Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g07650 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.4e-47 192.6 96 100.0
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-25 117.9 98 53.1
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 7.1e-23 110.5 93 55.9
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.2e-23 110.2 102 53.9
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.6e-22 109.4 100 52.0
Sp3g31250 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.5e-20 102.8 100 51.0
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 4.9e-16 87.8 96 44.8
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 4.9e-16 87.8 96 44.8
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 6.4e-16 87.4 96 43.8
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 6.4e-16 87.4 96 43.8
Sp3g31220 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.9e-15 85.9 78 50.0
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 1.6e-14 82.8 96 42.7
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 1.6e-14 82.8 96 42.7
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.6e-14 82.8 97 42.3
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.6e-14 81.3 93 44.1
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.3e-13 79.0 93 43.0
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.0e-13 78.6 93 41.9
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.5e-12 75.5 93 39.8
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.6e-12 74.3 93 39.8
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.6e-12 73.6 93 43.0
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 1.2e-11 73.2 96 42.7
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 2.1e-11 72.4 96 41.7
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 4.7e-11 71.2 94 41.5
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.8e-10 69.3 93 41.9
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 3.1e-10 68.6 93 41.9
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.0e-10 68.2 87 37.9
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 6.8e-10 67.4 93 40.9
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 6.8e-10 67.4 92 40.2
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 6.8e-10 67.4 93 38.7
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 6.8e-10 67.4 93 38.7
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 8.9e-10 67.0 93 37.6
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 8.9e-10 67.0 93 37.6
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 8.9e-10 67.0 93 37.6
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 1.2e-09 66.6 92 42.4
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-09 66.2 93 38.7
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-09 66.2 93 36.6
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 1.5e-09 66.2 92 42.4
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 2.0e-09 65.9 93 36.6
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 2.6e-09 65.5 92 39.1
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 39.1
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 38.0
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 38.0
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 38.0
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 38.0
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 38.0
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 41.3
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 41.3
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 41.3
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 41.3
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 3.4e-09 65.1 92 41.3
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-09 64.7 92 39.1
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-09 64.7 92 39.1
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-09 64.7 92 39.1
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 7.6e-09 63.9 92 38.0
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 9.9e-09 63.5 93 37.6
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 1.3e-08 63.2 92 40.2
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 1.7e-08 62.8 92 40.2
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 1.7e-08 62.8 92 40.2
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 2.2e-08 62.4 92 37.0
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 2.2e-08 62.4 92 37.0
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.2e-08 62.4 62 43.5
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 2.9e-08 62.0 92 37.0
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 2.9e-08 62.0 92 37.0
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 2.9e-08 62.0 95 40.0
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 3.8e-08 61.6 93 36.6
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 8.4e-08 60.5 90 36.7
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 1.9e-07 59.3 93 37.6
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 1.9e-07 59.3 95 38.9
BcaC09g49315 Brassica carinata HOM05D007338 ORTHO05D009406 2.4e-07 58.9 92 37.0
Sp2g03760 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.4e-07 58.9 96 36.5
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 3.2e-07 58.5 93 36.6
BcaC09g49317 Brassica carinata HOM05D007338 ORTHO05D009406 3.2e-07 58.5 92 38.0
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 4.2e-07 58.2 93 36.6
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 4.2e-07 58.2 92 38.0
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 4.2e-07 58.2 92 38.0
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 4.2e-07 58.2 92 38.0
BolC1t03760H Brassica oleracea HOM05D007338 ORTHO05D009406 4.6e-06 54.7 51 49.0
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 6.0e-06 54.3 95 33.7


User provided reference genes

Program Settings