Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 9.0e-210 733.4 388 100.0
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 7.4e-196 687.2 386 94.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 7.4e-196 687.2 386 94.8
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.0e-192 676.8 384 94.8
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 4.9e-192 674.5 384 94.3
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 8.4e-192 673.7 386 93.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 2.1e-190 669.1 386 92.7
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 7.9e-190 667.2 386 92.5
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 7.9e-190 667.2 384 92.7
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.9e-189 664.8 380 94.2
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.1e-188 663.3 384 93.2
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.9e-181 638.3 369 92.7
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 7.4e-172 607.4 353 91.5
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.2e-169 600.1 372 84.9
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.1e-166 589.3 364 86.3
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 5.7e-164 581.3 379 82.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 9.7e-164 580.5 356 87.6
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.8e-162 576.2 363 85.4
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.1e-162 575.5 351 82.1
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 9.1e-162 573.9 370 81.9
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.6e-161 573.2 379 81.3
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 2.0e-161 572.8 363 83.2
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.7e-160 569.7 359 83.8
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.7e-160 569.7 372 83.1
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.2e-160 569.3 364 82.7
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.0e-160 568.2 364 81.6
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 6.5e-160 567.8 382 81.4
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 8.5e-160 567.4 360 82.8
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 8.5e-160 567.4 369 79.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.1e-159 567.0 362 83.4
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.9e-159 566.2 364 79.7
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.9e-159 566.2 364 81.6
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 3.2e-159 565.5 364 79.1
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.2e-159 565.5 364 81.3
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 4.2e-159 565.1 355 85.1
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.2e-159 565.1 359 83.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.4e-159 563.9 362 82.6
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.7e-158 562.4 359 83.3
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.7e-158 562.4 366 82.5
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.7e-158 561.6 363 81.0
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 4.7e-158 561.6 364 83.2
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 4.7e-158 561.6 364 83.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 6.1e-158 561.2 364 83.8
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 8.0e-158 560.8 384 77.1
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.0e-157 560.5 392 74.2
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.4e-157 560.1 362 84.3
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 2.3e-157 559.3 371 80.6
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 3.0e-157 558.9 372 82.3
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.0e-157 558.5 362 82.0
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 5.2e-157 558.1 363 79.9
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.8e-157 557.4 361 79.5
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.0e-156 556.2 361 78.9
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 3.3e-156 555.4 351 87.7
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 3.3e-156 555.4 363 80.4
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 4.4e-156 555.1 363 80.7
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 4.4e-156 555.1 389 79.2
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 7.5e-156 554.3 388 77.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.5e-156 554.3 388 77.3
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 9.7e-156 553.9 385 79.2
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.3e-155 553.5 367 80.4
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.7e-155 553.1 362 78.2
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 4.8e-155 551.6 347 82.7
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.1e-154 550.4 363 77.1
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 1.4e-154 550.1 366 79.8
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.4e-154 549.3 373 79.9
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.4e-154 549.3 363 81.0
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.1e-154 548.9 380 80.3
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 4.1e-154 548.5 384 77.9
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.6e-153 546.6 384 77.1
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.6e-153 546.6 368 79.6
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 2.7e-153 545.8 365 80.5
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.3e-152 543.5 364 79.7
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.7e-152 543.1 349 77.7
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.7e-152 543.1 367 78.7
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.2e-152 542.7 365 80.3
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 6.5e-152 541.2 366 76.0
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.5e-151 540.0 375 79.2
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.2e-151 538.5 380 80.5
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 7.2e-151 537.7 370 74.1
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.4e-151 537.3 349 81.1
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 9.4e-151 537.3 360 75.0
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.2e-150 537.0 349 81.1
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.2e-150 537.0 330 81.2
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.6e-150 536.6 392 75.3
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.1e-150 536.2 342 79.2
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.0e-149 533.9 363 74.7
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.0e-149 533.9 349 80.8
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.8e-149 533.1 383 75.7
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.3e-149 532.7 386 71.5
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 2.3e-149 532.7 365 73.4
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 4.0e-149 531.9 358 79.1
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 6.8e-149 531.2 475 65.5
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 6.8e-149 531.2 362 74.6
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-148 530.4 372 73.1
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.5e-148 530.0 363 74.1
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.4e-148 528.9 370 73.5
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 5.7e-148 528.1 362 75.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 3.7e-147 525.4 373 78.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 6.3e-147 524.6 353 78.5
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 8.3e-147 524.2 383 70.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-146 523.9 355 74.6
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.4e-146 523.5 375 71.2
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.0e-146 521.2 355 78.6
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.2e-145 520.4 341 80.1
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.0e-145 519.6 385 69.6
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.7e-145 519.2 385 69.4
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 3.5e-145 518.8 319 81.5
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.5e-145 518.8 374 70.3
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.5e-145 518.8 388 69.1
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.3e-144 516.9 365 71.2
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.7e-144 516.5 308 81.8
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.6e-144 514.2 366 76.2
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.5e-143 512.7 373 72.1
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.2e-143 511.9 370 71.9
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.2e-142 510.4 308 80.2
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 3.6e-142 508.8 387 67.4
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.0e-142 507.7 326 80.1
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 5.2e-141 505.0 333 76.9
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 8.9e-141 504.2 381 73.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 3.7e-139 498.8 301 81.4
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 7.0e-138 494.6 356 71.1
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 7.8e-137 491.1 351 69.8
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.7e-136 490.0 371 67.9
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.3e-135 485.7 365 74.5
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.5e-135 484.2 303 84.5
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.6e-134 483.4 330 76.4
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.6e-134 482.3 371 67.7
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 3.7e-131 472.2 363 72.2
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 8.3e-131 471.1 343 73.5
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 4.1e-130 468.8 293 85.7
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.7e-129 466.1 364 71.4
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 6.2e-126 454.9 398 62.1
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 8.0e-126 454.5 281 79.4
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 4.1e-122 442.2 378 64.8
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.7e-121 439.5 357 67.2
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 1.0e-120 437.6 328 64.0
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.0e-117 425.6 380 62.1
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 5.2e-117 425.2 298 67.1
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.0e-116 423.3 263 79.8
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.9e-115 419.5 304 65.5
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.9e-115 418.7 301 66.4
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.4e-114 417.2 349 60.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.2e-114 416.0 357 65.5
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.7e-113 412.9 298 64.4
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.3e-111 406.0 221 91.0
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.4e-108 396.0 313 62.3
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 2.4e-106 389.8 416 53.8
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 6.0e-105 385.2 347 65.1
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 9.0e-93 344.7 246 73.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.7e-91 340.5 299 57.2
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.5e-84 315.8 211 69.2
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.6e-78 297.4 239 69.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 6.5e-67 258.8 150 82.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.5e-60 237.7 327 48.9
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 3.3e-55 219.9 170 70.0
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.2e-52 211.5 179 59.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.0e-39 167.5 175 53.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 5.7e-31 139.4 98 73.5
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.0e-28 131.0 317 30.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.6e-25 121.3 338 29.6
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.3e-24 117.5 65 81.5
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.0e-24 116.7 96 61.5
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.8e-21 107.8 282 28.4
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 7.0e-21 105.9 90 81.1
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.6e-20 103.2 91 78.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.9e-19 100.5 240 34.6
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 8.6e-19 99.0 70 71.4
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 8.6e-19 99.0 70 71.4
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 7.3e-18 95.9 70 70.0
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.6e-17 94.7 380 25.3
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 6.8e-16 89.4 78 64.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 5.4e-13 79.7 59 67.8
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 3.9e-11 73.6 108 36.1
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 4.3e-10 70.1 72 77.8
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 6.2e-09 66.2 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 3.4e-07 60.5 49 61.2


User provided reference genes

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