Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.0e-210 735.7 421 100.0
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 9.2e-192 673.7 429 79.3
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.3e-190 669.8 429 78.8
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 6.4e-185 651.0 429 80.9
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.4e-184 649.0 429 80.4
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 3.3e-181 638.6 428 79.2
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.9e-176 622.9 432 77.3
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 1.9e-176 622.9 427 83.8
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 3.6e-172 608.6 438 75.8
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 1.1e-155 553.9 425 66.4
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 6.9e-155 551.2 401 69.8
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.6e-148 528.9 434 60.6
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.6e-148 528.9 441 60.8
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 8.1e-148 527.7 425 62.1
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.0e-147 525.4 436 61.7
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 4.0e-147 525.4 432 61.6
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 5.3e-147 525.0 444 60.1
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 6.9e-147 524.6 441 60.3
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.2e-146 523.9 441 59.6
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.2e-146 523.9 438 59.6
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.2e-146 523.9 441 60.5
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.0e-146 523.1 429 60.6
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 2.6e-146 522.7 430 60.7
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 5.8e-146 521.5 429 65.0
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 1.3e-145 520.4 436 64.4
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.3e-145 520.4 438 61.0
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.9e-145 519.2 440 59.1
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.8e-145 518.8 436 60.8
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 4.9e-145 518.5 425 60.2
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.1e-144 517.3 433 59.8
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.1e-144 517.3 435 64.8
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.1e-144 517.3 425 60.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.4e-144 516.9 440 59.8
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 3.2e-144 515.8 442 65.6
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 5.4e-144 515.0 445 59.1
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 5.4e-144 515.0 438 62.3
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 9.3e-144 514.2 424 62.3
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.8e-142 510.0 435 63.9
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 1.8e-142 510.0 439 59.5
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 3.9e-142 508.8 454 57.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 8.7e-142 507.7 440 66.4
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.1e-141 507.3 449 59.0
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.9e-141 506.5 449 58.8
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 5.6e-141 505.0 446 63.9
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.3e-140 503.8 451 63.0
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.6e-140 503.4 421 61.5
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 2.8e-140 502.7 441 63.9
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 8.1e-140 501.1 442 66.1
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 8.1e-140 501.1 426 61.3
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 1.1e-139 500.7 434 64.7
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 6.9e-139 498.0 460 58.9
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.5e-138 496.9 447 57.5
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.5e-138 496.9 457 60.0
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 2.0e-138 496.5 421 59.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.4e-138 495.7 441 59.4
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 7.6e-138 494.6 434 61.1
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.9e-138 494.2 430 64.9
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.9e-137 492.7 344 77.9
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.8e-137 492.3 439 59.0
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 4.9e-137 491.9 442 58.6
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 4.9e-137 491.9 421 58.2
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.4e-136 490.3 447 62.6
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.9e-136 490.0 295 78.3
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 7.1e-136 488.0 302 75.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 9.3e-136 487.6 445 58.4
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.3e-136 487.6 299 75.9
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 9.3e-136 487.6 302 76.2
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 9.3e-136 487.6 327 70.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.6e-135 486.9 436 58.9
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.6e-135 486.9 434 59.4
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 3.0e-134 482.6 426 61.5
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 3.9e-134 482.3 443 56.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 2.5e-133 479.6 299 73.2
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 5.6e-133 478.4 426 62.0
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 1.3e-132 477.2 462 59.1
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 2.4e-131 473.0 440 57.7
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 4.5e-130 468.8 430 56.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.9e-129 466.1 304 71.7
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.6e-127 458.8 429 59.9
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 4.6e-127 458.8 299 72.6
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 4.6e-127 458.8 446 54.0
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.6e-127 458.8 423 55.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.8e-126 456.8 447 53.0
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.0e-126 456.1 301 71.4
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.1e-125 454.1 301 71.1
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 5.9e-122 441.8 438 53.7
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.0e-121 441.0 438 53.9
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 5.0e-121 438.7 504 49.4
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 7.9e-119 431.4 266 72.9
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 8.8e-118 427.9 293 67.6
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 5.1e-110 402.1 425 50.4
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 9.7e-109 397.9 299 62.5
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.1e-107 394.4 296 61.8
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.1e-107 394.4 296 61.8
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 5.3e-107 392.1 233 78.5
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.4e-104 384.0 303 61.4
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.2e-103 380.9 291 61.5
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.0e-102 377.9 241 72.6
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.7e-100 370.5 219 78.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 4.8e-100 369.0 266 66.5
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 8.5e-97 358.2 346 56.9
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.7e-95 353.2 303 57.4
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.7e-95 352.4 225 72.0
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.7e-87 325.9 340 50.3
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 4.7e-87 325.9 201 75.6
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 1.4e-83 314.3 343 53.1
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 8.6e-73 278.5 274 48.9
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 7.0e-67 258.8 203 62.1
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 7.0e-67 258.8 203 62.1
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 3.5e-66 256.5 278 43.5
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 3.3e-56 223.4 119 84.0
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 2.3e-54 217.2 167 62.9
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.5e-45 188.0 189 52.4
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 9.3e-35 152.1 255 37.3
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 1.6e-34 151.4 129 55.8
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.2e-29 135.2 110 58.2
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 5.8e-29 132.9 81 72.8
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-28 131.7 70 85.7
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 5.6e-24 116.3 123 45.5
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 2.4e-22 110.9 65 75.4
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 1.3e-20 105.1 77 62.3
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 9.3e-19 99.0 53 81.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.2e-11 73.9 120 30.0
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.6e-10 71.6 39 76.9
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 4.6e-10 70.1 56 55.4
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.4e-06 58.5 57 49.1


User provided reference genes

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