Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g05290 Schrenkiella parvula HOM05D011300 ORTHO05D014887 0.0e+00 1510.0 796 100.0
Sp7g07750 Schrenkiella parvula HOM05D017415 ORTHO05D014887 2.4e-36 158.3 455 33.6
SpUn0016_0180 Schrenkiella parvula HOM05D017415 ORTHO05D014887 6.9e-31 140.2 399 33.1
Sp4g07770 Schrenkiella parvula HOM05D011300 ORTHO05D000563 3.8e-29 134.4 618 29.9
Sp3g27490 Schrenkiella parvula HOM05D000496 ORTHO05D014887 1.9e-28 132.1 168 44.6
Sp7g03830 Schrenkiella parvula HOM05D017415 ORTHO05D014887 5.7e-25 120.6 358 33.2
Sp7g04460 Schrenkiella parvula HOM05D017415 ORTHO05D014887 1.4e-23 115.9 126 52.4
BcaB03g13495 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-23 114.8 627 29.2
Sp3g26390 Schrenkiella parvula HOM05D011300 ORTHO05D014887 1.2e-22 112.8 426 29.8
BcaC05g28148 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-22 111.7 399 29.1
BcaB05g23101 Brassica carinata HOM05D012785 ORTHO05D014887 5.8e-22 110.5 460 29.1
BcaB04g20795 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-22 110.2 614 28.0
Thhalv10017817m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 1.0e-21 109.8 210 35.2
Sp3g28710 Schrenkiella parvula HOM05D011300 ORTHO05D011005 1.6e-19 102.4 451 31.3
BcaB03g15751 Brassica carinata HOM05D000496 ORTHO05D023995 6.1e-19 100.5 450 28.2
Sp6g05340 Schrenkiella parvula HOM05D011300 ORTHO05D014887 6.1e-19 100.5 463 30.9
Sp7g09760 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.3e-18 99.4 83 61.4
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-18 98.6 887 24.9
BcaC04g19063 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-17 93.2 350 30.6
Sp6g09000 Schrenkiella parvula HOM05D011300 ORTHO05D014887 9.7e-17 93.2 316 28.8
BcaC02g10576 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-15 87.0 208 36.5
CARHR218360 Cardamine hirsuta HOM05D000496 ORTHO05D000411 6.9e-15 87.0 134 39.6
BcaC08g47082 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-14 86.3 867 22.4
Carub.0024s0015 Capsella rubella HOM05D000496 ORTHO05D000411 2.0e-14 85.5 458 26.6
Sp6g10050 Schrenkiella parvula HOM05D011300 ORTHO05D014887 2.0e-14 85.5 111 50.5
BcaB08g36546 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-14 85.1 395 29.6
Sp5g19370 Schrenkiella parvula HOM05D000003 ORTHO05D001091 4.5e-14 84.3 80 53.8
BcaB04g17809 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-14 83.6 647 25.7
BcaC05g25643 Brassica carinata HOM05D012785 ORTHO05D020122 7.7e-14 83.6 147 39.5
Sp3g23930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-13 82.0 127 38.6
BcaC07g38360 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-13 81.3 224 30.4
SpUn0002_0120 Schrenkiella parvula HOM05D011300 ORTHO05D371518 5.0e-13 80.9 507 29.0
Sp7g19450 Schrenkiella parvula HOM05D011300 ORTHO05D372562 6.5e-13 80.5 223 30.9
BraA03t13711Z Brassica rapa HOM05D001350 ORTHO05D001091 8.5e-13 80.1 138 34.1
BcaC03g17123 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-12 79.3 836 22.4
C06p42380 Brassica napus HOM05D011400 ORTHO05D014089 3.2e-12 78.2 486 25.5
CARHR118460 Cardamine hirsuta HOM05D000496 ORTHO05D000411 4.2e-12 77.8 72 48.6
BcaB05g22528 Brassica carinata HOM05D000106 ORTHO05D000160 7.2e-12 77.0 113 43.4
BcaC03g15356 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-12 77.0 85 48.2
Sp7g10630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 9.4e-12 76.6 138 37.7
BolC8t47716H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-11 75.9 83 48.2
A09p42890 Brassica napus HOM05D008340 ORTHO05D000411 4.6e-11 74.3 289 27.7
BcaB07g33775 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-10 72.4 80 42.5
BcaC07g36881 Brassica carinata HOM05D000496 ORTHO05D027762 1.8e-10 72.4 119 37.0
BcaC09g48062 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-10 72.4 447 24.6
BolC5t30446H Brassica oleracea HOM05D011400 ORTHO05D014089 1.8e-10 72.4 85 38.8
BraA02t07760Z Brassica rapa HOM05D000003 ORTHO05D001091 3.0e-10 71.6 83 43.4
Carub.0008s1966 Capsella rubella HOM05D000496 ORTHO05D000411 3.0e-10 71.6 252 31.7
CARHR285080 Cardamine hirsuta HOM05D000496 ORTHO05D000411 3.0e-10 71.6 141 34.0
Sp7g26700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.0e-10 71.6 51 62.7
BolC2t10842H Brassica oleracea HOM05D000003 ORTHO05D001091 6.7e-10 70.5 67 46.3
A09p42770 Brassica napus HOM05D008340 ORTHO05D027787 8.8e-10 70.1 358 26.5
CARHR125790 Cardamine hirsuta HOM05D000496 ORTHO05D000411 8.8e-10 70.1 304 29.6
BcaC09g50139 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 69.7 75 45.3
Sp3g23940 Schrenkiella parvula HOM05D011300 ORTHO05D371539 1.1e-09 69.7 277 33.2
BcaC01g05965 Brassica carinata HOM05D001350 ORTHO05D001091 1.5e-09 69.3 140 31.4
BcaC03g14874 Brassica carinata HOM05D000496 ORTHO05D018575 2.0e-09 68.9 227 29.1
C02p52200 Brassica napus HOM05D011400 ORTHO05D014089 2.0e-09 68.9 472 25.4
BolC5t29151H Brassica oleracea HOM05D000496 ORTHO05D016098 2.5e-09 68.6 75 44.0
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-09 67.8 119 40.3
Sp7g04130 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.3e-09 67.8 51 54.9
AT2G22440 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 5.7e-09 67.4 68 48.5
BcaC03g14962 Brassica carinata HOM05D021069 ORTHO05D021877 5.7e-09 67.4 857 22.4
Sp1g31690 Schrenkiella parvula HOM05D008211 ORTHO05D011005 5.7e-09 67.4 299 30.4
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 7.4e-09 67.0 137 37.2
BcaB03g16835 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-09 66.6 251 29.5
BolC8t46983H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-08 66.2 80 40.0
BraA02t08446Z Brassica rapa HOM05D001350 ORTHO05D001091 1.3e-08 66.2 65 49.2
Thhalv10012224m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.3e-08 66.2 90 36.7
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-08 65.9 90 42.2
BolC2t11589H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-08 65.5 84 40.5
BolC8t48414H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-08 65.5 68 41.2
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-08 65.1 895 23.9
BolC2t10697H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-08 65.1 60 53.3
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-08 64.7 61 47.5
Sp5g20730 Schrenkiella parvula HOM05D001350 ORTHO05D001091 4.8e-08 64.3 77 44.2
BolC6t36501H Brassica oleracea HOM05D001350 ORTHO05D001091 8.2e-08 63.5 65 43.1
Sp7g06400 Schrenkiella parvula HOM05D001350 ORTHO05D001091 8.2e-08 63.5 48 54.2
Sp7g07510 Schrenkiella parvula HOM05D011300 ORTHO05D011005 8.2e-08 63.5 336 27.7
Aa31LG4G19050 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.1e-07 63.2 78 39.7
BcaC01g03406 Brassica carinata HOM05D008340 ORTHO05D014933 1.1e-07 63.2 99 35.4
BcaC03g15470 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 63.2 258 26.7
Aa31LG3G6250 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-07 62.8 147 29.3
BcaC07g37144 Brassica carinata HOM05D000496 ORTHO05D012985 1.4e-07 62.8 205 27.8
C04p27330 Brassica napus HOM05D012785 ORTHO05D020122 1.4e-07 62.8 177 34.5
BolC6t37122H Brassica oleracea HOM05D001350 ORTHO05D001091 1.4e-07 62.8 61 42.6
BolC6t37165H Brassica oleracea HOM05D000003 ORTHO05D001091 1.4e-07 62.8 72 43.1
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-07 62.4 204 31.4
Sp6g07800 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.8e-07 62.4 46 58.7
Sp3g29630 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.4e-07 62.0 51 51.0
AT1G43145 Arabidopsis thaliana HOM05D017415 ORTHO05D014887 3.1e-07 61.6 116 39.7
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-07 61.6 127 37.8
C08p01840 Brassica napus HOM05D000496 ORTHO05D000411 3.1e-07 61.6 237 27.8
BolC5t29613H Brassica oleracea HOM05D001350 ORTHO05D001091 4.1e-07 61.2 76 43.4
CANSAT80G2730 Cannabis sativa HOM05D000003 ORTHO05D000004 4.1e-07 61.2 70 40.0
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.3e-07 60.8 61 45.9
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-07 60.8 85 40.0
BcaC01g02492 Brassica carinata HOM05D000003 ORTHO05D001091 5.3e-07 60.8 63 44.4
Carub.0004s2922 Capsella rubella HOM05D000496 ORTHO05D000411 5.3e-07 60.8 252 27.0
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 5.3e-07 60.8 85 37.6
SpUn0002_0130 Schrenkiella parvula HOM05D011300 ORTHO05D372056 5.3e-07 60.8 38 81.6
BcaB05g24532 Brassica carinata HOM05D000003 ORTHO05D001091 6.9e-07 60.5 63 44.4
BolC1t01737H Brassica oleracea HOM05D008340 ORTHO05D000411 6.9e-07 60.5 304 26.3
BolC5t31742H Brassica oleracea HOM05D010593 ORTHO05D033440 6.9e-07 60.5 335 25.4
BolC7t41464H Brassica oleracea HOM05D001350 ORTHO05D001091 6.9e-07 60.5 75 41.3
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.9e-07 60.5 94 37.2
Sp7g10230 Schrenkiella parvula HOM05D001350 ORTHO05D001091 6.9e-07 60.5 51 52.9
Aa31LG7G10980 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.1e-07 60.1 57 42.1
BcaB06g27718 Brassica carinata HOM05D000003 ORTHO05D001498 9.1e-07 60.1 70 45.7
A10p11720 Brassica napus HOM05D001350 ORTHO05D001091 9.1e-07 60.1 63 44.4
A10p06470 Brassica napus HOM05D000496 ORTHO05D016100 1.2e-06 59.7 73 45.2
BolC1t04159H Brassica oleracea HOM05D000003 ORTHO05D011793 1.2e-06 59.7 89 37.1
Sp1g32360 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.2e-06 59.7 72 41.7
BcaC04g22969 Brassica carinata HOM05D008340 ORTHO05D027511 1.5e-06 59.3 276 26.4
BolC2t07967H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-06 59.3 66 42.4
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 58.9 84 40.5
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 2.0e-06 58.9 76 43.4
BcaC09g49534 Brassica carinata HOM05D008340 ORTHO05D014933 2.0e-06 58.9 213 28.2
BcaNung03207 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-06 58.9 264 25.4
BraA03t15685Z Brassica rapa HOM05D001350 ORTHO05D001091 2.0e-06 58.9 65 40.0
Sp4g06170 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.0e-06 58.9 48 52.1
Aa31sc129G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 58.5 111 33.3
BcaC01g01503 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-06 58.5 122 34.4
BolC9t59489H Brassica oleracea HOM05D000003 ORTHO05D001091 2.6e-06 58.5 70 38.6
Sp1g29320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.6e-06 58.5 84 36.9
Sp6g07810 Schrenkiella parvula HOM05D011300 ORTHO05D372425 2.6e-06 58.5 243 27.6
Sp7g07740 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.6e-06 58.5 48 52.1
Aa31sc1594G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-06 58.2 60 38.3
BolC9t57914H Brassica oleracea HOM05D001350 ORTHO05D001091 3.4e-06 58.2 60 48.3
Sp6g10060 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.4e-06 58.2 51 47.1
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-06 57.8 101 38.6
Aa31LG3G5010 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-06 57.8 88 34.1
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 4.5e-06 57.8 90 33.3
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 4.5e-06 57.8 61 41.0
BcaC08g45526 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-06 57.8 79 38.0
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-06 57.8 71 38.0
BcaB01g02268 Brassica carinata HOM05D000003 ORTHO05D000411 5.9e-06 57.4 61 50.8
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-06 57.4 66 42.4
BcaC01g02493 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-06 57.4 224 26.3
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-06 57.4 188 29.3
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-06 57.4 75 41.3
BolC3t19376H Brassica oleracea HOM05D000003 ORTHO05D000004 5.9e-06 57.4 67 43.3
BcaB08g34297 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-06 57.0 73 41.1
BcaC09g51821 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-06 57.0 261 25.3
BraA03t14403Z Brassica rapa HOM05D001350 ORTHO05D001091 7.7e-06 57.0 48 54.2
BraA06t23592Z Brassica rapa HOM05D001350 ORTHO05D001091 7.7e-06 57.0 61 42.6
QL08p047630 Quercus lobata HOM05D000003 ORTHO05D000004 7.7e-06 57.0 73 32.9
Sp7g07530 Schrenkiella parvula HOM05D001350 ORTHO05D001091 7.7e-06 57.0 51 52.9


User provided reference genes

Program Settings