Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g09080 Schrenkiella parvula HOM05D006142 ORTHO05D371143 0.0e+00 1974.1 1013 100.0
Sp4g09320 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.7e-114 418.3 303 78.2
Sp7g08780 Schrenkiella parvula HOM05D006142 ORTHO05D010451 7.3e-102 376.3 292 66.8
Sp5g17870 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.6e-91 341.3 242 72.3
Sp7g09160 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.6e-80 305.4 342 57.6
Sp5g17600 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.7e-79 302.0 185 81.1
Sp3g28050 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.7e-71 275.4 383 43.3
Sp6g10170 Schrenkiella parvula HOM05D006142 ORTHO05D371385 7.6e-67 260.0 217 61.8
Sp5g17680 Schrenkiella parvula HOM05D006142 ORTHO05D371242 2.9e-66 258.1 298 54.7
Sp3g26800 Schrenkiella parvula HOM05D006142 ORTHO05D010451 7.4e-62 243.4 253 51.0
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.7e-61 241.1 451 37.7
Sp1g33280 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.1e-57 229.6 257 49.8
Sp2g08200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 7.4e-54 216.9 383 37.3
Sp4g04580 Schrenkiella parvula HOM05D000327 ORTHO05D000218 7.9e-48 196.8 211 55.0
Sp4g04560 Schrenkiella parvula HOM05D006142 ORTHO05D000218 3.0e-47 194.9 162 64.8
Sp7g08100 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.4e-33 149.4 181 48.1
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 7.9e-32 143.7 459 29.0
Sp2g07090 Schrenkiella parvula HOM05D006142 ORTHO05D010451 8.8e-31 140.2 231 37.2
C07p04730 Brassica napus HOM05D006142 ORTHO05D020039 1.3e-26 126.3 388 26.5
Sp5g19070 Schrenkiella parvula HOM05D006142 ORTHO05D010451 6.5e-26 124.0 148 44.6
Sp3g25980 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.1e-25 123.2 78 78.2
Sp3g24640 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.2e-24 119.8 212 38.2
Sp6g12110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.6e-24 118.2 107 55.1
SpUn0002_0260 Schrenkiella parvula HOM05D006142 ORTHO05D010451 6.1e-24 117.5 202 35.6
Sp4g08110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.0e-23 116.7 175 41.7
Sp7g08090 Schrenkiella parvula HOM05D006142 ORTHO05D000013 1.0e-23 116.7 98 60.2
C08p03660 Brassica napus HOM05D006142 ORTHO05D010451 1.8e-23 115.9 226 32.7
Sp2g07350 Schrenkiella parvula HOM05D006142 ORTHO05D010451 8.8e-23 113.6 174 38.5
BolC8t48132H Brassica oleracea HOM05D006142 ORTHO05D020039 1.1e-22 113.2 389 28.0
BcaC08g45575 Brassica carinata HOM05D006142 ORTHO05D023852 2.6e-22 112.1 224 33.0
A01p22910 Brassica napus HOM05D006142 ORTHO05D020039 1.3e-21 109.8 423 26.2
BraA01t02204Z Brassica rapa HOM05D006142 ORTHO05D020039 1.3e-21 109.8 423 26.2
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 4.8e-21 107.8 240 33.3
BraA02t07853Z Brassica rapa HOM05D006142 ORTHO05D020039 4.1e-20 104.8 433 25.6
BolC4t22346H Brassica oleracea HOM05D006142 ORTHO05D023852 7.0e-20 104.0 232 34.1
BraA02t09249Z Brassica rapa HOM05D006142 ORTHO05D023852 1.6e-19 102.8 246 32.1
C04p19380 Brassica napus HOM05D006142 ORTHO05D024119 1.0e-18 100.1 202 35.6
BolC4t23470H Brassica oleracea HOM05D006142 ORTHO05D024119 1.0e-18 100.1 202 35.6
Sp7g04550 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.2e-18 99.0 181 33.1
Sp2g07140 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.5e-17 95.5 187 34.2
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 9.4e-17 93.6 85 52.9
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 2.1e-16 92.4 85 48.2
Sp5g18990 Schrenkiella parvula HOM05D006142 ORTHO05D372452 2.1e-16 92.4 118 40.7
C04p22760 Brassica napus HOM05D006142 ORTHO05D027476 1.4e-15 89.7 244 29.9
C04p39100 Brassica napus HOM05D000017 ORTHO05D000013 1.4e-15 89.7 83 53.0
Sp1g33350 Schrenkiella parvula HOM05D006142 ORTHO05D371510 1.4e-15 89.7 90 56.7
BolC2t09931H Brassica oleracea HOM05D000017 ORTHO05D000013 6.7e-15 87.4 85 47.1
C06p36610 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-14 86.3 83 48.2
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 2.0e-14 85.9 83 50.6
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 7.5e-14 84.0 94 45.7
A02p36610 Brassica napus HOM05D000017 ORTHO05D000013 9.7e-14 83.6 83 47.0
BraA02t08656Z Brassica rapa HOM05D000017 ORTHO05D000013 9.7e-14 83.6 83 47.0
Sp3g23700 Schrenkiella parvula HOM05D032458 ORTHO05D010632 9.7e-14 83.6 62 67.7
SpUn0094_0020 Schrenkiella parvula HOM05D006142 ORTHO05D010451 9.7e-14 83.6 85 50.6
C03p72500 Brassica napus HOM05D000017 ORTHO05D000013 2.2e-13 82.4 114 39.5
BolC4t25939H Brassica oleracea HOM05D006142 ORTHO05D023852 4.8e-13 81.3 196 31.1
BcaC02g09206 Brassica carinata HOM05D006142 ORTHO05D031894 6.3e-13 80.9 111 41.4
C03p78180 Brassica napus HOM05D006142 ORTHO05D016090 6.3e-13 80.9 137 35.0
BcaC01g01856 Brassica carinata HOM05D006142 ORTHO05D020039 8.2e-13 80.5 310 25.5
A01p19460 Brassica napus HOM05D000017 ORTHO05D000013 8.2e-13 80.5 83 45.8
C06p09180 Brassica napus HOM05D006142 ORTHO05D010451 2.4e-12 79.0 117 39.3
BolC3t20080H Brassica oleracea HOM05D000005 ORTHO05D000449 4.1e-12 78.2 84 45.2
BraA09t37555Z Brassica rapa HOM05D006142 ORTHO05D028221 4.1e-12 78.2 236 26.3
C05p60180 Brassica napus HOM05D006142 ORTHO05D010451 7.0e-12 77.4 133 37.6
BraA07t31230Z Brassica rapa HOM05D000017 ORTHO05D000013 7.0e-12 77.4 83 47.0
BolC2t10216H Brassica oleracea HOM05D006142 ORTHO05D010451 9.1e-12 77.0 75 48.0
BolC8t48426H Brassica oleracea HOM05D006142 ORTHO05D000013 2.7e-11 75.5 83 42.2
Sp6g08180 Schrenkiella parvula HOM05D032458 ORTHO05D371362 2.7e-11 75.5 54 70.4
Sp6g35200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.7e-11 75.5 88 48.9
A02p27070 Brassica napus HOM05D000017 ORTHO05D000013 7.7e-11 73.9 83 45.8
BolC7t42721H Brassica oleracea HOM05D006142 ORTHO05D010451 1.3e-10 73.2 53 58.5
BraA07t29488Z Brassica rapa HOM05D006142 ORTHO05D010451 1.3e-10 73.2 53 58.5
BcaB01g01313 Brassica carinata HOM05D006142 ORTHO05D010451 1.7e-10 72.8 75 44.0
BcaC05g29081 Brassica carinata HOM05D006142 ORTHO05D010451 2.2e-10 72.4 72 45.8
C04p39380 Brassica napus HOM05D006142 ORTHO05D041830 2.2e-10 72.4 64 54.7
BolC4t25505H Brassica oleracea HOM05D006142 ORTHO05D041830 2.2e-10 72.4 64 54.7
SpUn0016_0180 Schrenkiella parvula HOM05D017415 ORTHO05D014887 8.5e-10 70.5 62 64.5
BcaNung03606 Brassica carinata HOM05D006142 ORTHO05D024119 1.1e-09 70.1 149 32.9
C05p16980 Brassica napus HOM05D006142 ORTHO05D000013 1.1e-09 70.1 57 54.4
Sp7g10450 Schrenkiella parvula HOM05D006837 ORTHO05D371184 1.9e-09 69.3 90 44.4
C04p36540 Brassica napus HOM05D006142 ORTHO05D000013 4.2e-09 68.2 76 46.1
BolC9t57105H Brassica oleracea HOM05D008468 ORTHO05D012332 1.2e-08 66.6 90 36.7
C03p71310 Brassica napus HOM05D006142 ORTHO05D010451 1.6e-08 66.2 65 46.2
BolC6t35503H Brassica oleracea HOM05D006142 ORTHO05D000013 1.6e-08 66.2 76 44.7
BcaC02g12101 Brassica carinata HOM05D006142 ORTHO05D010451 2.1e-08 65.9 43 65.1
BraA08t32812Z Brassica rapa HOM05D000017 ORTHO05D000013 2.1e-08 65.9 56 53.6
BraA07t28119Z Brassica rapa HOM05D000017 ORTHO05D000013 3.6e-08 65.1 69 47.8
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 4.7e-08 64.7 80 48.8
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 4.7e-08 64.7 80 48.8
Sp1g29790 Schrenkiella parvula HOM05D006837 ORTHO05D371236 6.1e-08 64.3 50 66.0
BolC2t12305H Brassica oleracea HOM05D006142 ORTHO05D000013 8.0e-08 63.9 76 44.7
BcaB05g22796 Brassica carinata HOM05D006142 ORTHO05D010451 1.0e-07 63.5 54 53.7
BraA08t32811Z Brassica rapa HOM05D006142 ORTHO05D027476 1.0e-07 63.5 217 28.6
BcaB07g33111 Brassica carinata HOM05D006142 ORTHO05D010451 1.4e-07 63.2 94 39.4
C01p38790 Brassica napus HOM05D008468 ORTHO05D012332 1.4e-07 63.2 90 34.4
C04p43580 Brassica napus HOM05D006142 ORTHO05D000013 1.4e-07 63.2 76 43.4
BolC1t03836H Brassica oleracea HOM05D008468 ORTHO05D012332 1.4e-07 63.2 90 34.4
Sp7g19450 Schrenkiella parvula HOM05D011300 ORTHO05D372562 1.4e-07 63.2 63 49.2
C01p14810 Brassica napus HOM05D006142 ORTHO05D000013 1.8e-07 62.8 76 43.4
BolC6t36270H Brassica oleracea HOM05D006142 ORTHO05D024119 5.2e-07 61.2 220 27.3
BolC3t14875H Brassica oleracea HOM05D000017 ORTHO05D000013 6.8e-07 60.8 82 42.7
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 8.8e-07 60.5 80 45.0
BcaB08g36277 Brassica carinata HOM05D006142 ORTHO05D010451 2.0e-06 59.3 43 65.1
Sp7g06980 Schrenkiella parvula HOM05D008042 ORTHO05D372618 2.0e-06 59.3 175 31.4
Sp5g19080 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.6e-06 58.9 117 33.3
CANSAT35G1652 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-06 58.5 91 36.3
CSS0035302 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 4.4e-06 58.2 74 41.9
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 58.2 80 40.0
CANSAT25G2979 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 58.2 80 40.0
CANSAT35G1787 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 58.2 80 40.0
CANSAT78G2080 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 58.2 80 40.0
CSS0042628 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 5.7e-06 57.8 74 41.9
CANSAT11G0248 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 57.8 80 40.0
CSS0007060 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 9.8e-06 57.0 74 41.9


User provided reference genes

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