Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 8.7e-160 567.0 305 100.0
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.9e-138 496.1 307 87.6
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 1.4e-136 490.0 305 86.6
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 2.3e-136 489.2 306 86.9
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 4.0e-136 488.4 305 86.2
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 4.0e-136 488.4 305 86.2
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 2.8e-134 482.3 307 86.3
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 4.2e-130 468.4 307 83.4
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.1e-129 466.1 306 83.3
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 6.8e-128 461.1 308 82.5
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.3e-126 456.8 307 81.4
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.2e-111 407.1 308 74.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 3.4e-111 405.6 322 69.9
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 1.1e-101 374.0 306 66.0
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 1.0e-99 367.5 302 66.2
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 8.6e-99 364.4 307 66.1
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.8e-96 356.7 264 71.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 4.0e-96 355.5 264 70.8
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 5.2e-96 355.1 264 70.8
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.4e-95 352.4 310 64.8
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.2e-94 349.7 307 66.1
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 2.4e-93 346.3 304 63.2
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.4e-93 346.3 307 63.5
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 7.1e-93 344.7 262 68.7
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.7e-92 342.8 260 67.3
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.7e-91 340.1 260 67.7
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 2.3e-91 339.7 304 61.2
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 1.1e-90 337.4 287 63.8
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 2.5e-90 336.3 317 61.5
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 4.3e-90 335.5 306 61.8
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 4.3e-90 335.5 307 62.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 5.6e-90 335.1 260 66.5
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 9.5e-90 334.3 300 61.3
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 2.1e-89 333.2 282 64.5
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 2.8e-89 332.8 312 62.5
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 4.7e-89 332.0 320 61.2
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.8e-88 330.1 260 65.4
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 2.3e-88 329.7 302 60.3
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 2.3e-88 329.7 300 60.3
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 6.8e-88 328.2 295 61.0
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.2e-87 327.4 302 59.6
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 2.0e-87 326.6 311 58.2
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 6.4e-86 321.6 305 59.3
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 6.4e-86 321.6 299 60.5
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 8.4e-86 321.2 304 59.9
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.1e-85 320.9 304 58.2
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 2.4e-85 319.7 302 61.3
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 5.4e-85 318.5 302 59.9
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 2.7e-84 316.2 313 59.1
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 2.7e-84 316.2 306 60.5
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 7.8e-84 314.7 309 58.6
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.3e-83 313.2 271 62.0
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.1e-82 310.8 304 58.2
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.9e-82 310.1 307 58.0
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.9e-82 310.1 278 61.5
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.1e-80 304.3 270 61.1
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 1.4e-80 303.9 274 60.9
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 3.1e-80 302.8 300 59.3
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 3.4e-79 299.3 254 63.0
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 3.4e-79 299.3 306 56.9
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 1.7e-78 297.0 250 63.6
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.2e-78 296.6 271 61.6
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.2e-78 296.6 325 55.4
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.9e-78 295.4 306 56.5
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.4e-78 295.0 317 56.8
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.4e-77 293.9 253 62.1
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.9e-77 293.5 317 56.8
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 2.4e-77 293.1 281 59.4
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 5.4e-77 292.0 258 59.7
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.2e-76 290.8 292 57.5
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.1e-76 290.0 227 67.0
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.1e-76 290.0 322 55.3
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 2.7e-76 289.7 213 69.0
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 7.8e-76 288.1 274 60.6
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.0e-75 287.7 277 58.8
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.7e-75 287.0 289 56.4
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 6.6e-75 285.0 304 53.6
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 6.2e-73 278.5 305 53.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 9.0e-72 274.6 211 68.2
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 9.0e-72 274.6 274 57.7
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.6e-71 273.1 288 53.1
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 1.7e-70 270.4 341 49.0
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 4.9e-70 268.9 305 53.8
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 4.9e-70 268.9 319 52.0
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 5.4e-69 265.4 257 56.4
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 1.2e-68 264.2 258 55.8
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 5.1e-67 258.8 284 51.8
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 3.3e-66 256.1 229 59.8
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 8.1e-65 251.5 224 62.9
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 4.5e-63 245.7 243 61.7
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 5.8e-63 245.4 248 58.1
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.6e-60 237.3 273 53.1
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.3e-59 234.2 188 66.0
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 3.9e-59 232.6 307 52.1
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 5.1e-51 205.7 222 55.9
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 3.7e-49 199.5 325 43.1
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 1.4e-48 197.6 149 68.5
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 6.9e-48 195.3 250 42.4
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 3.8e-46 189.5 211 48.3
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.0e-43 181.4 236 50.0
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 1.3e-41 174.5 240 42.1
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 1.7e-38 164.1 223 40.8
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 5.5e-37 159.1 162 60.5
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 3.6e-36 156.4 135 62.2
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 1.4e-35 154.5 141 55.3
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 2.6e-31 140.2 145 53.1
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 4.5e-31 139.4 120 63.3
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.5e-31 139.4 230 43.0
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 4.5e-31 139.4 130 53.8
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 4.2e-29 132.9 120 60.0
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 7.2e-29 132.1 115 60.0
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.6e-28 129.8 117 59.0
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 3.6e-28 129.8 121 59.5
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.7e-25 119.8 212 40.1
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.1e-20 102.4 111 55.0
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.2e-17 94.0 78 62.8
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 1.1e-16 91.7 83 56.6
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.4e-08 63.9 60 58.3
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 1.2e-07 61.6 42 69.0
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.9e-07 59.3 106 38.7


User provided reference genes

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