Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 0.0e+00 1138.3 606 100.0
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 7.0e-201 704.5 596 61.9
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 7.7e-200 701.0 596 61.4
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-198 696.4 596 61.6
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 7.2e-198 694.5 597 61.5
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 7.2e-198 694.5 596 61.6
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 4.0e-196 688.7 596 60.9
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.6e-192 676.8 598 60.5
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 2.2e-191 672.9 601 61.6
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-190 669.8 601 61.2
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.6e-189 666.8 597 61.8
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 4.0e-188 662.1 657 55.1
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 2.8e-186 656.0 593 59.7
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 2.3e-183 646.4 590 58.0
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-182 644.0 590 58.1
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-181 639.8 595 58.0
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 2.1e-181 639.8 595 58.0
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 4.7e-181 638.6 596 58.6
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 6.8e-180 634.8 595 57.6
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.2e-179 634.0 592 58.6
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.4e-179 632.1 592 57.8
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.2e-178 629.8 593 58.5
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 6.4e-178 628.2 595 58.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 7.0e-177 624.8 591 57.4
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.6e-175 618.2 598 56.9
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.7e-168 596.3 594 55.9
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.6e-158 562.0 589 54.7
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.2e-157 560.8 598 53.3
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 2.8e-157 559.7 601 52.2
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 2.3e-156 556.6 595 53.8
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-155 554.3 596 52.9
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.0e-155 553.5 600 52.5
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.6e-152 543.9 599 51.3
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.0e-147 526.9 569 52.0
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 9.9e-147 524.6 591 48.1
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.9e-146 522.3 584 51.7
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 1.6e-144 517.3 594 52.7
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.0e-144 515.4 600 46.2
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 1.3e-143 514.2 589 47.4
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.9e-143 512.7 596 46.6
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.3e-142 509.6 600 47.3
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.3e-141 507.7 590 48.6
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.8e-141 506.5 600 48.3
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 6.2e-141 505.4 586 48.5
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 5.3e-140 502.3 589 47.5
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-139 500.7 601 48.8
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 1.5e-139 500.7 589 47.4
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.5e-139 500.7 589 46.5
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 6.4e-138 495.4 600 47.5
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.1e-137 494.6 560 50.7
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 7.1e-137 491.9 598 48.3
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.1e-136 490.3 597 45.9
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 2.7e-136 490.0 587 45.7
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.5e-136 489.6 621 45.6
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 6.0e-136 488.8 598 48.5
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 7.9e-136 488.4 600 47.0
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.5e-131 474.2 594 44.9
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 9.3e-129 464.9 611 44.5
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.3e-127 460.3 599 46.2
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.1e-127 459.1 591 45.0
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 9.6e-126 454.9 593 43.8
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.2e-125 452.2 605 45.5
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.2e-123 448.0 592 46.3
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 9.3e-121 438.3 436 55.7
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.0e-119 433.3 592 46.3
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 5.9e-115 419.1 579 44.0
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.7e-112 410.2 600 42.8
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 6.3e-109 399.1 386 57.0
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-101 374.0 374 56.1
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-101 374.0 374 56.1
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.2e-82 310.8 298 55.0
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 3.4e-78 297.0 417 41.7
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.0e-74 285.4 620 33.7
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.4e-44 183.3 153 65.4
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-31 142.1 88 79.5
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 5.2e-31 140.2 281 34.2
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 3.4e-30 137.5 258 36.4
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 4.9e-29 133.7 81 81.5
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 4.6e-27 127.1 298 32.9
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 5.1e-26 123.6 194 39.7
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 1.4e-23 115.5 155 41.9
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 5.3e-23 113.6 217 33.2
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.5e-22 112.1 139 43.9
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 7.6e-22 109.8 122 51.6
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 4.6e-19 100.5 94 57.4
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 1.0e-18 99.4 91 49.5
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 6.2e-16 90.1 303 30.4
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 1.3e-13 82.4 104 46.2
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 1.1e-12 79.3 153 36.6
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 5.5e-12 77.0 101 45.5
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 2.7e-11 74.7 70 55.7
Haze_14298 Corylus avellana HOM05D000846 ORTHO05D001340 6.7e-10 70.1 301 24.6
Cfa007774 Carpinus fangiana HOM05D000846 ORTHO05D001340 1.9e-09 68.6 303 24.4
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 6.2e-08 63.5 125 33.6
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 2.0e-06 58.5 189 28.0


User provided reference genes

Program Settings