Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g12460 Schrenkiella parvula HOM05D007526 ORTHO05D009350 1.3e-95 353.2 201 100.0
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 3.1e-81 305.4 202 84.2
BcaC02g09320 Brassica carinata HOM05D007526 ORTHO05D009350 2.0e-80 302.8 208 83.7
BolC4t25713H Brassica oleracea HOM05D007526 ORTHO05D009350 2.0e-80 302.8 208 83.7
C04p41350 Brassica napus HOM05D007526 ORTHO05D009350 7.7e-80 300.8 208 83.7
A04p07660 Brassica napus HOM05D007526 ORTHO05D009350 1.7e-79 299.7 208 82.7
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 1.5e-78 296.6 211 82.0
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 2.5e-78 295.8 202 79.7
AL7G41840 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 3.3e-75 285.4 202 77.7
CARHR220600 Cardamine hirsuta HOM05D007526 ORTHO05D009350 1.0e-71 273.9 202 76.2
Carub.0007s2786 Capsella rubella HOM05D007526 ORTHO05D009350 1.3e-63 246.9 223 67.7
AT4G14380 Arabidopsis thaliana HOM05D007526 ORTHO05D009350 3.4e-59 232.3 203 71.4
Sp3g20910 Schrenkiella parvula HOM05D007526 ORTHO05D009350 3.9e-47 192.2 197 56.9
Thhalv10022185m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 1.5e-43 180.3 210 55.2
BolC7t41918H Brassica oleracea HOM05D007526 ORTHO05D009350 1.3e-42 177.2 201 53.7
C07p14270 Brassica napus HOM05D007526 ORTHO05D009350 2.2e-42 176.4 196 53.6
A07p09230 Brassica napus HOM05D007526 ORTHO05D009350 2.9e-42 176.0 196 53.6
Aa31LG9G2940 Aethionema arabicum HOM05D007526 ORTHO05D009350 5.1e-39 165.2 181 55.2
THA.LOC104808623 Tarenaya hassleriana HOM05D007526 ORTHO05D009350 2.1e-37 159.8 201 51.2
BraA07t28719Z Brassica rapa HOM05D007526 ORTHO05D009350 2.8e-37 159.5 181 53.6
CARHR099230 Cardamine hirsuta HOM05D007526 ORTHO05D009350 8.3e-34 147.9 207 46.9
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 8.7e-23 111.3 207 39.6
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 1.9e-22 110.2 207 40.1
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 2.5e-22 109.8 205 37.6
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 9.6e-22 107.8 210 37.6
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 2.0e-19 100.1 204 37.7
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 7.6e-19 98.2 193 36.3
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 7.6e-19 98.2 206 35.0
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 2.2e-18 96.7 198 36.4
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 2.2e-18 96.7 198 35.9
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 4.9e-18 95.5 198 36.4
AL3G37924 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 1.9e-17 93.6 61 77.0
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 1.9e-17 93.6 193 36.3
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 7.1e-17 91.7 194 35.6
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 7.1e-17 91.7 207 35.7
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 9.3e-17 91.3 200 32.5
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 6.0e-16 88.6 184 35.9
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 7.8e-16 88.2 202 33.7
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 7.8e-16 88.2 194 34.5
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 1.0e-15 87.8 201 31.8
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.0e-15 86.3 198 34.3
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 2.5e-14 83.2 205 32.7
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 2.5e-14 83.2 213 33.3
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 3.3e-14 82.8 205 32.7
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 3.3e-14 82.8 206 33.0
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 5.6e-14 82.0 211 33.2
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 1.3e-13 80.9 226 32.7
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 2.8e-13 79.7 204 32.4
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 2.8e-13 79.7 207 32.4
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 1.1e-12 77.8 204 31.4
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 3.1e-12 76.3 202 31.2
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 3.1e-12 76.3 201 29.4
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 3.1e-12 76.3 204 29.4
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 6.9e-12 75.1 209 30.1
COL.COLO4_15878 Corchorus olitorius HOM05D007526 ORTHO05D009350 9.0e-12 74.7 75 57.3
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 2.0e-11 73.6 53 69.8
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 2.6e-11 73.2 210 31.9
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 3.4e-11 72.8 210 31.9
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 3.4e-11 72.8 215 28.8
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 5.8e-11 72.0 198 32.3
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 7.6e-11 71.6 199 32.2
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.3e-10 70.9 203 31.5
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 2.2e-10 70.1 211 32.2
Gohir.D09G230800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.9e-10 69.7 180 28.3
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 2.9e-10 69.7 204 30.9
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 2.9e-10 69.7 209 31.6
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 4.9e-10 68.9 54 70.4
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 8.4e-10 68.2 201 29.4
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.1e-09 67.8 52 65.4
TPR.G1498 Trifolium pratense HOM05D007526 ORTHO05D009350 1.1e-09 67.8 57 57.9
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 1.9e-09 67.0 219 28.8
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 2.4e-09 66.6 233 31.8
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 9.3e-09 64.7 201 30.8
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 3.5e-08 62.8 215 28.8
Medtr1g076110 Medicago truncatula HOM05D007526 ORTHO05D009350 3.5e-08 62.8 54 55.6
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 2.3e-07 60.1 207 26.6
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 3.0e-07 59.7 218 27.1
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.5e-06 57.4 205 27.8


User provided reference genes

Program Settings