Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g07750 Schrenkiella parvula HOM05D017415 ORTHO05D014887 4.5e-242 840.9 440 100.0
Sp7g03830 Schrenkiella parvula HOM05D017415 ORTHO05D014887 1.3e-119 434.1 436 60.3
Sp7g05290 Schrenkiella parvula HOM05D011300 ORTHO05D014887 6.5e-39 166.0 455 33.6
Sp7g04460 Schrenkiella parvula HOM05D017415 ORTHO05D014887 3.7e-34 150.2 438 34.5
SpUn0016_0180 Schrenkiella parvula HOM05D017415 ORTHO05D014887 2.1e-29 134.4 531 28.8
BcaB03g13495 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-24 116.3 510 30.6
BcaB04g20795 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-23 115.2 501 28.5
Sp3g27490 Schrenkiella parvula HOM05D000496 ORTHO05D014887 1.3e-23 115.2 189 39.7
BcaB05g23101 Brassica carinata HOM05D012785 ORTHO05D014887 9.4e-22 109.0 481 29.3
BcaC05g28148 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-20 102.4 324 30.2
BcaB08g36546 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-19 101.3 495 28.9
Carub.0024s0015 Capsella rubella HOM05D000496 ORTHO05D000411 4.4e-19 100.1 354 29.4
BcaC04g19063 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-18 96.3 293 31.4
BcaB03g15751 Brassica carinata HOM05D000496 ORTHO05D023995 7.7e-16 89.4 497 26.2
Carub.0008s1966 Capsella rubella HOM05D000496 ORTHO05D000411 6.5e-15 86.3 109 46.8
Sp3g26390 Schrenkiella parvula HOM05D011300 ORTHO05D014887 6.5e-15 86.3 304 28.9
C06p42380 Brassica napus HOM05D011400 ORTHO05D014089 3.2e-14 84.0 116 43.1
Sp4g07770 Schrenkiella parvula HOM05D011300 ORTHO05D000563 3.2e-14 84.0 329 29.5
BcaB04g17809 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 82.0 535 24.5
CARHR285080 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.2e-13 82.0 88 46.6
BraA01t02440Z Brassica rapa HOM05D010593 ORTHO05D016054 2.7e-13 80.9 194 33.5
BcaC03g17123 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-13 80.5 89 47.2
BcaC07g38360 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-13 79.7 184 29.9
A09p42890 Brassica napus HOM05D008340 ORTHO05D000411 1.0e-12 79.0 146 32.2
BcaC03g15356 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-12 78.2 69 52.2
CARHR125790 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.8e-12 78.2 158 38.0
BraA01t02423Z Brassica rapa HOM05D008340 ORTHO05D014933 2.3e-12 77.8 262 27.9
BcaC01g03819 Brassica carinata HOM05D000496 ORTHO05D039116 3.0e-12 77.4 90 40.0
BcaC02g10576 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-12 77.4 88 38.6
C02p52200 Brassica napus HOM05D011400 ORTHO05D014089 8.8e-12 75.9 116 40.5
CARHR118460 Cardamine hirsuta HOM05D000496 ORTHO05D000411 8.8e-12 75.9 72 50.0
BcaC09g49534 Brassica carinata HOM05D008340 ORTHO05D014933 1.2e-11 75.5 292 29.5
A09p42770 Brassica napus HOM05D008340 ORTHO05D027787 1.2e-11 75.5 179 30.7
BcaB05g22528 Brassica carinata HOM05D000106 ORTHO05D000160 2.0e-11 74.7 91 39.6
BcaC02g09839 Brassica carinata HOM05D008340 ORTHO05D027352 2.6e-11 74.3 82 37.8
BolC1t01737H Brassica oleracea HOM05D008340 ORTHO05D000411 2.6e-11 74.3 152 34.2
BcaC07g36881 Brassica carinata HOM05D000496 ORTHO05D027762 1.3e-10 72.0 203 29.6
BcaNung03207 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-10 71.6 153 32.7
Sp6g09260 Schrenkiella parvula HOM05D017415 ORTHO05D014887 1.7e-10 71.6 54 68.5
BcaC09g48062 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-10 71.2 336 25.6
CARHR218360 Cardamine hirsuta HOM05D000496 ORTHO05D000411 2.2e-10 71.2 141 31.9
BcaB07g33775 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-10 70.9 161 31.7
BcaC01g02493 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-10 70.9 163 30.7
BolC6t37230H Brassica oleracea HOM05D008340 ORTHO05D027511 2.8e-10 70.9 60 48.3
Sp6g10050 Schrenkiella parvula HOM05D011300 ORTHO05D014887 2.8e-10 70.9 122 39.3
BolC5t30446H Brassica oleracea HOM05D011400 ORTHO05D014089 3.7e-10 70.5 80 40.0
BolC8t46983H Brassica oleracea HOM05D000496 ORTHO05D000411 3.7e-10 70.5 81 38.3
BraA03t15653Z Brassica rapa HOM05D010593 ORTHO05D016054 3.7e-10 70.5 186 32.3
BcaNung06884 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-10 69.7 173 30.6
BcaC04g22969 Brassica carinata HOM05D008340 ORTHO05D027511 5.4e-09 66.6 65 44.6
BcaC09g50139 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-09 66.2 95 35.8
A01p26760 Brassica napus HOM05D000496 ORTHO05D000411 7.0e-09 66.2 295 27.5
C08p01840 Brassica napus HOM05D000496 ORTHO05D000411 9.1e-09 65.9 277 23.8
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 65.5 83 41.0
BcaC03g15008 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 65.5 247 26.3
BcaC01g02555 Brassica carinata HOM05D008340 ORTHO05D000411 1.6e-08 65.1 200 29.5
BcaB01g01758 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-08 64.7 324 25.3
Thhalv10012224m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.5e-08 63.5 112 30.4
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-08 63.2 409 24.7
BcaC05g25643 Brassica carinata HOM05D012785 ORTHO05D020122 5.9e-08 63.2 390 23.1
Sp6g05340 Schrenkiella parvula HOM05D011300 ORTHO05D014887 1.0e-07 62.4 400 24.0
QL93p0053_0060 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-07 62.0 79 35.4
BcaC07g37144 Brassica carinata HOM05D000496 ORTHO05D012985 1.7e-07 61.6 162 30.2
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 2.2e-07 61.2 72 43.1
BcaC06g36307 Brassica carinata HOM05D008340 ORTHO05D000411 2.2e-07 61.2 101 36.6
BcaC02g10540 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-07 60.5 75 33.3
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-07 60.5 158 34.2
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 3.8e-07 60.5 79 38.0
Carub.0004s2922 Capsella rubella HOM05D000496 ORTHO05D000411 3.8e-07 60.5 283 26.9
Thhalv10009587m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.8e-07 60.5 81 37.0
Ah.07g199660 Amaranthus hybridus HOM05D000003 ORTHO05D000126 5.0e-07 60.1 89 33.7
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-07 60.1 183 29.0
BcaC06g33280 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-07 60.1 75 32.0
BolC5t31742H Brassica oleracea HOM05D010593 ORTHO05D033440 5.0e-07 60.1 385 25.2
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-07 59.7 90 35.6
BcaC05g27679 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-07 59.7 69 37.7
BcaC09g50123 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-07 59.7 79 36.7
C03p64190 Brassica napus HOM05D008340 ORTHO05D000411 6.5e-07 59.7 140 30.0
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 6.5e-07 59.7 167 29.3
BolC1t02804H Brassica oleracea HOM05D000496 ORTHO05D000411 6.5e-07 59.7 79 36.7
AT1G43145 Arabidopsis thaliana HOM05D017415 ORTHO05D014887 8.5e-07 59.3 168 36.9
BcaB06g26487 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-07 59.3 173 27.7
BcaC01g02202 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-07 59.3 83 36.1
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-07 59.3 181 28.7
BcaC08g47082 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-07 59.3 423 26.2
C06p28390 Brassica napus HOM05D000496 ORTHO05D000411 8.5e-07 59.3 75 40.0
BolC9t57397H Brassica oleracea HOM05D009214 ORTHO05D013521 1.1e-06 58.9 69 40.6
BcaB08g35130 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 58.5 70 34.3
C05p04150 Brassica napus HOM05D000496 ORTHO05D000411 1.5e-06 58.5 75 40.0
BolC1t03875H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-06 58.5 75 33.3
BolC5t34388H Brassica oleracea HOM05D009214 ORTHO05D000411 1.5e-06 58.5 202 28.2
BolC8t47996H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-06 58.5 83 33.7
Ah.07g199530 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.9e-06 58.2 129 28.7
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 58.2 160 30.6
BcaB06g29541 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 58.2 83 36.1
BcaC05g27615 Brassica carinata HOM05D000496 ORTHO05D032758 1.9e-06 58.2 74 35.1
C05p36020 Brassica napus HOM05D000496 ORTHO05D000411 1.9e-06 58.2 74 35.1
BolC5t34093H Brassica oleracea HOM05D010185 ORTHO05D000411 1.9e-06 58.2 83 37.3
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 57.8 71 39.4
BcaC09g49376 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 57.8 75 33.3
BolC8t49529H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-06 57.8 69 39.1
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 2.5e-06 57.8 88 35.2
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 2.5e-06 57.8 88 35.2
Sp3g28710 Schrenkiella parvula HOM05D011300 ORTHO05D011005 2.5e-06 57.8 389 27.0
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 57.4 128 29.7
BcaC01g00784 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 57.4 94 30.9
BcaC01g01997 Brassica carinata HOM05D000496 ORTHO05D027787 3.2e-06 57.4 220 26.4
BcaC01g03406 Brassica carinata HOM05D008340 ORTHO05D014933 3.2e-06 57.4 327 24.5
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 3.2e-06 57.4 71 35.2
C01p28770 Brassica napus HOM05D000496 ORTHO05D000411 3.2e-06 57.4 79 35.4
C02p52220 Brassica napus HOM05D009214 ORTHO05D013521 3.2e-06 57.4 124 30.6
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 3.2e-06 57.4 74 40.5
BcaC02g09505 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-06 57.0 74 36.5
BcaC02g10483 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-06 57.0 152 28.9
BcaC03g15470 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-06 57.0 338 23.4
BolC9t57656H Brassica oleracea HOM05D000496 ORTHO05D000411 4.2e-06 57.0 69 36.2
Sp3g27170 Schrenkiella parvula HOM05D011300 ORTHO05D371098 4.2e-06 57.0 172 31.4
C06p05580 Brassica napus HOM05D009214 ORTHO05D013521 5.5e-06 56.6 172 30.8
Sp6g09000 Schrenkiella parvula HOM05D011300 ORTHO05D014887 5.5e-06 56.6 285 23.5
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 7.2e-06 56.2 62 37.1
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 7.2e-06 56.2 137 31.4
BcaB04g20334 Brassica carinata HOM05D000013 ORTHO05D000011 9.4e-06 55.8 86 34.9
BcaB06g26492 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-06 55.8 158 28.5
BcaB07g33233 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-06 55.8 182 29.1
BcaC03g14874 Brassica carinata HOM05D000496 ORTHO05D018575 9.4e-06 55.8 480 22.5
A02p15120 Brassica napus HOM05D009214 ORTHO05D013521 9.4e-06 55.8 152 27.6
A09p33230 Brassica napus HOM05D000496 ORTHO05D000411 9.4e-06 55.8 174 27.0
C01p31180 Brassica napus HOM05D008340 ORTHO05D000411 9.4e-06 55.8 419 22.9
C01p43360 Brassica napus HOM05D000496 ORTHO05D000411 9.4e-06 55.8 89 30.3
BolC9t59648H Brassica oleracea HOM05D000759 ORTHO05D000574 9.4e-06 55.8 69 40.6
BraA09t38866Z Brassica rapa HOM05D000496 ORTHO05D000411 9.4e-06 55.8 174 27.0


User provided reference genes

Program Settings