Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 3.9e-78 294.7 143 100.0
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 2.4e-67 258.8 144 88.2
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 2.0e-58 229.2 146 81.5
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 3.6e-55 218.4 148 73.6
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 4.7e-55 218.0 145 78.6
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 6.1e-55 217.6 141 79.4
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 6.1e-55 217.6 141 79.4
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 2.0e-53 212.6 142 76.1
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 1.4e-51 206.5 146 75.3
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 2.3e-46 189.1 141 70.2
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 2.3e-46 189.1 141 70.2
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 3.7e-44 181.8 134 70.1
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 4.9e-36 154.8 155 56.8
THA.LOC104808923 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 8.9e-30 134.0 150 52.7
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 8.6e-17 90.9 149 40.3
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 4.3e-16 88.6 131 41.2
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 4.3e-16 88.6 142 42.3
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 5.6e-16 88.2 108 47.2
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.1e-15 86.3 130 42.3
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.6e-15 85.5 131 42.7
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 4.7e-15 85.1 110 47.3
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.7e-15 85.1 133 42.9
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.4e-14 83.6 131 39.7
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 8.9e-14 80.9 134 44.0
Gohir.D05G012200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.2e-13 80.5 145 40.0
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.5e-13 80.1 141 39.7
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 5.8e-13 78.2 146 37.0
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 7.5e-13 77.8 95 46.3
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 7.5e-13 77.8 138 34.1
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.3e-12 77.0 144 36.1
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.3e-12 77.0 144 36.1
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 2.9e-12 75.9 151 37.1
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 3.7e-12 75.5 140 40.7
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 3.7e-12 75.5 144 38.9
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.9e-12 75.1 131 37.4
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.9e-12 75.1 131 37.4
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 6.4e-12 74.7 130 41.5
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.1e-11 73.9 131 38.9
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.1e-11 73.9 146 35.6
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.1e-11 73.9 146 37.0
Gohir.A05G011500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.1e-11 73.9 145 37.2
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.4e-11 73.6 134 44.8
Gorai.009G012500 Gossypium raimondii HOM05D003969 ORTHO05D003125 1.4e-11 73.6 145 37.9
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 1.4e-11 73.6 134 44.8
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.9e-11 73.2 146 38.4
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.9e-11 73.2 133 39.1
Atru.chr7.265 Acer truncatum HOM05D003969 ORTHO05D003125 3.2e-11 72.4 68 60.3
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.2e-11 72.4 140 37.1
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 3.2e-11 72.4 134 39.6
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 5.4e-11 71.6 149 39.6
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 7.1e-11 71.2 133 38.3
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 7.1e-11 71.2 151 36.4
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.2e-10 70.5 133 40.6
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 1.6e-10 70.1 138 37.7
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 2.1e-10 69.7 134 38.1
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.1e-10 69.7 146 34.9
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 2.1e-10 69.7 132 40.2
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 2.1e-10 69.7 154 35.7
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 2.1e-10 69.7 140 33.6
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 2.7e-10 69.3 133 39.8
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 6.0e-10 68.2 152 37.5
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 7.8e-10 67.8 139 38.8
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 7.8e-10 67.8 137 32.1
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 7.8e-10 67.8 69 49.3
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 1.0e-09 67.4 132 38.6
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.3e-09 67.0 132 37.1
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.3e-09 67.0 132 37.1
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 1.3e-09 67.0 116 42.2
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 1.3e-09 67.0 151 34.4
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 1.7e-09 66.6 144 34.0
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.7e-09 66.6 131 34.4
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 1.7e-09 66.6 132 38.6
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 2.3e-09 66.2 133 37.6
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 2.3e-09 66.2 130 36.9
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 3.0e-09 65.9 131 37.4
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 3.9e-09 65.5 140 32.1
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.1e-09 65.1 130 36.9
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 5.1e-09 65.1 139 35.3
PGR142G4289 Punica granatum HOM05D003969 ORTHO05D003125 5.1e-09 65.1 142 38.0
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 6.6e-09 64.7 134 38.8
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 6.6e-09 64.7 146 34.2
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 8.6e-09 64.3 69 52.2
QL02p091243 Quercus lobata HOM05D003969 ORTHO05D003125 8.6e-09 64.3 154 34.4
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 8.6e-09 64.3 141 34.0
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.1e-08 63.9 142 39.4
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 1.1e-08 63.9 135 38.5
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 1.1e-08 63.9 97 40.2
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.5e-08 63.5 136 35.3
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.5e-08 63.5 81 46.9
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 1.5e-08 63.5 147 32.7
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.5e-08 63.5 140 33.6
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.5e-08 63.5 133 36.1
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 1.9e-08 63.2 116 41.4
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 1.9e-08 63.2 130 36.9
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 1.9e-08 63.2 70 48.6
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 1.9e-08 63.2 77 39.0
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 1.9e-08 63.2 142 35.2
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 2.5e-08 62.8 141 36.9
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.5e-08 62.8 140 35.7
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.5e-08 62.8 127 38.6
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.5e-08 62.8 86 40.7
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.3e-08 62.4 133 35.3
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 3.3e-08 62.4 133 37.6
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 4.3e-08 62.0 130 36.2
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 5.6e-08 61.6 135 35.6
Aqoxy7G00610 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 9.5e-08 60.8 144 34.0
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 9.5e-08 60.8 134 35.8
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 9.5e-08 60.8 134 35.8
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 1.2e-07 60.5 49 57.1
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.2e-07 60.5 133 33.1
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 1.2e-07 60.5 140 33.6
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.2e-07 60.5 134 35.1
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.2e-07 60.5 131 31.3
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 1.6e-07 60.1 148 37.2
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 2.8e-07 59.3 48 52.1
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.8e-07 59.3 81 46.9
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 2.8e-07 59.3 144 36.1
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 3.6e-07 58.9 135 34.1
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.6e-07 58.9 69 44.9
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 4.7e-07 58.5 79 43.0
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 4.7e-07 58.5 138 34.8
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 8.1e-07 57.8 132 34.1
Medtr1g012950 Medicago truncatula HOM05D013068 ORTHO05D003125 8.1e-07 57.8 149 34.2
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.4e-06 57.0 129 34.1
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.8e-06 56.6 83 39.8
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.8e-06 56.6 83 41.0
HPP92_020075 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.8e-06 56.6 108 37.0
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 2.4e-06 56.2 48 52.1
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.4e-06 56.2 128 32.8
Eucgr.C01698 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.1e-06 55.8 85 43.5
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 4.0e-06 55.5 77 44.2
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 4.0e-06 55.5 47 51.1
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.0e-06 55.5 130 33.8
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 4.0e-06 55.5 148 33.1
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.2e-06 55.1 73 42.5
PSO384G4887 Papaver somniferum HOM05D000107 ORTHO05D000062 5.2e-06 55.1 47 57.4
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 6.8e-06 54.7 103 39.8
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 8.9e-06 54.3 124 35.5
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 8.9e-06 54.3 132 31.8
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 8.9e-06 54.3 134 32.1


User provided reference genes

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