Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g14200 Schrenkiella parvula HOM05D007342 ORTHO05D009252 4.5e-281 970.7 517 100.0
Thhalv10025032m.g Eutrema salsugineum HOM05D007342 ORTHO05D009252 1.1e-199 700.3 523 75.1
Carub.0007s2583 Capsella rubella HOM05D007342 ORTHO05D009252 6.0e-185 651.4 533 70.0
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 1.5e-183 646.7 532 70.7
BcaC06g33445 Brassica carinata HOM05D007342 ORTHO05D009252 2.4e-173 612.8 527 71.9
C07p47420 Brassica napus HOM05D007342 ORTHO05D009252 2.4e-173 612.8 527 71.9
BolC7t45269H Brassica oleracea HOM05D007342 ORTHO05D009252 2.4e-173 612.8 527 71.9
BraA03t14036Z Brassica rapa HOM05D007342 ORTHO05D009252 4.4e-172 608.6 524 71.6
CARHR290340 Cardamine hirsuta HOM05D007342 ORTHO05D009252 9.3e-170 600.9 530 67.4
A03p49350 Brassica napus HOM05D007342 ORTHO05D009252 2.3e-168 596.3 529 70.3
AT4G15820 Arabidopsis thaliana HOM05D007342 ORTHO05D009252 8.1e-158 561.2 527 63.2
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 6.3e-126 455.3 527 54.1
Aa31LG10G6280 Aethionema arabicum HOM05D007342 ORTHO05D009252 2.3e-120 436.8 528 53.4
BcaC06g32967 Brassica carinata HOM05D007342 ORTHO05D009252 1.2e-89 334.7 252 73.8
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 2.4e-64 250.8 584 37.5
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 5.8e-63 246.1 545 38.2
BcaC06g32966 Brassica carinata HOM05D007342 ORTHO05D009252 9.2e-61 238.8 228 66.2
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 3.3e-58 230.3 565 37.5
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 1.2e-57 228.4 519 38.9
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 8.1e-57 225.7 551 37.7
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 3.1e-56 223.8 532 37.6
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 4.0e-56 223.4 579 36.4
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 9.0e-56 222.2 578 35.8
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 3.4e-55 220.3 582 36.3
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 4.4e-55 219.9 595 35.0
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 4.9e-54 216.5 607 35.6
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 8.4e-54 215.7 616 34.9
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 2.7e-52 210.7 581 35.1
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 2.7e-52 210.7 581 35.1
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 7.8e-52 209.1 581 35.3
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 7.8e-52 209.1 548 36.1
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 1.3e-51 208.4 586 32.6
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 3.4e-47 193.7 596 32.4
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 4.5e-47 193.4 592 34.5
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 7.6e-47 192.6 579 34.7
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 7.6e-47 192.6 615 32.2
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 6.4e-46 189.5 558 31.5
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 3.2e-45 187.2 572 34.3
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 4.2e-45 186.8 568 32.6
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 1.6e-44 184.9 553 35.1
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 4.6e-44 183.3 492 36.8
THA.LOC104820268 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 6.0e-44 183.0 195 54.9
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 1.0e-43 182.2 550 34.2
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 1.0e-43 182.2 530 34.7
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 2.3e-43 181.0 626 30.4
Lsat_1_v5_gn_5_56841 Lactuca sativa HOM05D007342 ORTHO05D009252 1.5e-42 178.3 517 32.1
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 7.4e-42 176.0 606 32.2
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 9.6e-42 175.6 613 31.2
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 3.7e-41 173.7 606 31.0
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 2.0e-39 167.9 569 33.6
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 2.0e-39 167.9 628 31.1
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 2.9e-38 164.1 550 32.2
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 4.9e-38 163.3 616 30.4
Lalb_Chr12g0196601 Lupinus albus HOM05D007342 ORTHO05D009252 1.4e-37 161.8 565 31.7
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 7.1e-37 159.5 533 31.0
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 9.3e-37 159.1 652 30.1
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 1.6e-36 158.3 559 31.3
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 2.1e-36 157.9 642 29.3
Phvul.003G105800 Phaseolus vulgaris HOM05D007342 ORTHO05D009252 3.5e-36 157.1 603 31.0
DCAR_023285 Daucus carota HOM05D007342 ORTHO05D009252 1.0e-35 155.6 545 31.4
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 1.8e-35 154.8 545 31.4
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 3.0e-35 154.1 651 30.4
THA.LOC104810667 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 5.1e-35 153.3 113 70.8
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 1.5e-34 151.8 538 32.2
THA.LOC104820435 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.9e-34 151.4 112 70.5
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 3.3e-34 150.6 634 30.9
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 5.6e-34 149.8 696 27.6
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 9.6e-34 149.1 623 29.2
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 2.8e-33 147.5 519 30.8
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 4.0e-32 143.7 694 26.9
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 2.6e-31 141.0 539 30.2
unitig_37.g12398 Utricularia gibba HOM05D007342 ORTHO05D009252 2.6e-31 141.0 588 31.0
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 3.4e-31 140.6 682 27.9
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 1.4e-29 135.2 505 30.3
CiPaw.01G148300 Carya illinoinensis HOM05D007342 ORTHO05D009252 1.9e-29 134.8 235 38.3
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 4.2e-29 133.7 698 27.5
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 5.5e-29 133.3 534 31.5
vmacro15234 Vaccinium macrocarpon HOM05D007342 ORTHO05D009252 7.1e-29 132.9 572 30.4
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 9.3e-29 132.5 669 28.1
arahy.Tifrunner.gnm1.ann1.4CZB08 Arachis hypogaea HOM05D007342 ORTHO05D009252 1.6e-28 131.7 584 29.1
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 1.6e-28 131.7 545 31.4
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 2.1e-28 131.3 625 29.0
arahy.Tifrunner.gnm1.ann1.0PW7WM Arachis hypogaea HOM05D007342 ORTHO05D009252 2.7e-28 131.0 588 27.9
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 4.6e-28 130.2 598 27.3
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 4.6e-28 130.2 538 30.3
TAR633G2120 Trochodendron aralioides HOM05D007342 ORTHO05D009252 3.3e-26 124.0 251 35.9
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 2.0e-23 114.8 654 26.6
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 5.9e-23 113.2 638 26.0
PSO832G2203 Papaver somniferum HOM05D007342 ORTHO05D009252 1.0e-22 112.5 469 28.8
Oeu045723.1 Olea europaea HOM05D007342 ORTHO05D009252 8.5e-22 109.4 228 37.3
Lalb_Chr07g0177731 Lupinus albus HOM05D007342 ORTHO05D009252 4.2e-21 107.1 124 49.2
Sed0007886 Sechium edule HOM05D007342 ORTHO05D009252 3.9e-19 100.5 379 33.0
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.5e-18 98.6 116 46.6
MBI18_g13693_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 2.0e-18 98.2 326 31.3
Psat4g027440 Pisum sativum HOM05D007342 ORTHO05D009252 2.5e-18 97.8 572 26.7
CDE02G3410 Ceratophyllum demersum HOM05D007342 ORTHO05D009252 2.2e-17 94.7 391 28.1
CsaV3_6G022280 Cucumis sativus L. HOM05D007342 ORTHO05D009252 1.4e-16 92.0 357 33.1
Eucgr.L03117 Eucalyptus grandis HOM05D007342 ORTHO05D009252 3.1e-16 90.9 366 32.5
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 8.5e-14 82.8 144 33.3
HPP92_016942 Vanilla planifolia HOM05D007342 ORTHO05D009252 2.5e-13 81.3 168 31.0
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 9.4e-13 79.3 705 24.7
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 2.7e-12 77.8 109 39.4
DCAR_023500 Daucus carota HOM05D007342 ORTHO05D009252 6.1e-12 76.6 341 27.6
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 1.0e-11 75.9 154 36.4
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 1.8e-11 75.1 122 34.4
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 6.7e-11 73.2 121 29.8
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 8.8e-11 72.8 117 35.0
MBI18_g13694_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 1.1e-10 72.4 719 24.6
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 1.1e-10 72.4 122 32.8
Lj3P820T26 Lonicera japonica HOM05D007342 ORTHO05D009252 1.5e-10 72.0 343 28.3
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 2.6e-10 71.2 123 32.5
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 2.6e-10 71.2 122 32.8
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 4.4e-10 70.5 122 30.3
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.4e-10 70.5 122 30.3
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.4e-10 70.5 122 30.3
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.4e-10 70.5 122 30.3
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.4e-10 70.5 122 30.3
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 5.7e-10 70.1 122 32.8
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 5.7e-10 70.1 122 30.3
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 5.7e-10 70.1 122 30.3
Lj3P817T41 Lonicera japonica HOM05D007342 ORTHO05D009252 7.4e-10 69.7 278 29.5
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 9.7e-10 69.3 122 29.5
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 1.3e-09 68.9 122 32.8
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.3e-09 68.9 122 31.1
MD07G1150100 Malus domestica HOM05D005676 ORTHO05D007375 1.7e-09 68.6 122 31.1
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.7e-09 68.6 122 31.1
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 1.7e-09 68.6 122 32.0
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.7e-09 68.6 122 32.0
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 2.2e-09 68.2 122 32.0
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 2.2e-09 68.2 122 32.8
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 2.2e-09 68.2 122 29.5
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 2.2e-09 68.2 117 30.8
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 2.2e-09 68.2 123 32.5
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 2.2e-09 68.2 122 31.1
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 3.7e-09 67.4 123 31.7
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 3.7e-09 67.4 122 32.8
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 3.7e-09 67.4 119 32.8
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 3.7e-09 67.4 122 31.1
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 4.8e-09 67.0 122 31.1
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 4.8e-09 67.0 118 33.9
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 6.3e-09 66.6 122 28.7
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 6.3e-09 66.6 122 30.3
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 6.3e-09 66.6 122 29.5
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 6.3e-09 66.6 124 32.3
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 1.1e-08 65.9 123 30.9
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 1.4e-08 65.5 122 32.0
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 1.4e-08 65.5 119 31.9
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 1.4e-08 65.5 122 32.0
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 1.4e-08 65.5 122 30.3
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 1.4e-08 65.5 121 31.4
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 1.8e-08 65.1 123 29.3
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 1.8e-08 65.1 124 31.5
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 1.8e-08 65.1 122 31.1
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 1.8e-08 65.1 122 30.3
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 2.4e-08 64.7 249 27.7
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 2.4e-08 64.7 122 29.5
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 2.4e-08 64.7 122 31.1
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 2.4e-08 64.7 124 31.5
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 2.4e-08 64.7 122 29.5
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 2.4e-08 64.7 122 32.0
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 2.4e-08 64.7 122 29.5
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 3.1e-08 64.3 122 30.3
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 4.1e-08 63.9 122 31.1
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 4.1e-08 63.9 122 28.7
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 5.3e-08 63.5 123 28.5
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 5.3e-08 63.5 123 30.1
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 7.0e-08 63.2 123 29.3
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 7.0e-08 63.2 122 30.3
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 1.2e-07 62.4 123 30.9
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 1.2e-07 62.4 122 29.5
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.5e-07 62.0 122 28.7
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 1.5e-07 62.0 122 30.3
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 2.0e-07 61.6 124 29.0
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 2.0e-07 61.6 124 29.0
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 2.0e-07 61.6 122 30.3
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 2.0e-07 61.6 122 28.7
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 2.0e-07 61.6 123 30.9
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 2.0e-07 61.6 118 30.5
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 2.6e-07 61.2 123 28.5
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 2.6e-07 61.2 123 28.5
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 7.7e-07 59.7 124 30.6
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 1.7e-06 58.5 122 28.7
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 2.2e-06 58.2 124 26.6
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 5.0e-06 57.0 110 31.8


User provided reference genes

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