Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g08090 Schrenkiella parvula HOM05D006142 ORTHO05D000013 8.1e-63 243.4 112 100.0
Sp7g09080 Schrenkiella parvula HOM05D006142 ORTHO05D371143 2.1e-26 122.5 98 60.2
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 1.3e-23 113.2 106 48.1
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 1.4e-22 109.8 106 47.2
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 2.4e-22 109.0 106 48.1
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 3.1e-22 108.6 106 50.0
BolC2t09931H Brassica oleracea HOM05D000017 ORTHO05D000013 3.5e-21 105.1 106 46.2
C04p39100 Brassica napus HOM05D000017 ORTHO05D000013 5.9e-21 104.4 106 47.2
C03p72500 Brassica napus HOM05D000017 ORTHO05D000013 8.5e-20 100.5 110 43.6
Sp2g08200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.7e-18 94.7 57 75.4
A02p36610 Brassica napus HOM05D000017 ORTHO05D000013 6.1e-18 94.4 107 45.8
BraA02t08656Z Brassica rapa HOM05D000017 ORTHO05D000013 6.1e-18 94.4 107 45.8
Sp1g33280 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.0e-17 93.6 65 67.7
BraA07t31230Z Brassica rapa HOM05D000017 ORTHO05D000013 2.3e-17 92.4 107 44.9
BolC8t48426H Brassica oleracea HOM05D006142 ORTHO05D000013 4.0e-17 91.7 104 41.3
A01p19460 Brassica napus HOM05D000017 ORTHO05D000013 5.2e-17 91.3 107 44.9
C06p36610 Brassica napus HOM05D000017 ORTHO05D000013 5.2e-17 91.3 107 44.9
A02p27070 Brassica napus HOM05D000017 ORTHO05D000013 8.8e-17 90.5 107 43.0
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 3.7e-15 85.1 106 41.5
BraA05t21217Z Brassica rapa HOM05D000017 ORTHO05D000013 1.1e-14 83.6 66 48.5
BraA08t32812Z Brassica rapa HOM05D000017 ORTHO05D000013 2.7e-13 79.0 62 51.6
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.5e-13 78.6 65 60.0
Sp3g28050 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.5e-13 78.6 43 86.0
BraA07t28119Z Brassica rapa HOM05D000017 ORTHO05D000013 5.0e-12 74.7 92 43.5
BolC6t35503H Brassica oleracea HOM05D006142 ORTHO05D000013 2.5e-11 72.4 89 42.7
C04p36540 Brassica napus HOM05D006142 ORTHO05D000013 3.2e-11 72.0 89 41.6
BolC4t25142H Brassica oleracea HOM05D000017 ORTHO05D000013 3.2e-11 72.0 60 51.7
C07p04730 Brassica napus HOM05D006142 ORTHO05D020039 4.2e-11 71.6 83 50.6
C04p39380 Brassica napus HOM05D006142 ORTHO05D041830 1.2e-10 70.1 77 46.8
BolC4t25505H Brassica oleracea HOM05D006142 ORTHO05D041830 1.2e-10 70.1 77 46.8
A05p09870 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-10 69.7 64 46.9
BolC2t12305H Brassica oleracea HOM05D006142 ORTHO05D000013 2.1e-10 69.3 89 42.7
A05p25800 Brassica napus HOM05D000017 ORTHO05D000013 2.7e-10 68.9 64 46.9
A09p29980 Brassica napus HOM05D000017 ORTHO05D000013 2.7e-10 68.9 64 46.9
BraA09t38561Z Brassica rapa HOM05D000017 ORTHO05D000013 2.7e-10 68.9 64 46.9
C05p16980 Brassica napus HOM05D006142 ORTHO05D000013 6.1e-10 67.8 70 50.0
C01p14810 Brassica napus HOM05D006142 ORTHO05D000013 8.0e-10 67.4 89 41.6
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 1.4e-09 66.6 61 49.2
C04p43580 Brassica napus HOM05D006142 ORTHO05D000013 3.0e-09 65.5 89 40.4
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-09 65.1 101 32.7
C01p38790 Brassica napus HOM05D008468 ORTHO05D012332 6.8e-09 64.3 96 34.4
BolC1t03836H Brassica oleracea HOM05D008468 ORTHO05D012332 6.8e-09 64.3 96 34.4
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-09 64.3 96 36.5
CANSAT25G2979 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-09 64.3 96 36.5
CANSAT35G1787 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-09 64.3 96 36.5
CANSAT78G2080 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-09 64.3 96 36.5
CANSAT11G0248 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-09 63.9 96 36.5
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 1.2e-08 63.5 61 47.5
C07p01250 Brassica napus HOM05D001498 ORTHO05D019943 1.2e-08 63.5 61 47.5
BolC3t18860H Brassica oleracea HOM05D001498 ORTHO05D019943 1.5e-08 63.2 61 47.5
BolC8t48132H Brassica oleracea HOM05D006142 ORTHO05D020039 1.5e-08 63.2 91 42.9
CANSAT54G0599 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-08 63.2 96 36.5
Sed0000977 Sechium edule HOM05D000017 ORTHO05D000013 1.5e-08 63.2 106 34.9
C06p18060 Brassica napus HOM05D001498 ORTHO05D019943 2.0e-08 62.8 61 47.5
CANSAT01G1536 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-08 62.8 96 35.4
CANSAT11G2350 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-08 62.8 96 35.4
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 2.6e-08 62.4 59 49.2
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 2.6e-08 62.4 61 45.9
CANSAT78G2065 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-08 62.0 103 36.9
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 4.4e-08 61.6 101 33.7
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 4.4e-08 61.6 101 33.7
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 4.4e-08 61.6 107 32.7
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 5.7e-08 61.2 61 45.9
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 5.7e-08 61.2 111 35.1
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 5.7e-08 61.2 111 35.1
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 5.7e-08 61.2 111 37.8
BolC3t14875H Brassica oleracea HOM05D000017 ORTHO05D000013 7.5e-08 60.8 92 40.2
CANSAT25G2758 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-08 60.8 101 31.7
CANSAT56G4317 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-08 60.8 96 34.4
CANSAT35G1558 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-08 60.5 96 35.4
CANSAT25G1752 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-07 58.9 95 33.7
C09p28450 Brassica napus HOM05D001498 ORTHO05D027369 3.7e-07 58.5 61 44.3
CANSAT01G0945 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-07 58.5 98 32.7
CANSAT21G1133 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-07 58.5 95 34.7
CANSAT56G0674 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-07 58.5 98 32.7
C05p37170 Brassica napus HOM05D017180 ORTHO05D000013 4.8e-07 58.2 110 38.2
BolC6t37505H Brassica oleracea HOM05D001498 ORTHO05D019943 4.8e-07 58.2 61 44.3
Atru.chr3.3437 Acer truncatum HOM05D000017 ORTHO05D000013 8.3e-07 57.4 101 31.7
Atru.chr8.859 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-06 57.0 100 32.0
BolC9t57105H Brassica oleracea HOM05D008468 ORTHO05D012332 1.1e-06 57.0 96 32.3
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 57.0 103 34.0
CANSAT35G1652 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 57.0 96 33.3
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 56.6 99 32.3
Sopen08g018780 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 56.6 99 34.3
CANSAT35G0304 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-06 56.2 103 34.0
Oeu041029.1 Olea europaea HOM05D000017 ORTHO05D000013 1.8e-06 56.2 99 34.3
CANSAT80G0028 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-06 55.8 99 31.3
CANSAT21G0526 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-06 55.5 103 35.0
Sopen05g009000 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-06 55.5 99 33.3
Oeu009175.1 Olea europaea HOM05D000017 ORTHO05D000013 4.1e-06 55.1 106 34.9
CANSAT80G2064 Cannabis sativa HOM05D000017 ORTHO05D000013 5.4e-06 54.7 102 30.4
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-06 54.7 99 32.3
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-06 54.7 99 32.3
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-06 54.7 99 32.3
A01p20700 Brassica napus HOM05D000017 ORTHO05D000013 7.0e-06 54.3 66 42.4
A09p17270 Brassica napus HOM05D000017 ORTHO05D000013 7.0e-06 54.3 66 42.4
C01p26860 Brassica napus HOM05D000017 ORTHO05D000013 7.0e-06 54.3 97 30.9
Oeu019780.1 Olea europaea HOM05D000017 ORTHO05D000013 7.0e-06 54.3 99 33.3
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.0e-06 54.3 68 42.6
TWI77G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.0e-06 54.3 68 42.6
A06p16010 Brassica napus HOM05D000017 ORTHO05D000013 9.1e-06 53.9 110 32.7
C06p23320 Brassica napus HOM05D001498 ORTHO05D019943 9.1e-06 53.9 54 46.3
TWI77G0635 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.1e-06 53.9 68 42.6


User provided reference genes

Program Settings