Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g09170 Schrenkiella parvula HOM05D011363 ORTHO05D003044 8.8e-296 1019.6 544 100.0
Sp5g17690 Schrenkiella parvula HOM05D011363 ORTHO05D003044 4.6e-111 406.0 481 54.9
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 4.6e-103 379.4 406 60.1
Sp4g07070 Schrenkiella parvula HOM05D011363 ORTHO05D003044 2.4e-99 367.1 507 51.9
Sp7g08790 Schrenkiella parvula HOM05D011363 ORTHO05D003044 1.1e-96 358.2 329 64.1
Sp7g09070 Schrenkiella parvula HOM05D011363 ORTHO05D003044 7.0e-67 259.2 474 40.9
Sp4g09310 Schrenkiella parvula HOM05D011363 ORTHO05D003044 5.9e-58 229.6 457 40.9
Sp4g06280 Schrenkiella parvula HOM05D011363 ORTHO05D003044 3.0e-54 217.2 576 35.9
Sp5g19060 Schrenkiella parvula HOM05D013737 ORTHO05D014679 2.9e-41 174.1 633 31.3
Sp1g33290 Schrenkiella parvula HOM05D000675 ORTHO05D014679 1.7e-36 158.3 548 29.9
SpUn0772_0010 Schrenkiella parvula HOM05D013737 ORTHO05D014679 9.2e-27 125.9 369 35.2
Sp3g26810 Schrenkiella parvula HOM05D013737 ORTHO05D014679 9.5e-24 115.9 80 73.8
Sp6g10180 Schrenkiella parvula HOM05D011363 ORTHO05D003044 9.5e-24 115.9 513 26.7
Sp7g08070 Schrenkiella parvula HOM05D013737 ORTHO05D014679 6.2e-23 113.2 145 45.5
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-16 91.7 105 44.8
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-16 91.7 105 44.8
Sp2g08210 Schrenkiella parvula HOM05D000675 ORTHO05D014679 3.3e-16 90.9 177 37.3
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-14 85.9 131 38.9
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 1.1e-14 85.9 131 38.9
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-14 84.3 175 34.9
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 4.0e-14 84.0 105 42.9
SpUn0034_0010 Schrenkiella parvula HOM05D000675 ORTHO05D000395 4.0e-14 84.0 67 70.1
A01p22900 Brassica napus HOM05D000675 ORTHO05D003044 5.2e-14 83.6 125 39.2
BraA07t28286Z Brassica rapa HOM05D000675 ORTHO05D000395 1.2e-13 82.4 86 47.7
A10p26180 Brassica napus HOM05D000675 ORTHO05D000395 1.5e-13 82.0 131 37.4
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 2.0e-13 81.6 158 37.3
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 3.4e-13 80.9 110 43.6
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-13 80.5 578 25.4
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-13 80.5 108 44.4
Sp6g06400 Schrenkiella parvula HOM05D000675 ORTHO05D022104 4.4e-13 80.5 84 46.4
Sp2g07150 Schrenkiella parvula HOM05D024191 ORTHO05D022104 5.8e-13 80.1 83 50.6
C05p32160 Brassica napus HOM05D000675 ORTHO05D023661 9.9e-13 79.3 125 36.0
BolC3t19417H Brassica oleracea HOM05D000675 ORTHO05D018598 9.9e-13 79.3 105 41.0
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 1.7e-12 78.6 101 41.6
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 2.2e-12 78.2 97 44.3
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 2.9e-12 77.8 108 44.4
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 2.9e-12 77.8 108 44.4
Sp5g19270 Schrenkiella parvula HOM05D011363 ORTHO05D003044 2.9e-12 77.8 167 40.1
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 4.9e-12 77.0 108 41.7
BraA01t02203Z Brassica rapa HOM05D000675 ORTHO05D003044 4.9e-12 77.0 111 43.2
BolC4t23150H Brassica oleracea HOM05D000675 ORTHO05D000395 8.4e-12 76.3 108 44.4
Thhalv10029439m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.4e-12 76.3 122 35.2
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-11 75.9 161 34.2
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-11 75.9 161 34.2
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-11 74.7 105 40.0
BcaC01g02627 Brassica carinata HOM05D000675 ORTHO05D013510 2.4e-11 74.7 100 44.0
BcaC09g49036 Brassica carinata HOM05D000675 ORTHO05D013510 2.4e-11 74.7 100 43.0
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-11 74.3 110 41.8
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 3.2e-11 74.3 97 42.3
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 3.2e-11 74.3 97 42.3
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 4.1e-11 73.9 97 42.3
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-11 73.6 561 24.4
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 7.1e-11 73.2 97 41.2
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 9.2e-11 72.8 97 42.3
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 9.2e-11 72.8 97 42.3
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-10 72.0 105 41.0
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-10 72.0 100 43.0
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 1.6e-10 72.0 124 38.7
BcaC02g09509 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-10 71.6 97 41.2
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-10 71.6 97 41.2
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-10 71.6 100 42.0
BraA04t16728Z Brassica rapa HOM05D000675 ORTHO05D000395 2.1e-10 71.6 100 43.0
Sp4g05310 Schrenkiella parvula HOM05D000675 ORTHO05D014679 2.1e-10 71.6 107 47.7
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-10 71.2 97 42.3
BolC7t41640H Brassica oleracea HOM05D000675 ORTHO05D000395 2.7e-10 71.2 100 41.0
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 2.7e-10 71.2 97 42.3
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 2.7e-10 71.2 559 23.8
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 2.7e-10 71.2 97 43.3
AL5G20660 Arabidopsis lyrata HOM05D000675 ORTHO05D023661 3.5e-10 70.9 101 37.6
AL5G20690 Arabidopsis lyrata HOM05D000675 ORTHO05D023661 3.5e-10 70.9 101 37.6
C01p14790 Brassica napus HOM05D000675 ORTHO05D000395 4.6e-10 70.5 97 40.2
BcaC02g10974 Brassica carinata HOM05D000675 ORTHO05D000395 6.0e-10 70.1 83 45.8
BolC3t17251H Brassica oleracea HOM05D000675 ORTHO05D000395 6.0e-10 70.1 108 42.6
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 7.8e-10 69.7 104 41.3
BraA05t19894Z Brassica rapa HOM05D000675 ORTHO05D022104 1.0e-09 69.3 81 42.0
Thhalv10029293m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.0e-09 69.3 126 37.3
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-09 68.9 97 40.2
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 1.3e-09 68.9 85 43.5
Thhalv10002316m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.3e-09 68.9 124 33.9
Thhalv10027512m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.3e-09 68.9 113 36.3
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-09 68.6 125 35.2
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 1.7e-09 68.6 97 40.2
BolC9t54103H Brassica oleracea HOM05D000675 ORTHO05D011634 1.7e-09 68.6 97 38.1
BcaB05g22797 Brassica carinata HOM05D000675 ORTHO05D003044 2.3e-09 68.2 100 39.0
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-09 68.2 108 42.6
C03p68450 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-09 68.2 108 40.7
BolC3t19077H Brassica oleracea HOM05D000675 ORTHO05D000395 2.3e-09 68.2 108 40.7
Carub.0008s0715 Capsella rubella HOM05D000675 ORTHO05D000395 2.3e-09 68.2 74 47.3
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 3.0e-09 67.8 97 38.1
C07p21230 Brassica napus HOM05D000675 ORTHO05D000395 3.0e-09 67.8 97 38.1
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-09 67.4 108 39.8
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-09 67.4 97 39.2
C04p19400 Brassica napus HOM05D000675 ORTHO05D000395 3.9e-09 67.4 108 39.8
BolC8t47199H Brassica oleracea HOM05D000675 ORTHO05D000395 3.9e-09 67.4 122 36.1
BraA05t22466Z Brassica rapa HOM05D000675 ORTHO05D000395 3.9e-09 67.4 108 42.6
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-09 67.0 326 25.5
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-09 67.0 105 39.0
BcaC08g45973 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-09 67.0 94 40.4
A09p33950 Brassica napus HOM05D000675 ORTHO05D000395 5.1e-09 67.0 580 24.5
C02p54990 Brassica napus HOM05D000675 ORTHO05D000395 5.1e-09 67.0 161 30.4
BolC2t06854H Brassica oleracea HOM05D000675 ORTHO05D000395 5.1e-09 67.0 108 40.7
BolC8t47167H Brassica oleracea HOM05D000675 ORTHO05D000395 5.1e-09 67.0 86 44.2
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 6.6e-09 66.6 97 43.3
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 6.6e-09 66.6 108 40.7
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 6.6e-09 66.6 167 30.5
BcaB05g24759 Brassica carinata HOM05D000675 ORTHO05D000395 8.6e-09 66.2 96 40.6
A07p06060 Brassica napus HOM05D000675 ORTHO05D020104 8.6e-09 66.2 85 42.4
C04p22730 Brassica napus HOM05D000675 ORTHO05D000395 8.6e-09 66.2 80 43.8
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 8.6e-09 66.2 92 40.2
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-08 65.9 97 40.2
C04p11110 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-08 65.9 88 42.0
BolC4t22759H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-08 65.9 88 42.0
Thhalv10024063m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.5e-08 65.5 125 36.0
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 1.9e-08 65.1 136 35.3
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 1.9e-08 65.1 88 39.8
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-08 63.9 601 22.6
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-08 63.9 106 37.7
BcaC02g07514 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-08 63.9 104 39.4
BolC1t03531H Brassica oleracea HOM05D000675 ORTHO05D000395 4.3e-08 63.9 92 37.0
BolC4t28102H Brassica oleracea HOM05D000675 ORTHO05D000395 4.3e-08 63.9 104 39.4
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 4.3e-08 63.9 81 39.5
C07p33000 Brassica napus HOM05D000675 ORTHO05D000395 5.6e-08 63.5 86 41.9
BraA02t09250Z Brassica rapa HOM05D000675 ORTHO05D000395 5.6e-08 63.5 88 40.9
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 7.3e-08 63.2 88 40.9
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 7.3e-08 63.2 83 42.2
C03p47130 Brassica napus HOM05D000675 ORTHO05D000395 7.3e-08 63.2 91 40.7
C03p58380 Brassica napus HOM05D000675 ORTHO05D000395 7.3e-08 63.2 88 40.9
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 9.6e-08 62.8 110 39.1
A09p51440 Brassica napus HOM05D000675 ORTHO05D000395 9.6e-08 62.8 89 42.7
Carub.0002s1170 Capsella rubella HOM05D000675 ORTHO05D000395 9.6e-08 62.8 65 50.8
BcaB08g36276 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-07 62.4 297 28.6
A05p09860 Brassica napus HOM05D000675 ORTHO05D002086 1.2e-07 62.4 106 35.8
CARHR283860 Cardamine hirsuta HOM05D000675 ORTHO05D000395 2.1e-07 61.6 104 37.5
Sp2g05590 Schrenkiella parvula HOM05D011363 ORTHO05D014679 2.1e-07 61.6 45 68.9
C05p17930 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-07 61.2 97 37.1
Carub.0029s0003 Capsella rubella HOM05D000675 ORTHO05D000395 2.8e-07 61.2 81 39.5
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-07 60.8 97 35.1
BolC1t04030H Brassica oleracea HOM05D000675 ORTHO05D000395 3.6e-07 60.8 75 45.3
BolC7t41255H Brassica oleracea HOM05D000675 ORTHO05D013510 3.6e-07 60.8 61 49.2
Sp4g08100 Schrenkiella parvula HOM05D024191 ORTHO05D022104 3.6e-07 60.8 148 32.4
BolC5t30500H Brassica oleracea HOM05D000675 ORTHO05D000395 4.7e-07 60.5 97 36.1
Thhalv10015254m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.7e-07 60.5 116 31.9
Thhalv10015776m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.7e-07 60.5 113 32.7
Carub.0006s2657 Capsella rubella HOM05D000675 ORTHO05D000395 6.2e-07 60.1 74 44.6
Thhalv10002281m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.2e-07 60.1 99 38.4
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 8.1e-07 59.7 144 31.9
A07p03370 Brassica napus HOM05D000675 ORTHO05D000395 8.1e-07 59.7 84 44.0
C05p25460 Brassica napus HOM05D000675 ORTHO05D000395 8.1e-07 59.7 83 42.2
Thhalv10012388m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.1e-07 59.7 106 34.9
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-06 59.3 566 22.1
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-06 59.3 566 22.1
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-06 58.9 96 33.3
BcaC09g49894 Brassica carinata HOM05D000675 ORTHO05D013510 1.4e-06 58.9 47 57.4
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-06 58.9 603 25.7
BcaB06g25860 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-06 58.5 83 39.8
BolC4t24329H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-06 58.5 61 45.9
Sp5g20420 Schrenkiella parvula HOM05D000675 ORTHO05D014679 2.4e-06 58.2 99 37.4
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-06 57.8 76 44.7
Sp7g09510 Schrenkiella parvula HOM05D011363 ORTHO05D003044 3.1e-06 57.8 231 28.6
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 4.0e-06 57.4 47 55.3
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 5.2e-06 57.0 68 48.5
Thhalv10012358m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.2e-06 57.0 122 31.1
Thhalv10002344m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.8e-06 56.6 112 33.9
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 8.9e-06 56.2 83 39.8
Thhalv10000600m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.9e-06 56.2 112 33.9
Thhalv10015690m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.9e-06 56.2 112 33.0


User provided reference genes

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