Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g19100 Schrenkiella parvula HOM05D012071 ORTHO05D013970 8.3e-29 130.2 93 100.0
C01p14990 Brassica napus HOM05D012071 ORTHO05D013970 9.5e-25 116.7 93 71.0
BcaNung04703 Brassica carinata HOM05D012071 ORTHO05D013970 4.0e-23 111.3 97 85.6
BcaC09g51267 Brassica carinata HOM05D012071 ORTHO05D013970 6.8e-23 110.5 97 88.7
Carub.0007s2040 Capsella rubella HOM05D012071 ORTHO05D013970 1.6e-19 99.4 100 82.0
Thhalv10026664m.g Eutrema salsugineum HOM05D012071 ORTHO05D013970 4.6e-19 97.8 96 84.4
A03p52620 Brassica napus HOM05D012071 ORTHO05D013970 2.3e-18 95.5 83 91.6
BraA03t14336Z Brassica rapa HOM05D012071 ORTHO05D013970 3.0e-18 95.1 83 94.0
A01p12410 Brassica napus HOM05D000777 ORTHO05D000595 6.6e-18 94.0 47 97.9
BraA01t01187Z Brassica rapa HOM05D000777 ORTHO05D000595 6.6e-18 94.0 47 97.9
AL7G33090 Arabidopsis lyrata HOM05D012071 ORTHO05D013970 2.5e-17 92.0 95 74.7
C07p51060 Brassica napus HOM05D012071 ORTHO05D013970 3.3e-17 91.7 83 89.2
BolC1t01447H Brassica oleracea HOM05D000777 ORTHO05D000595 3.3e-17 91.7 46 97.8
BolC7t45606H Brassica oleracea HOM05D012071 ORTHO05D013970 2.1e-16 89.0 83 86.7
CARHR227630 Cardamine hirsuta HOM05D012071 ORTHO05D013970 2.1e-16 89.0 47 93.6
AT4G21060 Arabidopsis thaliana HOM05D000777 ORTHO05D000595 1.1e-15 86.7 47 93.6
Aa31LG6G3080 Aethionema arabicum HOM05D012071 ORTHO05D013970 2.4e-12 75.5 43 93.0
A08p15420 Brassica napus HOM05D012071 ORTHO05D013970 2.4e-12 75.5 44 86.4
BcaB03g11702 Brassica carinata HOM05D012071 ORTHO05D013970 3.6e-08 61.6 46 71.7
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.8e-07 59.3 101 46.5
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 1.8e-07 59.3 100 48.0
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 2.4e-07 58.9 97 45.4
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 4.0e-07 58.2 97 43.3
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 4.0e-07 58.2 95 44.2
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 6.9e-07 57.4 39 79.5
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 6.9e-07 57.4 101 45.5
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 6.9e-07 57.4 39 79.5
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 6.9e-07 57.4 101 45.5
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-06 56.2 101 43.6
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-06 56.2 95 42.1
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 1.5e-06 56.2 90 41.1
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 2.0e-06 55.8 95 42.1
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 2.0e-06 55.8 39 76.9
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 2.0e-06 55.8 98 46.9
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 2.6e-06 55.5 39 74.4
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 2.6e-06 55.5 93 57.0
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.6e-06 55.5 90 44.4
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.4e-06 55.1 95 46.3
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 4.4e-06 54.7 39 76.9
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 4.4e-06 54.7 39 76.9
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 4.4e-06 54.7 39 76.9
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 5.8e-06 54.3 39 74.4
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 5.8e-06 54.3 90 45.6
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.8e-06 54.3 39 76.9
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 7.6e-06 53.9 93 38.7
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 9.9e-06 53.5 93 41.9
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 9.9e-06 53.5 39 76.9
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 9.9e-06 53.5 97 55.7
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 9.9e-06 53.5 90 44.4


User provided reference genes

Program Settings