Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 8.7e-170 600.1 285 100.0
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.5e-129 464.2 303 75.9
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.5e-124 448.0 285 73.0
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.8e-122 443.0 285 73.7
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 4.4e-121 438.3 272 76.1
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 1.8e-114 416.4 285 69.8
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.6e-113 412.5 263 73.4
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 9.8e-113 410.6 286 72.0
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 6.3e-112 407.9 285 70.2
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.1e-108 397.1 287 65.5
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 8.0e-99 364.4 300 61.0
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 2.3e-98 362.8 281 63.0
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 9.2e-95 350.9 267 64.0
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 5.1e-85 318.5 281 58.0
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 5.1e-85 318.5 424 44.8
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 2.1e-83 313.2 281 56.6
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 4.0e-82 308.9 284 55.3
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 4.2e-71 272.3 283 49.1
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.8e-67 258.8 283 48.1
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 4.9e-64 248.8 283 47.0
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-62 243.8 279 48.0
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 3.5e-62 242.7 289 45.0
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 6.0e-62 241.9 278 47.5
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 1.3e-61 240.7 285 45.3
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 3.0e-61 239.6 288 46.5
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 9.6e-60 234.6 287 44.9
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.3e-59 234.2 284 45.8
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 3.4e-57 226.1 281 45.2
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.3e-56 224.2 283 44.9
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.7e-56 223.8 276 46.4
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-55 221.1 281 44.8
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 1.1e-55 221.1 281 44.8
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 9.3e-55 218.0 271 45.4
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.3e-53 213.4 289 41.2
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 3.3e-52 209.5 285 45.6
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-51 207.2 272 45.6
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 2.8e-51 206.5 280 45.4
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-51 206.1 283 43.5
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-51 206.1 285 43.2
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-50 203.8 269 43.5
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-50 203.8 269 43.5
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-48 197.6 276 41.7
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 4.9e-48 195.7 297 39.4
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.9e-47 193.7 284 38.7
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.2e-47 193.0 273 40.7
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 9.3e-47 191.4 283 41.0
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 9.3e-47 191.4 272 41.2
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.2e-46 191.0 271 43.2
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.8e-45 187.2 284 39.4
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 3.0e-45 186.4 292 39.4
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 5.1e-45 185.7 287 40.1
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.3e-44 182.6 252 40.9
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 8.2e-43 178.3 267 40.4
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 4.1e-42 176.0 283 37.8
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 6.9e-42 175.3 287 37.6
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 9.0e-42 174.9 285 37.5
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-41 174.1 256 40.2
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.3e-40 171.0 267 40.1
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 8.5e-40 168.3 273 35.2
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 4.2e-39 166.0 270 35.2
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 4.2e-39 166.0 270 35.2
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-38 164.5 270 34.8
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-38 164.1 270 36.7
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.1e-38 163.7 300 36.0
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 2.7e-38 163.3 286 35.7
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 2.7e-38 163.3 286 35.7
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-37 161.4 270 36.7
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 5.1e-37 159.1 263 39.5
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-33 147.5 214 41.1
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-33 147.1 133 52.6
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 1.3e-32 144.4 128 53.1
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.5e-31 140.2 282 34.8
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-30 137.5 275 35.3
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-29 134.4 278 34.5
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-28 131.3 282 31.2
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 2.6e-28 130.2 252 35.7
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-27 127.5 276 32.6
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-27 127.5 289 30.4
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 1.7e-27 127.5 276 32.6
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 4.8e-27 125.9 283 31.4
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 1.1e-26 124.8 279 31.5
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 5.3e-26 122.5 116 49.1
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 2.6e-25 120.2 269 31.2
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 5.9e-25 119.0 280 30.0
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 2.9e-24 116.7 268 29.9
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 5.0e-24 115.9 272 30.9
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 3.2e-23 113.2 278 26.3
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 9.4e-23 111.7 209 34.4
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 1.2e-22 111.3 129 38.8
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 4.7e-22 109.4 279 26.2
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 4.7e-22 109.4 212 34.4
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 6.1e-22 109.0 121 46.3
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 2.3e-21 107.1 256 29.3
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 3.9e-21 106.3 100 56.0
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.3e-20 103.2 251 26.3
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.4e-20 102.8 164 36.0
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 5.7e-20 102.4 253 27.3
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 1.3e-19 101.3 269 27.5
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 1.7e-19 100.9 288 25.3
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 2.2e-19 100.5 226 30.5
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 4.8e-19 99.4 253 27.3
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 6.3e-19 99.0 253 26.5
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 6.3e-19 99.0 253 26.5
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 8.2e-19 98.6 243 27.6
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-18 98.2 226 30.1
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 1.1e-18 98.2 253 26.9
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.4e-18 97.8 284 28.5
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-18 97.8 276 26.1
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 1.8e-18 97.4 288 26.0
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 1.8e-18 97.4 224 27.7
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 1.8e-18 97.4 288 26.0
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 2.4e-18 97.1 285 27.4
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.4e-18 97.1 242 26.9
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 2.4e-18 97.1 89 57.3
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 3.1e-18 96.7 258 26.7
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 3.1e-18 96.7 250 24.4
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 4.1e-18 96.3 224 27.7
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 4.1e-18 96.3 224 29.0
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 5.3e-18 95.9 284 26.8
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 2.0e-17 94.0 225 27.6
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-17 93.6 282 30.1
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-17 93.6 282 30.1
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-17 93.6 282 30.1
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 3.5e-17 93.2 226 28.3
COL.COLO4_37190 Corchorus olitorius HOM05D007337 ORTHO05D010560 5.9e-17 92.4 263 26.6
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 7.7e-17 92.0 227 27.3
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 1.0e-16 91.7 228 28.5
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 1.0e-16 91.7 223 26.9
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 2.9e-16 90.1 262 26.3
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 5.0e-16 89.4 213 27.7
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 5.0e-16 89.4 248 27.0
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 5.0e-16 89.4 213 27.7
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 5.0e-16 89.4 213 27.7
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 6.5e-16 89.0 227 29.5
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 6.5e-16 89.0 93 52.7
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-15 88.2 219 29.7
Nitab4.5_0000312g0140 Nicotiana tabacum HOM05D001099 ORTHO05D010560 7.2e-15 85.5 280 22.9
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.2e-14 84.7 255 25.1
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 1.6e-14 84.3 213 26.3
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 8.0e-14 82.0 116 33.6
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.0e-13 81.6 122 35.2
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 1.0e-13 81.6 222 27.9
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.0e-13 81.6 86 46.5
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-12 77.8 228 27.6
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 2.6e-12 77.0 115 36.5
Actinidia02125 Actinidia chinensis HOM05D001099 ORTHO05D000958 7.5e-12 75.5 101 39.6
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 7.5e-12 75.5 140 30.0
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.7e-11 74.3 267 24.0
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 3.7e-11 73.2 218 24.3
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 8.3e-11 72.0 112 33.0
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-10 70.5 61 55.7
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 4.1e-10 69.7 218 24.8
Peaxi162Scf00002g00191 Petunia axillaris HOM05D001099 ORTHO05D000958 4.1e-10 69.7 221 24.0
QL12p012439 Quercus lobata HOM05D001099 ORTHO05D000958 5.3e-10 69.3 94 36.2
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-09 68.2 112 32.1
PGSC0003DMG400004807 Solanum tuberosum HOM05D001099 ORTHO05D010560 5.9e-09 65.9 108 28.7
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 2.2e-08 63.9 94 35.1
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 3.8e-08 63.2 223 25.1
Nitab4.5_0007598g0030 Nicotiana tabacum HOM05D001099 ORTHO05D000958 3.8e-08 63.2 108 29.6
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 3.8e-08 63.2 96 35.4
AUR62018020 Chenopodium quinoa HOM05D025645 ORTHO05D015279 1.5e-07 61.2 93 40.9
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 1.9e-07 60.8 87 41.4
CAN.G1218.24 Capsicum annuum HOM05D001099 ORTHO05D000958 3.2e-07 60.1 100 30.0
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 5.5e-07 59.3 93 33.3
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 9.4e-07 58.5 118 27.1
Aqoxy5G03898 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 3.6e-06 56.6 107 30.8
C07p47770 Brassica napus HOM05D007337 ORTHO05D004972 3.6e-06 56.6 46 47.8
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 4.7e-06 56.2 140 27.1


User provided reference genes

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