Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g11820 Schrenkiella parvula HOM05D011731 ORTHO05D015379 9.8e-283 976.1 480 100.0
Sp7g02500 Schrenkiella parvula HOM05D011769 ORTHO05D011321 3.5e-115 419.5 367 59.1
Sp6g07940 Schrenkiella parvula HOM05D011769 ORTHO05D000065 4.0e-82 309.7 207 70.0
BolC3t19522H Brassica oleracea HOM05D000017 ORTHO05D000013 1.3e-56 224.9 592 28.7
BcaC07g37698 Brassica carinata HOM05D011731 ORTHO05D015379 2.6e-33 147.5 112 75.0
Thhalv10026773m.g Eutrema salsugineum HOM05D009848 ORTHO05D011321 3.8e-32 143.7 427 26.9
CARHR220030 Cardamine hirsuta HOM05D011731 ORTHO05D015379 1.9e-31 141.4 115 67.0
BcaB04g18101 Brassica carinata HOM05D011731 ORTHO05D015379 6.0e-30 136.3 112 64.3
Carub.0006s2552 Capsella rubella HOM05D011769 ORTHO05D011321 5.1e-29 133.3 164 43.9
Thhalv10026592m.g Eutrema salsugineum HOM05D011731 ORTHO05D015379 3.3e-28 130.6 115 63.5
Carub.0007s2840 Capsella rubella HOM05D011731 ORTHO05D015379 5.6e-28 129.8 115 63.5
BcaB08g35720 Brassica carinata HOM05D009848 ORTHO05D011321 6.2e-27 126.3 98 58.2
AL7G42410 Arabidopsis lyrata HOM05D011731 ORTHO05D015379 4.0e-26 123.6 115 61.7
Sp4g03790 Schrenkiella parvula HOM05D011769 ORTHO05D011321 5.3e-26 123.2 229 38.0
AT4G14020 Arabidopsis thaliana HOM05D011731 ORTHO05D015379 2.6e-25 120.9 115 60.0
BolC8t48087H Brassica oleracea HOM05D011731 ORTHO05D015379 5.8e-25 119.8 112 66.1
THA.LOC104804792 Tarenaya hassleriana HOM05D011731 ORTHO05D015379 3.8e-24 117.1 119 52.1
A08p10240 Brassica napus HOM05D011731 ORTHO05D015379 1.0e-21 109.0 112 64.3
BraA08t33021Z Brassica rapa HOM05D011731 ORTHO05D015379 1.0e-21 109.0 112 64.3
Sp5g15340 Schrenkiella parvula HOM05D009848 ORTHO05D011321 1.3e-21 108.6 237 30.8
Sp7g05950 Schrenkiella parvula HOM05D011731 ORTHO05D000065 3.0e-21 107.5 156 41.7
SpUn0146_0040 Schrenkiella parvula HOM05D009848 ORTHO05D011321 1.1e-20 105.5 165 37.0
A04p20160 Brassica napus HOM05D000017 ORTHO05D000013 9.6e-20 102.4 209 31.1
BolC3t20406H Brassica oleracea HOM05D011769 ORTHO05D011321 1.1e-18 99.0 246 30.1
BolC1t02773H Brassica oleracea HOM05D011769 ORTHO05D011321 5.3e-18 96.7 236 30.1
C04p28300 Brassica napus HOM05D025359 ORTHO05D017700 1.5e-17 95.1 110 46.4
BolC9t55388H Brassica oleracea HOM05D011769 ORTHO05D011321 3.4e-17 94.0 246 30.1
Sp5g22230 Schrenkiella parvula HOM05D009848 ORTHO05D011321 7.6e-17 92.8 179 31.3
Sp4g05230 Schrenkiella parvula HOM05D009848 ORTHO05D011321 3.8e-16 90.5 219 27.4
BcaC05g25375 Brassica carinata HOM05D011731 ORTHO05D039789 6.0e-14 83.2 75 49.3
BolC9t55106H Brassica oleracea HOM05D000017 ORTHO05D000013 3.9e-13 80.5 90 43.3
CARHR153110 Cardamine hirsuta HOM05D009848 ORTHO05D011321 7.4e-12 76.3 181 27.1
Sp6g02770 Schrenkiella parvula HOM05D009848 ORTHO05D011321 7.4e-12 76.3 139 31.7
C04p45240 Brassica napus HOM05D011769 ORTHO05D011321 9.6e-12 75.9 166 30.7
BolC4t26106H Brassica oleracea HOM05D011769 ORTHO05D011321 1.6e-11 75.1 166 30.7
BolC7t41009H Brassica oleracea HOM05D011769 ORTHO05D011321 1.8e-10 71.6 130 31.5
Sp3g29290 Schrenkiella parvula HOM05D011769 ORTHO05D011321 3.1e-10 70.9 92 35.9
Sp7g06810 Schrenkiella parvula HOM05D009848 ORTHO05D011321 1.5e-09 68.6 110 34.5
Sp7g12140 Schrenkiella parvula HOM05D000017 ORTHO05D017700 2.0e-09 68.2 39 82.1
THA.LOC104817595 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.5e-09 67.0 88 42.0
THA.LOC104810169 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.0e-08 65.9 88 40.9
Sp6g09910 Schrenkiella parvula HOM05D009848 ORTHO05D028309 1.7e-08 65.1 88 38.6
THA.LOC104806013 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-08 65.1 88 42.0
BolC7t43192H Brassica oleracea HOM05D011731 ORTHO05D039789 2.2e-08 64.7 54 53.7
THA.LOC104821184 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.2e-08 64.7 88 42.0
THA.LOC104809682 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.9e-08 63.5 88 40.9
THA.LOC104801928 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.5e-08 63.2 86 41.9
BraA08t33502Z Brassica rapa HOM05D009848 ORTHO05D011321 8.4e-08 62.8 151 27.2
THA.LOC104800229 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.3e-07 59.3 73 42.5
THA.LOC104813303 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.2e-06 58.9 73 39.7
THA.LOC104815131 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.2e-06 58.9 73 39.7
Sp6g12310 Schrenkiella parvula HOM05D009848 ORTHO05D011321 2.1e-06 58.2 156 30.8
THA.LOC104808850 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.1e-06 58.2 89 34.8
THA.LOC104820572 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.7e-06 57.8 89 37.1
THA.LOC104826793 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.5e-06 57.4 73 43.8
BolC4t25917H Brassica oleracea HOM05D012975 ORTHO05D015956 4.6e-06 57.0 72 41.7


User provided reference genes

Program Settings