Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g06010 Schrenkiella parvula HOM05D004348 ORTHO05D006191 9.6e-203 709.9 349 100.0
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 5.0e-34 149.4 80 91.2
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 2.1e-32 144.1 76 93.4
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 5.2e-31 139.4 76 89.5
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 6.7e-31 139.0 76 89.5
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 5.9e-27 125.9 74 85.1
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 5.9e-27 125.9 74 85.1
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 7.7e-27 125.6 74 83.8
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 1.3e-26 124.8 74 83.8
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 1.5e-25 121.3 76 75.0
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 2.1e-24 117.5 76 72.4
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 1.0e-23 115.2 70 80.0
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 2.3e-23 114.0 76 73.7
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 8.8e-23 112.1 76 72.4
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 4.4e-22 109.8 125 50.4
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 4.4e-22 109.8 57 94.7
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 4.4e-22 109.8 75 72.0
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 4.4e-22 109.8 76 69.7
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 5.7e-22 109.4 79 68.4
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 5.7e-22 109.4 76 71.1
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 5.7e-22 109.4 76 71.1
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 5.7e-22 109.4 79 68.4
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 7.5e-22 109.0 76 69.7
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 7.5e-22 109.0 76 69.7
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 7.5e-22 109.0 79 68.4
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 9.7e-22 108.6 76 67.1
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 1.3e-21 108.2 57 93.0
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 1.3e-21 108.2 76 65.8
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 1.3e-21 108.2 76 67.1
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 1.7e-21 107.8 79 70.9
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 2.2e-21 107.5 77 70.1
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 2.8e-21 107.1 76 67.1
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 2.8e-21 107.1 73 72.6
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 2.8e-21 107.1 76 71.1
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 2.8e-21 107.1 76 68.4
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 3.7e-21 106.7 76 67.1
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 4.8e-21 106.3 85 63.5
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 4.8e-21 106.3 84 65.5
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 4.8e-21 106.3 76 67.1
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 4.8e-21 106.3 88 62.5
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 4.8e-21 106.3 76 67.1
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 6.3e-21 105.9 75 69.3
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 6.3e-21 105.9 78 67.9
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 1.1e-20 105.1 78 69.2
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 1.8e-20 104.4 69 73.9
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.8e-20 104.4 76 65.8
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 3.1e-20 103.6 76 68.4
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 4.1e-20 103.2 76 65.8
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 4.1e-20 103.2 77 67.5
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 4.1e-20 103.2 76 65.8
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 5.3e-20 102.8 70 71.4
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 5.3e-20 102.8 76 63.2
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 7.0e-20 102.4 73 69.9
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 9.1e-20 102.1 76 63.2
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 1.2e-19 101.7 75 66.7
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 4.5e-19 99.8 70 71.4
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 4.5e-19 99.8 68 70.6
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 7.7e-19 99.0 79 63.3
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 7.7e-19 99.0 70 70.0
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 1.0e-18 98.6 76 63.2
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.3e-18 98.2 78 66.7
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 1.3e-18 98.2 70 68.6
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 1.7e-18 97.8 76 61.8
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 1.7e-18 97.8 108 46.3
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 1.7e-18 97.8 76 63.2
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 6.5e-18 95.9 76 61.8
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 5.5e-17 92.8 71 63.4
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 5.5e-17 92.8 76 60.5
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 7.2e-17 92.4 112 45.5
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 7.2e-17 92.4 77 58.4
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 9.4e-17 92.0 70 60.0
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 9.4e-17 92.0 84 58.3
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 1.2e-16 91.7 73 57.5
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 1.6e-16 91.3 78 62.8
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 2.1e-16 90.9 70 60.0
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 3.6e-16 90.1 77 58.4
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 4.7e-16 89.7 76 57.9
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 4.0e-15 86.7 77 58.4
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.2e-14 85.1 72 58.3
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 1.5e-14 84.7 74 58.1
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 2.6e-14 84.0 76 60.5
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 5.7e-14 82.8 61 68.9
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 7.5e-14 82.4 69 60.9
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 7.5e-14 82.4 85 51.8
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 7.5e-14 82.4 73 56.2
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 1.3e-13 81.6 71 59.2
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 2.8e-13 80.5 81 55.6
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 3.7e-13 80.1 57 64.9
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 4.8e-13 79.7 59 64.4
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 4.8e-13 79.7 58 69.0
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 6.3e-13 79.3 57 68.4
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 6.3e-13 79.3 68 57.4
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 1.1e-12 78.6 57 66.7
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 1.1e-12 78.6 62 61.3
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 1.4e-12 78.2 59 62.7
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 1.8e-12 77.8 77 58.4
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 1.8e-12 77.8 68 55.9
Sp5g20550 Schrenkiella parvula HOM05D049516 ORTHO05D372218 3.1e-12 77.0 89 50.6
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 5.4e-12 76.3 57 63.2
SEGI_30856 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 7.0e-12 75.9 85 51.8
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 9.1e-12 75.5 74 52.7
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.0e-11 74.3 62 66.1
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 3.8e-10 70.1 73 49.3
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.5e-09 66.2 60 61.7
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 2.3e-07 60.8 35 85.7
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 5.2e-07 59.7 68 47.1
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 1.5e-06 58.2 98 34.7
Mapoly0017s0011 Marchantia polymorpha HOM05D004348 ORTHO05D006191 9.8e-06 55.5 73 41.1


User provided reference genes

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