Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g10080 Schrenkiella parvula HOM05D013968 ORTHO05D000065 1.1e-75 286.6 152 100.0
Sp6g01030 Schrenkiella parvula HOM05D000313 ORTHO05D000065 5.9e-32 141.4 168 51.8
SpUn0001_0900 Schrenkiella parvula HOM05D000313 ORTHO05D000065 8.0e-29 131.0 178 46.1
BcaC04g20435 Brassica carinata HOM05D000305 ORTHO05D000065 3.5e-24 115.5 168 45.2
A09p69300 Brassica napus HOM05D000305 ORTHO05D000065 3.5e-24 115.5 168 45.2
BolC8t52920H Brassica oleracea HOM05D000305 ORTHO05D000065 3.5e-24 115.5 168 45.2
Sp4g05770 Schrenkiella parvula HOM05D000313 ORTHO05D000065 3.8e-23 112.1 151 47.7
Sp1g33160 Schrenkiella parvula HOM05D013968 ORTHO05D000065 5.2e-20 101.7 97 59.8
Sp4g05170 Schrenkiella parvula HOM05D013968 ORTHO05D000065 3.4e-19 99.0 151 41.1
CARHR217650 Cardamine hirsuta HOM05D000305 ORTHO05D000065 5.7e-19 98.2 166 38.0
BcaB08g35018 Brassica carinata HOM05D000305 ORTHO05D000065 1.6e-16 90.1 161 41.6
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-15 86.7 164 37.2
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-15 85.1 165 37.6
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 5.0e-15 85.1 165 37.6
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-14 81.6 162 38.9
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-13 80.5 152 36.8
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-13 78.6 164 36.6
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 8.0e-13 77.8 164 32.9
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-12 77.4 165 35.2
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-12 77.4 165 35.2
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 1.0e-12 77.4 164 32.9
Thhalv10026769m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.0e-12 75.9 91 49.5
Sp5g18020 Schrenkiella parvula HOM05D000313 ORTHO05D000065 4.0e-12 75.5 115 47.8
Sp7g07020 Schrenkiella parvula HOM05D013968 ORTHO05D000065 5.2e-12 75.1 135 37.0
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 6.8e-12 74.7 165 34.5
A09p30420 Brassica napus HOM05D000305 ORTHO05D000065 8.9e-12 74.3 164 31.7
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 8.9e-12 74.3 164 31.7
BraA09t38611Z Brassica rapa HOM05D000305 ORTHO05D000065 8.9e-12 74.3 164 31.7
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 8.9e-12 74.3 164 31.7
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-11 73.2 164 34.1
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-11 72.8 165 33.9
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-11 72.4 165 33.9
BolC6t36306H Brassica oleracea HOM05D000313 ORTHO05D000065 5.7e-11 71.6 145 35.9
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 2.9e-10 69.3 159 33.3
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-10 68.9 165 33.9
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-10 68.2 165 33.9
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-10 68.2 165 33.9
THA.LOC104822029 Tarenaya hassleriana HOM05D000305 ORTHO05D000065 1.4e-09 67.0 167 31.7
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-09 66.6 149 36.2
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-09 66.6 149 36.2
C03p74100 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-09 65.9 165 32.7
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 3.2e-09 65.9 188 29.3
Sp5g18790 Schrenkiella parvula HOM05D013968 ORTHO05D000065 5.4e-09 65.1 68 52.9
AL1G39460 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 7.0e-09 64.7 93 43.0
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-09 64.7 165 33.9
BcaC08g45074 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 63.9 153 34.6
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-08 63.2 152 31.6
SpUn0002_0150 Schrenkiella parvula HOM05D000313 ORTHO05D000065 2.0e-08 63.2 58 63.8
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-08 62.4 165 33.3
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-08 62.4 165 32.7
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-08 62.4 165 33.3
BolC8t46968H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-08 62.0 162 33.3
C04p18760 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-08 61.2 150 32.0
Thhalv10000462m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.0e-07 60.8 98 41.8
Thhalv10005358m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.0e-07 60.8 103 41.7
Thhalv10009766m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.0e-07 60.8 103 41.7
C06p11720 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-07 60.1 141 33.3
BraA09t38529Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-07 60.1 165 30.3
Sp1g33210 Schrenkiella parvula HOM05D000313 ORTHO05D000065 2.3e-07 59.7 51 60.8
SpUn0003_0110 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.3e-07 59.7 67 50.7
AT1G14800 Arabidopsis thaliana HOM05D000313 ORTHO05D000065 3.0e-07 59.3 103 39.8
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-07 58.5 190 28.9
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 5.0e-07 58.5 170 31.8
BcaB06g27784 Brassica carinata HOM05D000305 ORTHO05D000065 6.6e-07 58.2 172 29.1
C06p14800 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-07 57.8 168 31.0
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-06 57.0 156 30.8
C08p01650 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-06 56.6 161 31.1
C07p50350 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-06 55.8 103 36.9
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-06 55.8 161 29.2
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-06 55.5 149 28.9
C02p26880 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-06 55.5 155 31.0
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 9.5e-06 54.3 157 29.3
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-06 54.3 168 28.0
BolC6t36658H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-06 54.3 155 31.0
Sp3g24790 Schrenkiella parvula HOM05D000313 ORTHO05D000065 9.5e-06 54.3 91 42.9


User provided reference genes

Program Settings