Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g11210 Schrenkiella parvula HOM05D000053 ORTHO05D000035 4.6e-69 264.6 150 100.0
C04p42070 Brassica napus HOM05D000053 ORTHO05D000035 3.4e-16 89.0 67 70.1
A08p06550 Brassica napus HOM05D000053 ORTHO05D000035 5.9e-16 88.2 55 72.7
Sp7g11200 Schrenkiella parvula HOM05D000053 ORTHO05D000035 1.7e-15 86.7 51 80.4
Sp7g11700 Schrenkiella parvula HOM05D000053 ORTHO05D000035 2.2e-15 86.3 55 72.7
BraA04t16514Z Brassica rapa HOM05D000053 ORTHO05D000035 8.5e-15 84.3 54 70.4
CARHR219720 Cardamine hirsuta HOM05D000053 ORTHO05D000035 2.5e-14 82.8 62 67.7
Thhalv10024378m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 2.5e-14 82.8 67 62.7
A04p08370 Brassica napus HOM05D000053 ORTHO05D000035 9.3e-14 80.9 67 65.7
BraA01t02224Z Brassica rapa HOM05D000053 ORTHO05D000035 4.6e-13 78.6 51 72.5
BcaC09g50127 Brassica carinata HOM05D000053 ORTHO05D000035 1.0e-12 77.4 62 62.9
C01p28750 Brassica napus HOM05D000053 ORTHO05D000035 1.0e-12 77.4 62 62.9
BolC1t02799H Brassica oleracea HOM05D000053 ORTHO05D000035 1.0e-12 77.4 62 62.9
BcaNung00356 Brassica carinata HOM05D000053 ORTHO05D000035 1.8e-12 76.6 56 66.1
A04p08320 Brassica napus HOM05D000053 ORTHO05D000035 1.8e-12 76.6 51 76.5
BraA01t02223Z Brassica rapa HOM05D000053 ORTHO05D000035 1.8e-12 76.6 56 62.5
BraA08t32670Z Brassica rapa HOM05D000053 ORTHO05D000035 1.8e-12 76.6 47 74.5
A01p23090 Brassica napus HOM05D000053 ORTHO05D000035 2.3e-12 76.3 51 70.6
A01p23140 Brassica napus HOM05D000053 ORTHO05D000035 2.3e-12 76.3 51 70.6
BcaC09g50128 Brassica carinata HOM05D000053 ORTHO05D000035 3.0e-12 75.9 62 61.3
BcaC09g50129 Brassica carinata HOM05D000053 ORTHO05D000035 3.0e-12 75.9 62 61.3
BcaNung00359 Brassica carinata HOM05D000053 ORTHO05D000035 3.0e-12 75.9 57 63.2
C01p28720 Brassica napus HOM05D000053 ORTHO05D000035 3.0e-12 75.9 62 61.3
BraA01t02222Z Brassica rapa HOM05D000053 ORTHO05D000035 3.0e-12 75.9 62 61.3
BcaB02g08646 Brassica carinata HOM05D000053 ORTHO05D000035 8.8e-12 74.3 54 68.5
BcaB04g17640 Brassica carinata HOM05D000053 ORTHO05D000035 8.8e-12 74.3 55 67.3
BolC4t25791H Brassica oleracea HOM05D000053 ORTHO05D000035 8.8e-12 74.3 57 71.9
CARHR219700 Cardamine hirsuta HOM05D000053 ORTHO05D000035 1.5e-11 73.6 64 57.8
A04p08350 Brassica napus HOM05D000053 ORTHO05D000035 1.9e-11 73.2 50 72.0
C04p42050 Brassica napus HOM05D000053 ORTHO05D000035 1.9e-11 73.2 50 72.0
BcaC07g37321 Brassica carinata HOM05D000053 ORTHO05D000035 3.3e-11 72.4 45 71.1
C08p07590 Brassica napus HOM05D000053 ORTHO05D000035 3.3e-11 72.4 45 71.1
BolC8t47606H Brassica oleracea HOM05D000053 ORTHO05D000035 3.3e-11 72.4 45 71.1
A01p23080 Brassica napus HOM05D000053 ORTHO05D000035 4.3e-11 72.0 56 58.9
AL7G42710 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 5.7e-11 71.6 54 64.8
AT4G13880 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 3.7e-10 68.9 56 64.3
BcaB01g00056 Brassica carinata HOM05D000053 ORTHO05D000035 4.8e-10 68.6 51 72.5
Thhalv10024074m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 4.8e-10 68.6 66 56.1
BolC4t25790H Brassica oleracea HOM05D000053 ORTHO05D000035 1.1e-09 67.4 42 76.2
BolC8t50742H Brassica oleracea HOM05D000053 ORTHO05D000035 1.4e-09 67.0 51 68.6
AT4G13820 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 2.4e-09 66.2 43 79.1
C08p31190 Brassica napus HOM05D000053 ORTHO05D000035 2.4e-09 66.2 51 70.6
BraA04t16523Z Brassica rapa HOM05D000053 ORTHO05D000035 3.1e-09 65.9 41 75.6
BraA04t16515Z Brassica rapa HOM05D000053 ORTHO05D000035 1.2e-08 63.9 41 78.0
BcaC02g09386 Brassica carinata HOM05D000053 ORTHO05D000035 1.5e-08 63.5 45 71.1
BcaC07g39908 Brassica carinata HOM05D000053 ORTHO05D000035 1.5e-08 63.5 43 72.1
Carub.0007s2856 Capsella rubella HOM05D000053 ORTHO05D000035 3.4e-08 62.4 63 52.4
Carub.0015s0020 Capsella rubella HOM05D000053 ORTHO05D000035 3.4e-08 62.4 47 66.0
BraA01t02221Z Brassica rapa HOM05D000053 ORTHO05D000035 7.7e-08 61.2 48 60.4
Carub.0007s2863 Capsella rubella HOM05D000053 ORTHO05D000035 7.7e-08 61.2 58 58.6
BcaC02g09381 Brassica carinata HOM05D000053 ORTHO05D000035 1.3e-07 60.5 42 73.8
Thhalv10026889m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 2.9e-07 59.3 42 66.7
AL7G42590 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 5.0e-07 58.5 50 60.0
AT4G13920 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 6.5e-07 58.2 59 57.6
BcaB02g08649 Brassica carinata HOM05D000053 ORTHO05D000035 8.5e-07 57.8 42 69.0
Carub.0007s2862 Capsella rubella HOM05D000053 ORTHO05D000035 8.5e-07 57.8 46 67.4


User provided reference genes

Program Settings