Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 0.0e+00 1498.0 783 100.0
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1308.1 788 87.4
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1298.1 783 87.1
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1296.2 782 87.3
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 0.0e+00 1292.7 790 86.6
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1273.1 788 86.9
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 0.0e+00 1227.2 792 83.3
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 0.0e+00 1192.2 790 80.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 0.0e+00 1171.0 792 79.7
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 0.0e+00 1135.6 791 77.9
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 9.7e-304 1046.6 783 72.9
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.8e-302 1042.3 784 74.2
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 8.5e-292 1006.9 784 71.4
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.8e-271 937.9 812 63.4
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 1.1e-262 910.2 566 85.3
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 7.3e-259 897.5 725 69.5
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.2e-253 880.2 553 84.8
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.1e-243 847.0 822 58.6
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 6.9e-225 784.6 863 53.1
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 3.8e-223 778.9 854 53.5
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 6.4e-223 778.1 852 52.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.9e-222 776.5 854 53.3
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.6e-221 773.5 857 52.7
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.7e-221 772.7 855 52.9
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 7.8e-221 771.2 856 52.8
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.3e-219 765.8 857 52.4
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 9.6e-219 764.2 827 53.0
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 8.1e-218 761.1 866 51.8
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.6e-216 756.1 860 51.6
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 9.9e-216 754.2 823 52.9
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.2e-215 753.1 857 51.9
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.2e-213 747.3 855 50.9
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.2e-213 747.3 858 50.8
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.3e-212 743.8 828 53.3
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.3e-212 743.8 872 51.1
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.5e-211 740.3 859 49.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 5.6e-211 738.4 861 49.4
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.5e-208 730.3 861 49.2
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 3.4e-208 729.2 854 49.5
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 5.8e-208 728.4 856 50.4
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 2.2e-207 726.5 867 50.6
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 6.4e-207 724.9 829 51.0
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 8.4e-207 724.5 850 50.8
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.1e-206 724.2 862 49.2
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 2.4e-206 723.0 863 48.8
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.2e-205 720.7 856 49.4
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.5e-205 719.2 896 48.0
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 6.0e-205 718.4 863 50.2
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 6.0e-205 718.4 853 49.4
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 3.0e-204 716.1 854 49.8
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 3.0e-204 716.1 854 49.6
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 3.0e-204 716.1 860 50.0
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.9e-204 715.7 835 51.3
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 2.5e-203 713.0 858 50.3
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.6e-202 710.3 853 48.7
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.6e-202 710.3 836 50.6
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 3.1e-201 706.1 861 49.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.8e-200 701.8 851 50.1
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.3e-199 700.7 816 50.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 1.7e-199 700.3 835 50.5
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.9e-198 696.8 858 49.0
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.5e-198 696.4 862 49.1
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 2.5e-198 696.4 869 48.2
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.6e-197 693.7 832 50.2
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.6e-197 693.7 851 47.6
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.8e-196 690.3 831 50.3
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.3e-196 689.9 831 50.2
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.1e-195 687.6 830 50.0
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 2.5e-195 686.4 715 54.1
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.3e-195 686.0 836 50.0
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 4.3e-195 685.6 859 47.5
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 4.3e-195 685.6 1012 44.1
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 2.1e-194 683.3 836 49.4
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 6.3e-194 681.8 854 48.8
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 7.6e-192 674.9 882 47.6
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 4.6e-189 665.6 840 48.1
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 6.1e-189 665.2 820 48.5
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 3.0e-188 662.9 843 47.8
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.6e-186 657.1 859 47.8
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 8.2e-186 654.8 976 43.9
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 1.2e-184 651.0 800 48.1
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 2.9e-183 646.4 842 46.7
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 1.4e-182 644.0 815 47.6
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 4.6e-181 639.0 863 46.7
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 6.1e-181 638.6 815 47.2
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.8e-180 637.1 843 46.4
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 3.0e-180 636.3 856 46.7
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 5.1e-180 635.6 848 45.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 6.7e-180 635.2 862 46.1
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 3.7e-178 629.4 847 44.9
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.1e-177 625.9 774 49.0
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 3.4e-176 622.9 846 45.0
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 5.9e-176 622.1 824 45.3
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 6.5e-175 618.6 851 44.4
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 6.5e-175 618.6 823 45.1
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 1.9e-174 617.1 649 55.0
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 1.9e-174 617.1 851 43.8
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 5.2e-172 609.0 824 45.8
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.1e-171 607.8 825 45.6
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 6.3e-170 602.1 844 44.3
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.2e-168 597.8 985 40.4
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 2.0e-168 597.0 685 49.9
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.8e-167 592.8 902 43.2
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 4.2e-166 589.3 836 42.9
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 8.0e-165 585.1 829 44.5
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 4.0e-164 582.8 852 44.2
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 5.2e-164 582.4 836 44.5
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.8e-164 581.6 855 42.6
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 5.7e-163 578.9 856 44.4
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 6.3e-162 575.5 808 43.9
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 6.3e-162 575.5 857 43.6
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.4e-161 573.5 855 43.0
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.6e-160 570.9 797 43.0
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 2.2e-159 567.0 799 44.1
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.5e-159 565.1 802 43.9
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 3.2e-158 563.1 886 42.6
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 2.1e-157 560.5 800 42.5
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.0e-156 558.1 793 43.1
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.8e-156 557.4 848 44.1
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.3e-156 557.0 860 42.3
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.0e-156 556.6 685 47.9
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 8.3e-154 548.5 815 42.6
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 1.1e-153 548.1 784 43.2
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 8.6e-151 538.5 910 41.0
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 9.5e-150 535.0 637 49.3
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 9.5e-150 535.0 668 49.1
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.1e-149 533.9 639 49.5
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.0e-149 531.9 805 42.9
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.7e-146 524.2 676 49.4
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 8.9e-140 501.9 618 46.9
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-136 491.5 637 45.4
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.2e-131 474.9 801 39.0
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.7e-130 469.9 873 38.3
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 4.6e-128 463.0 808 37.0
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.0e-127 461.8 302 81.8
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 1.3e-127 461.5 631 44.1
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 2.5e-126 457.2 809 36.2
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 4.3e-126 456.4 829 38.5
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 6.2e-125 452.6 586 46.4
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 1.3e-122 444.9 875 36.0
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.8e-116 424.5 853 37.4
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.2e-109 401.7 783 35.8
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.1e-109 401.0 812 35.2
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 6.9e-108 396.0 810 34.9
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.3e-106 391.7 258 82.2
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 4.8e-101 373.2 564 42.7
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.5e-99 368.2 661 39.6
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 3.5e-96 357.1 258 76.0
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.6e-93 348.2 746 36.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 2.0e-83 314.7 440 42.5
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 5.1e-79 300.1 190 81.6
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.6e-77 295.0 421 43.7
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-60 237.7 665 29.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.0e-58 232.6 718 30.4
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-48 199.1 434 37.8
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.4e-38 164.5 190 45.8
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 4.1e-36 157.5 347 35.4
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.9e-35 153.7 120 59.2
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.1e-33 149.4 294 34.7
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.5e-30 139.0 280 36.8
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.0e-30 138.7 170 44.1
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 8.3e-29 133.3 170 51.2
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.8e-28 132.1 230 38.3
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.7e-26 125.6 204 38.2
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.1e-25 122.9 168 47.0
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.3e-18 98.6 109 48.6
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 2.3e-18 98.6 114 50.0
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.6e-14 85.1 109 47.7
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 4.4e-14 84.3 111 45.9
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.9e-13 81.6 100 49.0
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.4e-12 78.6 100 48.0
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.6e-11 75.9 151 35.1
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.5e-11 74.7 106 43.4
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 4.6e-11 74.3 143 35.7
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.0e-10 73.2 79 49.4
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.1e-10 70.9 118 37.3
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.9e-09 68.9 53 52.8
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 1.2e-06 59.7 43 58.1


User provided reference genes

Program Settings