Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g05980 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.3e-68 260.0 124 100.0
Sp4g06470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-23 112.8 96 55.2
Sp7g07530 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.7e-22 107.5 87 58.6
BolC2t08137H Brassica oleracea HOM05D001350 ORTHO05D001091 3.2e-20 102.1 108 50.0
Sp7g10230 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.4e-18 96.7 78 59.0
BraA02t08446Z Brassica rapa HOM05D001350 ORTHO05D001091 1.8e-18 96.3 92 52.2
BolC8t48012H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-18 95.9 93 50.5
Sp3g26380 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.0e-18 95.1 96 44.8
Sp6g09390 Schrenkiella parvula HOM05D001350 ORTHO05D001091 6.8e-18 94.4 93 47.3
BolC7t40726H Brassica oleracea HOM05D001350 ORTHO05D001091 8.8e-18 94.0 92 50.0
BolC6t36434H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-17 93.6 92 48.9
Sp7g08450 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.5e-17 93.2 90 50.0
Sp7g09760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.4e-17 92.0 93 45.2
Sp6g07660 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.4e-17 91.7 90 45.6
Sp5g17770 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.7e-17 91.3 94 41.5
Sp7g03320 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.5e-17 90.9 91 48.4
BolC2t10697H Brassica oleracea HOM05D001350 ORTHO05D001091 1.7e-16 89.7 82 52.4
Sp6g07800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.8e-16 89.0 88 48.9
Thhalv10019496m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 1.4e-15 86.7 85 49.4
Sp2g01850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-15 86.3 87 48.3
Sp4g09450 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.0e-15 84.3 91 48.4
Sp3g28720 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.1e-15 84.0 90 44.4
Thhalv10009844m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 1.2e-14 83.6 75 52.0
BolC5t29613H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-14 82.8 78 52.6
Sp3g29680 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.0e-14 82.8 93 40.9
BolC6t36228H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-14 82.0 83 48.2
BolC9t57914H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-14 82.0 75 50.7
BolC5t31784H Brassica oleracea HOM05D001350 ORTHO05D001091 5.9e-14 81.3 92 43.5
Sp3g23930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.9e-14 81.3 90 42.2
Sp7g26700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-13 80.1 91 39.6
Sp7g06400 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-13 79.3 115 36.5
BolC7t44101H Brassica oleracea HOM05D001350 ORTHO05D011193 8.5e-13 77.4 78 47.4
BolC5t28823H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-12 77.0 88 44.3
Sp1g29540 Schrenkiella parvula HOM05D001389 ORTHO05D001091 1.1e-12 77.0 88 42.0
BolC5t33249H Brassica oleracea HOM05D001350 ORTHO05D011193 1.5e-12 76.6 75 44.0
BolC8t52535H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-12 76.6 79 49.4
CARHR049200 Cardamine hirsuta HOM05D001350 ORTHO05D001091 2.5e-12 75.9 88 46.6
BolC7t42007H Brassica oleracea HOM05D001350 ORTHO05D001091 3.2e-12 75.5 65 52.3
BolC7t42715H Brassica oleracea HOM05D001350 ORTHO05D011193 7.2e-12 74.3 78 47.4
Thhalv10028742m.g Eutrema salsugineum HOM05D007480 ORTHO05D009460 1.2e-11 73.6 90 40.0
BolC7t42026H Brassica oleracea HOM05D001350 ORTHO05D011193 1.6e-11 73.2 78 48.7
Sp7g05470 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.6e-11 72.0 65 46.2
C04p20800 Brassica napus HOM05D001350 ORTHO05D001091 6.1e-11 71.2 74 43.2
BolC2t09000H Brassica oleracea HOM05D001350 ORTHO05D011193 6.1e-11 71.2 78 43.6
Sp4g11850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 8.0e-11 70.9 96 38.5
BraA03t14268Z Brassica rapa HOM05D001350 ORTHO05D001091 1.0e-10 70.5 77 45.5
Sp3g21330 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.0e-10 70.5 70 45.7
BcaC03g13858 Brassica carinata HOM05D001350 ORTHO05D011193 1.4e-10 70.1 78 44.9
Sp6g07960 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.0e-10 68.9 85 37.6
BolC1t04681H Brassica oleracea HOM05D001350 ORTHO05D011193 5.2e-10 68.2 78 44.9
Sp7g08950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.5e-09 66.6 102 34.3
BolC3t21149H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-09 66.2 77 41.6
Sp7g10630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.0e-09 66.2 90 34.4
BolC1t02449H Brassica oleracea HOM05D001350 ORTHO05D001091 3.4e-09 65.5 48 54.2
BolC5t32669H Brassica oleracea HOM05D001350 ORTHO05D028344 4.4e-09 65.1 68 45.6
SpUn0002_0800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 5.7e-09 64.7 87 37.9
A01p18400 Brassica napus HOM05D001350 ORTHO05D001091 9.8e-09 63.9 90 38.9
A02p34550 Brassica napus HOM05D001350 ORTHO05D001091 9.8e-09 63.9 90 38.9
A09p42880 Brassica napus HOM05D001350 ORTHO05D001091 9.8e-09 63.9 90 38.9
Sp2g22320 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.8e-09 63.9 81 45.7
Sp5g17980 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.8e-09 63.9 89 37.1
BolC4t24112H Brassica oleracea HOM05D001350 ORTHO05D011193 1.3e-08 63.5 78 43.6
BcaC07g42294 Brassica carinata HOM05D001350 ORTHO05D001091 1.7e-08 63.2 118 28.8
Sp3g31760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-08 62.8 78 44.9
SpUn0030_0070 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-08 62.8 78 44.9
Sp4g02440 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.8e-08 62.4 88 37.5
CARHR102280 Cardamine hirsuta HOM05D001350 ORTHO05D001091 3.7e-08 62.0 75 37.3
BcaC08g42980 Brassica carinata HOM05D001350 ORTHO05D001091 4.9e-08 61.6 88 36.4
BraA04t15952Z Brassica rapa HOM05D001350 ORTHO05D011193 4.9e-08 61.6 68 41.2
A10p19370 Brassica napus HOM05D003960 ORTHO05D004297 6.3e-08 61.2 51 47.1
BraSC37t46148Z Brassica rapa HOM05D001350 ORTHO05D001091 8.3e-08 60.8 73 38.4
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-07 59.7 101 34.7
BolC1t03684H Brassica oleracea HOM05D001350 ORTHO05D001091 1.8e-07 59.7 74 39.2
BolC4t24823H Brassica oleracea HOM05D001350 ORTHO05D001091 1.8e-07 59.7 101 34.7
BcaC03g16655 Brassica carinata HOM05D001350 ORTHO05D001091 2.4e-07 59.3 85 34.1
BcaC01g02077 Brassica carinata HOM05D001350 ORTHO05D001091 3.1e-07 58.9 88 33.0
BolC3t19138H Brassica oleracea HOM05D001350 ORTHO05D001091 3.1e-07 58.9 88 33.0
BolC7t43625H Brassica oleracea HOM05D001350 ORTHO05D001091 3.1e-07 58.9 87 31.0
Sp1g32350 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.1e-07 58.9 88 33.0
Sp3g24950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.1e-07 58.9 87 34.5
BcaC07g37777 Brassica carinata HOM05D001350 ORTHO05D001091 4.1e-07 58.5 88 34.1
BcaB08g34689 Brassica carinata HOM05D001350 ORTHO05D001091 5.4e-07 58.2 74 39.2
C05p17500 Brassica napus HOM05D001350 ORTHO05D001091 5.4e-07 58.2 88 33.0
BraA02t07957Z Brassica rapa HOM05D001350 ORTHO05D011193 5.4e-07 58.2 78 37.2
BraA05t19427Z Brassica rapa HOM05D001350 ORTHO05D001091 5.4e-07 58.2 74 36.5
BraA09t40337Z Brassica rapa HOM05D001350 ORTHO05D001091 5.4e-07 58.2 89 33.7
C09p50940 Brassica napus HOM05D001350 ORTHO05D001091 7.0e-07 57.8 80 36.2
BolC8t48745H Brassica oleracea HOM05D001350 ORTHO05D001091 7.0e-07 57.8 88 34.1
Sp7g05880 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.0e-07 57.8 73 38.4
BcaC03g16301 Brassica carinata HOM05D001350 ORTHO05D001091 1.2e-06 57.0 101 33.7
BolC2t10123H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-06 57.0 101 33.7
CARHR180870 Cardamine hirsuta HOM05D001350 ORTHO05D001091 1.2e-06 57.0 76 35.5
AL8G13400 Arabidopsis lyrata HOM05D001368 ORTHO05D001675 1.6e-06 56.6 66 45.5
BolC4t24258H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-06 56.6 88 35.2
BcaC01g05965 Brassica carinata HOM05D001350 ORTHO05D001091 2.0e-06 56.2 80 36.2
BraA07t27950Z Brassica rapa HOM05D001350 ORTHO05D001091 2.0e-06 56.2 87 35.6
BcaB04g17307 Brassica carinata HOM05D001350 ORTHO05D001091 3.5e-06 55.5 88 33.0
BcaC04g23025 Brassica carinata HOM05D001350 ORTHO05D001091 3.5e-06 55.5 88 30.7
AL5G13570 Arabidopsis lyrata HOM05D005250 ORTHO05D006342 4.5e-06 55.1 68 44.1
BcaB03g16442 Brassica carinata HOM05D001350 ORTHO05D001091 4.5e-06 55.1 88 31.8
BolC2t08930H Brassica oleracea HOM05D000048 ORTHO05D000207 5.9e-06 54.7 74 36.5
BraA01t02271Z Brassica rapa HOM05D001350 ORTHO05D001091 5.9e-06 54.7 87 36.8
BcaB02g09955 Brassica carinata HOM05D001350 ORTHO05D001091 7.7e-06 54.3 88 34.1
BcaB08g36771 Brassica carinata HOM05D001350 ORTHO05D001091 7.7e-06 54.3 88 31.8
A06p35120 Brassica napus HOM05D001350 ORTHO05D001091 7.7e-06 54.3 77 33.8
BolC3t19233H Brassica oleracea HOM05D001350 ORTHO05D001091 7.7e-06 54.3 89 32.6
BraA06t26432Z Brassica rapa HOM05D001350 ORTHO05D001091 7.7e-06 54.3 77 33.8
SpUn0738_0010 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.7e-06 54.3 74 37.8


User provided reference genes

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