.4 103 72.8
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 9.4e-38 160.6 106 73.6
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.2e-37 160.2 103 80.6
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.2e-37 160.2 103 73.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 4.7e-37 158.3 110 72.7
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.0e-36 157.1 110 71.8
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.8e-36 156.4 131 61.8
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.8e-36 156.4 132 62.1
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.8e-36 156.4 150 56.0
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 2.3e-36 156.0 101 74.3
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 3.0e-36 155.6 116 68.1
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 6.7e-36 154.5 93 76.3
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 8.8e-36 154.1 143 58.0
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.2e-35 153.7 117 69.2
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.5e-35 153.3 152 55.3
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 1.5e-35 153.3 93 76.3
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.0e-35 152.9 146 53.4
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 2.0e-35 152.9 129 61.2
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 2.6e-35 152.5 118 64.4
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 2.6e-35 152.5 94 78.7
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.3e-35 152.1 110 69.1
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 4.4e-35 151.8 131 59.5
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 4.4e-35 151.8 96 78.1
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 4.4e-35 151.8 101 72.3
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 5.7e-35 151.4 93 78.5
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 5.7e-35 151.4 88 80.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 7.5e-35 151.0 129 62.0
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 9.7e-35 150.6 99 81.8
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 9.7e-35 150.6 147 53.1
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.3e-34 150.2 86 82.6
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.3e-34 150.2 86 81.4
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.7e-34 149.8 129 62.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.2e-34 149.4 105 72.4
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.2e-34 149.4 107 72.0
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 2.2e-34 149.4 144 58.3
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.2e-34 149.4 144 56.2
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 2.8e-34 149.1 148 54.1
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 2.8e-34 149.1 93 75.3
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.7e-34 148.7 122 60.7
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 6.3e-34 147.9 103 71.8
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 6.3e-34 147.9 107 70.1
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.4e-33 146.7 94 72.3
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.4e-33 146.7 94 72.3
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 2.4e-33 146.0 81 82.7
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 3.1e-33 145.6 132 60.6
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 3.1e-33 145.6 96 69.8
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 4.1e-33 145.2 96 69.8
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 4.1e-33 145.2 141 56.7
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 5.3e-33 144.8 94 72.3
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 5.3e-33 144.8 114 62.3
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 7.0e-33 144.4 92 73.9
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.7e-32 142.5 94 69.1
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 3.5e-32 142.1 107 68.2
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.5e-32 142.1 92 72.8
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 5.9e-32 141.4 100 72.0
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.3e-31 140.2 83 80.7
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.7e-31 139.8 110 67.3
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.7e-31 139.8 148 51.4
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.7e-31 139.8 106 66.0
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 2.2e-31 139.4 88 72.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.2e-31 139.4 82 79.3
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 5.0e-31 138.3 94 67.0
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.6e-29 132.1 103 67.0
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 6.8e-28 127.9 71 80.3
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 6.3e-26 121.3 103 62.1
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.1e-25 120.6 80 70.0
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 5.4e-25 118.2 102 57.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 7.0e-25 117.9 68 76.5
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.7e-24 115.9 150 48.0
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 6.5e-23 111.3 75 72.0
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.6e-21 106.7 76 65.8
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.6e-21 105.5 90 62.2
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 4.7e-21 105.1 79 64.6
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 3.0e-20 102.4 122 50.8
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.2e-18 96.3 56 82.1
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.1e-14 84.0 74 64.9
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 3.3e-14 82.4 68 63.2


User provided reference genes

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