Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 9.5e-93 343.6 184 100.0
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.6e-79 299.7 183 89.6
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.4e-75 286.6 187 82.9
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 2.6e-74 282.3 186 82.3
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 4.1e-72 275.0 178 83.1
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 3.5e-71 271.9 187 82.4
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.7e-70 269.6 185 80.0
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.7e-70 269.6 184 80.4
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.7e-70 269.6 185 80.0
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 5.1e-70 268.1 184 79.9
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.3e-60 236.9 183 74.3
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.2e-49 199.5 184 63.0
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 6.5e-41 171.4 143 71.3
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 7.1e-40 167.9 191 55.0
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.1e-37 160.6 108 74.1
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.1e-37 160.6 108 74.1
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.5e-37 160.2 115 68.7
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 5.7e-37 158.3 108 72.2
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 7.4e-37 157.9 108 70.4
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 9.6e-37 157.5 107 69.2
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 2.1e-36 156.4 107 72.0
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 6.2e-36 154.8 132 58.3
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 8.2e-36 154.5 157 57.3
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.1e-35 154.1 170 54.7
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.1e-35 154.1 108 69.4
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.4e-35 153.7 108 67.6
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.4e-35 153.7 108 71.3
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.4e-35 153.7 113 69.0
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.8e-35 153.3 99 74.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 2.4e-35 152.9 130 60.0
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.4e-35 152.9 108 68.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 4.1e-35 152.1 114 66.7
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 4.1e-35 152.1 125 60.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 5.3e-35 151.8 108 67.6
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 5.3e-35 151.8 123 61.8
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 5.3e-35 151.8 108 66.7
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 6.9e-35 151.4 157 56.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 6.9e-35 151.4 130 59.2
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.2e-34 150.6 121 63.6
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 2.6e-34 149.4 193 49.7
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.6e-34 149.4 158 55.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 2.6e-34 149.4 108 66.7
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 2.6e-34 149.4 130 58.5
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.5e-34 148.7 108 66.7
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.5e-34 148.7 108 66.7
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 4.5e-34 148.7 108 66.7
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 4.5e-34 148.7 108 66.7
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 4.5e-34 148.7 108 66.7
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 4.5e-34 148.7 172 52.9
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 5.8e-34 148.3 116 60.3
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 7.6e-34 147.9 188 51.6
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 7.6e-34 147.9 112 64.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.0e-33 147.5 108 64.8
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.3e-33 147.1 108 64.8
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.7e-33 146.7 107 65.4
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.7e-33 146.7 108 66.7
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 2.2e-33 146.4 108 64.8
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.9e-33 146.0 167 50.3
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.8e-33 145.6 105 67.6
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.8e-33 145.6 191 49.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.0e-33 145.2 147 54.4
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.0e-33 145.2 94 73.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 8.4e-33 144.4 105 64.8
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.1e-32 144.1 108 64.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.1e-32 144.1 108 64.8
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.4e-32 143.7 112 65.2
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.4e-32 143.7 112 64.3
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.9e-32 143.3 105 61.9
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 3.2e-32 142.5 170 50.0
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.2e-32 142.1 111 64.0
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 4.2e-32 142.1 95 73.7
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 4.2e-32 142.1 195 47.2
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 5.5e-32 141.7 108 64.8
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.2e-31 140.6 112 63.4
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.6e-31 140.2 96 68.8
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.6e-31 140.2 175 47.4
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 3.5e-31 139.0 128 57.0
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.6e-31 138.7 109 66.1
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.6e-31 138.7 109 66.1
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 7.9e-31 137.9 108 57.4
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.0e-30 137.5 124 57.3
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 1.3e-30 137.1 129 62.0
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.8e-30 136.7 106 65.1
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.3e-30 136.3 138 53.6
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.0e-30 136.0 96 68.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.9e-30 135.6 109 57.8
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 5.1e-30 135.2 183 45.9
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 6.7e-30 134.8 109 60.6
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.5e-29 133.7 105 60.0
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 5.7e-29 131.7 91 75.8
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 6.9e-27 124.8 72 83.3
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.5e-26 123.6 95 64.2
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.5e-26 123.6 104 56.7
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 4.5e-26 122.1 87 70.1
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 5.9e-26 121.7 104 54.8
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.4e-24 117.1 94 60.6
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 4.2e-24 115.5 138 43.5
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.5e-21 107.1 156 43.6
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 2.0e-21 106.7 181 43.6
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.0e-21 106.7 82 53.7
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.4e-19 100.5 98 44.9
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 3.4e-18 95.9 75 58.7
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.1e-16 90.9 62 71.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 7.2e-16 88.2 90 46.7
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 5.9e-10 68.6 146 36.3
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.9e-09 66.2 40 70.0
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 8.0e-07 58.2 44 65.9


User provided reference genes

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