Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 1.8e-142 509.2 247 100.0
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 9.0e-131 470.3 247 91.1
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 6.5e-121 437.6 247 86.6
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 2.1e-119 432.6 247 87.0
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 7.4e-117 424.1 248 83.5
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.3e-116 423.3 249 85.1
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.7e-116 422.9 248 83.9
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 1.0e-113 413.7 251 84.1
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.4e-110 403.3 251 79.7
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 3.9e-110 401.7 252 79.0
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 1.5e-104 383.3 212 87.3
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 6.7e-102 374.4 252 75.0
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.5e-88 330.1 193 84.5
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 8.8e-86 320.9 260 61.5
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 8.3e-84 314.3 258 63.6
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.8e-83 313.2 256 61.3
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 4.1e-83 312.0 255 61.6
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 5.4e-83 311.6 258 59.7
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 7.0e-83 311.2 260 59.6
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.2e-82 310.5 259 61.8
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 1.2e-82 310.5 255 61.6
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 4.5e-82 308.5 255 62.0
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 4.5e-82 308.5 258 61.6
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 7.7e-82 307.8 256 60.5
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 6.6e-81 304.7 258 60.5
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 1.1e-80 303.9 261 60.2
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.9e-80 303.1 255 60.0
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 2.1e-79 299.7 260 60.4
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 4.7e-79 298.5 256 61.7
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 8.0e-79 297.7 246 61.0
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 1.0e-78 297.4 262 58.4
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 1.8e-78 296.6 255 60.8
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 2.3e-78 296.2 256 61.3
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 2.3e-78 296.2 249 61.4
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 3.0e-78 295.8 246 60.6
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 5.2e-78 295.0 257 59.1
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 1.5e-77 293.5 265 58.5
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 2.6e-77 292.7 261 60.2
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 2.6e-77 292.7 245 60.8
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 2.6e-77 292.7 261 58.6
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 3.4e-77 292.4 261 59.4
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 4.4e-77 292.0 264 59.1
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 4.4e-77 292.0 266 58.6
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 5.7e-77 291.6 246 60.2
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 5.7e-77 291.6 260 58.8
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 7.5e-77 291.2 262 59.2
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 1.3e-76 290.4 262 57.6
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.7e-76 290.0 262 57.3
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.7e-76 288.9 255 58.8
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 3.7e-76 288.9 246 60.2
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 1.8e-75 286.6 263 57.8
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 3.2e-75 285.8 208 68.3
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 3.2e-75 285.8 267 56.2
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 4.1e-75 285.4 262 58.0
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 9.2e-75 284.3 256 57.8
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 9.2e-75 284.3 263 57.8
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 5.9e-74 281.6 275 54.9
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 1.7e-73 280.0 256 55.1
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 2.9e-73 279.3 256 55.1
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 3.9e-73 278.9 261 57.5
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 8.6e-73 277.7 252 56.3
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 2.5e-72 276.2 221 65.6
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 3.3e-72 275.8 272 52.9
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 3.3e-72 275.8 251 56.6
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 2.1e-71 273.1 257 57.6
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 6.1e-71 271.6 256 55.5
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 8.0e-71 271.2 227 61.2
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 1.8e-70 270.0 202 67.8
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.5e-69 266.9 292 51.4
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 1.9e-67 260.0 260 55.8
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.9e-67 260.0 269 50.6
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 9.2e-67 257.7 246 54.5
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 1.7e-65 253.4 246 54.5
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 2.3e-65 253.1 184 66.8
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 1.9e-64 250.0 175 67.4
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 3.3e-64 249.2 257 51.8
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 5.6e-64 248.4 256 51.2
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 7.3e-64 248.1 227 57.3
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 1.6e-63 246.9 272 50.7
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 1.1e-62 244.2 185 67.0
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 1.4e-62 243.8 255 50.6
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 8.9e-62 241.1 279 49.1
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 9.8e-61 237.7 264 48.5
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 3.7e-60 235.7 207 58.0
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 8.3e-60 234.6 249 51.4
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 4.6e-58 228.8 252 50.4
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 4.4e-53 212.2 195 60.5
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.7e-52 209.1 130 73.1
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.4e-51 206.5 201 57.2
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 7.1e-51 204.9 276 44.9
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 4.6e-50 202.2 197 54.3
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 3.3e-48 196.1 192 56.8
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 8.9e-46 188.0 251 45.8
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 2.6e-45 186.4 253 44.7
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.4e-45 186.0 190 54.2
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 1.7e-44 183.7 180 55.6
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.5e-40 169.9 162 56.8
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 4.3e-40 169.1 318 38.1
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 3.4e-37 159.5 135 60.7
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 2.7e-34 149.8 252 38.9
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 1.3e-33 147.5 153 52.3
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 8.7e-33 144.8 131 58.0
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 7.3e-32 141.7 156 53.2
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.6e-31 139.4 164 50.0
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 2.6e-29 133.3 253 36.4
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 4.5e-29 132.5 157 47.1
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 9.9e-29 131.3 165 46.1
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 6.4e-28 128.6 105 53.3
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 1.4e-19 100.9 172 34.9
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 1.6e-18 97.4 192 37.5
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.0e-17 94.7 64 67.2
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 5.1e-17 92.4 196 32.1
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 9.6e-16 88.2 65 64.6
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 1.8e-14 84.0 175 33.1
BcaB04g18148 Brassica carinata HOM05D007105 ORTHO05D009304 9.7e-08 61.6 237 24.1
BcaC07g37753 Brassica carinata HOM05D007105 ORTHO05D009304 1.4e-06 57.8 243 24.7
BolC8t48138H Brassica oleracea HOM05D007105 ORTHO05D009304 1.4e-06 57.8 243 24.7
Sp1g27320 Schrenkiella parvula HOM05D007105 ORTHO05D009304 3.1e-06 56.6 236 23.7


User provided reference genes

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