Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g07740 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.5e-109 399.4 189 100.0
Thhalv10009844m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 1.0e-33 147.5 154 49.4
BraA02t08446Z Brassica rapa HOM05D001350 ORTHO05D001091 2.5e-32 142.9 135 53.3
Sp7g26700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.5e-32 142.9 148 48.0
Sp7g09760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-30 137.5 155 44.5
BolC2t10697H Brassica oleracea HOM05D001350 ORTHO05D001091 4.0e-30 135.6 136 53.7
BolC5t29613H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-27 127.5 139 50.4
BolC9t57914H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-27 127.5 137 49.6
Sp4g06170 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-27 127.5 107 60.7
Sp3g29630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.5e-24 116.3 126 47.6
Sp6g07800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.1e-22 109.4 126 42.9
Sp7g06400 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.1e-22 109.4 114 43.9
Thhalv10019496m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 4.0e-22 109.0 141 41.8
Sp3g23930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.0e-22 109.0 128 45.3
Thhalv10017817m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 6.9e-22 108.2 128 46.9
BraA03t14403Z Brassica rapa HOM05D001350 ORTHO05D001091 2.0e-21 106.7 109 50.5
Sp7g10230 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.4e-21 105.9 96 53.1
Sp7g10630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.6e-21 104.8 132 43.9
Sp3g31760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-20 104.0 115 43.5
SpUn0030_0070 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-20 104.0 115 43.5
BolC2t08137H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-20 103.2 87 54.0
Sp7g07530 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-19 100.9 92 54.3
BolC4t24823H Brassica oleracea HOM05D001350 ORTHO05D001091 1.4e-19 100.5 155 36.8
Sp4g09450 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.5e-19 98.6 155 39.4
BcaC09g51820 Brassica carinata HOM05D001350 ORTHO05D001091 9.3e-19 97.8 152 36.8
C05p17500 Brassica napus HOM05D001350 ORTHO05D001091 1.2e-18 97.4 161 37.9
Sp7g05470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.7e-18 96.3 112 40.2
Sp6g09390 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.6e-18 95.5 93 49.5
BcaC08g42980 Brassica carinata HOM05D001350 ORTHO05D001091 6.0e-18 95.1 150 36.7
Sp5g17770 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-17 94.0 98 48.0
BcaB03g16680 Brassica carinata HOM05D001350 ORTHO05D001091 2.3e-17 93.2 174 35.6
Sp3g26380 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.0e-17 92.8 147 37.4
Sp7g03320 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.9e-17 92.4 84 52.4
BolC2t08930H Brassica oleracea HOM05D000048 ORTHO05D000207 5.1e-17 92.0 154 34.4
BolC1t04094H Brassica oleracea HOM05D001350 ORTHO05D001091 6.7e-17 91.7 154 37.0
BcaB01g01759 Brassica carinata HOM05D001350 ORTHO05D001091 2.5e-16 89.7 153 37.3
BcaC07g39692 Brassica carinata HOM05D000003 ORTHO05D001091 3.3e-16 89.4 178 35.4
BolC3t19138H Brassica oleracea HOM05D001350 ORTHO05D001091 3.3e-16 89.4 161 36.0
Sp6g10060 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.6e-16 88.6 111 44.1
Sp7g08450 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.4e-16 88.2 88 50.0
BcaB01g02463 Brassica carinata HOM05D001350 ORTHO05D001091 1.3e-15 87.4 152 34.9
BcaC07g37262 Brassica carinata HOM05D001350 ORTHO05D001091 6.2e-15 85.1 162 35.2
BcaC07g42294 Brassica carinata HOM05D001350 ORTHO05D001091 6.2e-15 85.1 154 32.5
BolC8t47716H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-14 84.3 151 34.4
Sp3g21330 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-14 84.3 151 37.1
Sp3g29680 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-14 84.3 92 42.4
BcaB05g24532 Brassica carinata HOM05D000003 ORTHO05D001091 1.4e-14 84.0 155 34.8
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-13 79.7 153 34.6
BolC7t42007H Brassica oleracea HOM05D001350 ORTHO05D001091 3.4e-13 79.3 67 55.2
BcaC07g37777 Brassica carinata HOM05D001350 ORTHO05D001091 4.5e-13 79.0 124 34.7
Sp7g10930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.5e-13 79.0 93 44.1
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-13 78.2 157 32.5
BcaB08g34689 Brassica carinata HOM05D001350 ORTHO05D001091 2.2e-12 76.6 95 41.1
BolC2t07867H Brassica oleracea HOM05D001350 ORTHO05D001091 3.8e-12 75.9 152 33.6
BraA05t21420Z Brassica rapa HOM05D001350 ORTHO05D001091 4.9e-12 75.5 164 31.1
BolC7t40726H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-11 74.3 67 53.7
Sp1g31130 Schrenkiella parvula HOM05D017415 ORTHO05D001091 1.1e-11 74.3 145 33.1
BcaC09g49092 Brassica carinata HOM05D001350 ORTHO05D001091 1.9e-11 73.6 90 43.3
Sp5g17980 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-11 73.6 90 42.2
Aa31LG7G12310 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-11 73.2 155 34.8
BolC7t43625H Brassica oleracea HOM05D001350 ORTHO05D001091 3.2e-11 72.8 133 33.8
BcaB04g17307 Brassica carinata HOM05D001350 ORTHO05D001091 4.2e-11 72.4 91 41.8
BolC1t03684H Brassica oleracea HOM05D001350 ORTHO05D001091 4.2e-11 72.4 90 38.9
BcaB08g36771 Brassica carinata HOM05D001350 ORTHO05D001091 7.1e-11 71.6 114 37.7
CARHR102280 Cardamine hirsuta HOM05D001350 ORTHO05D001091 7.1e-11 71.6 91 38.5
BolC6t36434H Brassica oleracea HOM05D001350 ORTHO05D001091 9.3e-11 71.2 67 49.3
BcaB03g16442 Brassica carinata HOM05D001350 ORTHO05D001091 1.2e-10 70.9 114 37.7
BolC2t10633H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-10 70.9 91 40.7
BolC5t33249H Brassica oleracea HOM05D001350 ORTHO05D011193 1.2e-10 70.9 90 40.0
BcaC02g09840 Brassica carinata HOM05D001350 ORTHO05D001091 1.6e-10 70.5 156 29.5
BraA03t13711Z Brassica rapa HOM05D001350 ORTHO05D001091 1.6e-10 70.5 153 29.4
BraA03t14268Z Brassica rapa HOM05D001350 ORTHO05D001091 1.6e-10 70.5 152 32.2
Aa31sc85G50 Aethionema arabicum HOM05D000003 ORTHO05D001091 2.7e-10 69.7 155 29.0
BolC2t08480H Brassica oleracea HOM05D001350 ORTHO05D001091 2.7e-10 69.7 152 30.9
BolC8t48745H Brassica oleracea HOM05D001350 ORTHO05D001091 2.7e-10 69.7 134 32.8
Aa31LG8G11190 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-10 69.3 151 31.1
C04p20800 Brassica napus HOM05D001350 ORTHO05D001091 3.5e-10 69.3 150 29.3
BcaC01g02077 Brassica carinata HOM05D001350 ORTHO05D001091 4.6e-10 68.9 90 40.0
BraA05t19427Z Brassica rapa HOM05D001350 ORTHO05D001091 4.6e-10 68.9 87 40.2
C09p50940 Brassica napus HOM05D001350 ORTHO05D001091 7.9e-10 68.2 90 37.8
BolC5t33811H Brassica oleracea HOM05D001350 ORTHO05D001091 7.9e-10 68.2 90 40.0
BolC5t28823H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-09 67.4 61 54.1
BraA02t07544Z Brassica rapa HOM05D001350 ORTHO05D001091 1.3e-09 67.4 90 38.9
BraSC37t46148Z Brassica rapa HOM05D001350 ORTHO05D001091 1.8e-09 67.0 61 50.8
A10p19370 Brassica napus HOM05D003960 ORTHO05D004297 2.3e-09 66.6 59 49.2
BolC3t21127H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-09 66.6 117 37.6
CARHR180870 Cardamine hirsuta HOM05D001350 ORTHO05D001091 2.3e-09 66.6 99 37.4
Sp7g04130 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.0e-09 66.2 55 50.9
BcaC03g15006 Brassica carinata HOM05D000003 ORTHO05D001091 3.9e-09 65.9 139 33.8
BcaC03g16655 Brassica carinata HOM05D001350 ORTHO05D001091 3.9e-09 65.9 92 34.8
CARHR049200 Cardamine hirsuta HOM05D001350 ORTHO05D001091 3.9e-09 65.9 93 39.8
BcaC04g23025 Brassica carinata HOM05D001350 ORTHO05D001091 5.1e-09 65.5 90 38.9
Sp2g01850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.1e-09 65.5 45 62.2
BolC5t32119H Brassica oleracea HOM05D001350 ORTHO05D001091 6.7e-09 65.1 153 30.7
Sp2g06040 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-08 64.3 90 37.8
BolC8t48512H Brassica oleracea HOM05D000003 ORTHO05D001091 1.5e-08 63.9 140 32.9
BolC8t50384H Brassica oleracea HOM05D000003 ORTHO05D001091 1.5e-08 63.9 156 30.8
BcaC03g14873 Brassica carinata HOM05D001350 ORTHO05D001091 1.9e-08 63.5 78 39.7
BolC2t09152H Brassica oleracea HOM05D001350 ORTHO05D001091 2.5e-08 63.2 78 42.3
BolC8t48012H Brassica oleracea HOM05D001350 ORTHO05D001091 3.3e-08 62.8 45 60.0
BolC9t56667H Brassica oleracea HOM05D001350 ORTHO05D001091 3.3e-08 62.8 76 42.1
BraA08t32587Z Brassica rapa HOM05D001350 ORTHO05D001091 4.3e-08 62.4 76 39.5
BcaB08g35872 Brassica carinata HOM05D001350 ORTHO05D001091 5.7e-08 62.0 80 42.5
BcaB02g09955 Brassica carinata HOM05D001350 ORTHO05D001091 7.4e-08 61.6 84 38.1
Sp7g08950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.4e-08 61.6 61 45.9
BcaC08g43561 Brassica carinata HOM05D001350 ORTHO05D001091 9.7e-08 61.2 90 36.7
Sp2g22320 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.7e-08 61.2 39 76.9
BcaC04g23246 Brassica carinata HOM05D000003 ORTHO05D001091 1.3e-07 60.8 113 33.6
Sp3g24950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-07 60.8 49 51.0
BcaC03g16301 Brassica carinata HOM05D001350 ORTHO05D001091 1.6e-07 60.5 134 29.9
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-07 59.7 189 27.5
BolC2t11167H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-07 59.7 96 39.6
BraA01t03311Z Brassica rapa HOM05D001350 ORTHO05D001091 2.8e-07 59.7 104 32.7
Sp4g06470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.7e-07 59.3 45 60.0
Sp4g11850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.7e-07 59.3 61 42.6
BolC5t30455H Brassica oleracea HOM05D001350 ORTHO05D001091 4.8e-07 58.9 58 51.7
BolC9t53650H Brassica oleracea HOM05D000003 ORTHO05D001091 4.8e-07 58.9 130 30.8
BcaC04g21635 Brassica carinata HOM05D000003 ORTHO05D001498 6.3e-07 58.5 154 28.6
BcaC06g34616 Brassica carinata HOM05D001350 ORTHO05D001091 6.3e-07 58.5 122 33.6
BolC8t48033H Brassica oleracea HOM05D001350 ORTHO05D001091 8.2e-07 58.2 72 38.9
Sp1g29090 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.1e-06 57.8 70 38.6
Sp7g05290 Schrenkiella parvula HOM05D011300 ORTHO05D014887 1.1e-06 57.8 48 52.1
BolC7t42715H Brassica oleracea HOM05D001350 ORTHO05D011193 1.4e-06 57.4 61 42.6
Sp7g05880 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-06 57.0 49 46.9
BraA03t10627Z Brassica rapa HOM05D001350 ORTHO05D001091 2.4e-06 56.6 88 34.1
Sp4g09280 Schrenkiella parvula HOM05D006786 ORTHO05D008901 2.4e-06 56.6 80 41.2
BolC2t06976H Brassica oleracea HOM05D001350 ORTHO05D001091 3.1e-06 56.2 74 40.5
Thhalv10023166m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.1e-06 56.2 76 39.5
SpUn0002_0700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.1e-06 56.2 55 49.1
Aa31LG11G4970 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 156 26.9
BolC1t02449H Brassica oleracea HOM05D001350 ORTHO05D001091 4.1e-06 55.8 45 51.1
Aa31LG2G18970 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.3e-06 55.5 157 30.6
BcaC01g00384 Brassica carinata HOM05D001350 ORTHO05D001091 5.3e-06 55.5 81 35.8
BraA01t02271Z Brassica rapa HOM05D001350 ORTHO05D001091 5.3e-06 55.5 70 41.4
Sp3g28720 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.3e-06 55.5 45 51.1
BolC2t09224H Brassica oleracea HOM05D001350 ORTHO05D001091 6.9e-06 55.1 61 44.3
BolC4t24258H Brassica oleracea HOM05D001350 ORTHO05D001091 6.9e-06 55.1 92 33.7
Thhalv10028742m.g Eutrema salsugineum HOM05D007480 ORTHO05D009460 6.9e-06 55.1 43 53.5
Sp6g07660 Schrenkiella parvula HOM05D001350 ORTHO05D001091 6.9e-06 55.1 45 51.1
Aa31LG9G9420 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.0e-06 54.7 147 29.9
BolC1t03055H Brassica oleracea HOM05D065634 ORTHO05D028336 9.0e-06 54.7 89 34.8
BolC3t20333H Brassica oleracea HOM05D001350 ORTHO05D001091 9.0e-06 54.7 61 44.3
BolC7t44101H Brassica oleracea HOM05D001350 ORTHO05D011193 9.0e-06 54.7 61 42.6


User provided reference genes

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