Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2541.1 1266 100.0
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2471.8 1266 96.7
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2470.7 1267 96.8
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2470.7 1266 96.7
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2467.2 1267 96.6
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2461.8 1268 96.4
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2447.9 1266 95.5
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2445.2 1268 96.1
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2444.5 1266 95.5
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2443.7 1267 95.7
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2438.3 1266 95.4
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2402.9 1270 93.2
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2345.5 1267 90.4
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2227.6 1266 85.5
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2222.2 1268 85.3
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2220.3 1266 85.3
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2219.9 1267 84.9
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2219.5 1266 85.4
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2216.0 1270 84.9
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2214.5 1267 85.6
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2212.6 1267 84.9
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2211.8 1260 86.2
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2210.6 1270 84.6
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2207.6 1264 85.2
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2206.0 1267 85.1
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2206.0 1260 85.6
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2204.9 1267 85.1
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2203.7 1268 84.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2199.9 1267 84.9
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1266 84.1
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2194.9 1267 84.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2192.9 1270 84.2
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2192.9 1267 84.6
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2192.2 1267 84.4
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2191.0 1270 83.9
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2189.5 1268 83.2
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1268 83.5
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2187.1 1267 84.0
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2181.8 1265 82.7
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2180.2 1265 83.8
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2178.7 1268 83.3
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2178.7 1263 83.6
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2178.7 1267 82.9
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2177.9 1268 82.9
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2177.5 1267 82.9
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2176.0 1265 84.1
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2175.6 1267 82.9
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2170.2 1266 83.7
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1267 84.0
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2166.0 1267 82.8
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2165.2 1275 82.7
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2164.4 1266 82.9
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2164.4 1267 83.5
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2164.0 1267 83.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1270 82.3
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1271 82.7
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2159.8 1265 83.2
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1266 82.7
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2159.0 1267 83.3
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1267 83.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2152.1 1259 83.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2151.7 1271 82.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2149.8 1267 82.3
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2148.6 1265 82.7
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2148.2 1267 81.8
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2144.0 1272 81.7
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2142.1 1238 84.1
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2139.8 1268 82.2
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2137.8 1266 82.7
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1271 81.7
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2136.3 1267 82.6
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2133.2 1267 82.6
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1266 81.8
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1263 81.9
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2131.3 1262 81.7
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2127.1 1267 81.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2127.1 1270 81.2
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1246 83.2
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1265 81.7
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2126.3 1206 85.9
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2119.7 1271 81.0
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2117.4 1272 80.8
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2110.5 1267 80.8
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2100.1 1072 96.7
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2092.8 1274 81.8
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2088.9 1271 80.3
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2078.5 1271 79.5
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2078.1 1263 79.7
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2077.8 1263 79.9
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2066.2 1265 80.2
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2063.1 1259 80.2
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2056.6 1270 78.4
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2025.4 1264 79.0
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2023.1 1267 78.1
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 2006.9 1262 77.9
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1972.6 1159 83.0
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1944.1 1276 74.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1891.3 1271 73.2
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1884.0 1278 72.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1860.5 1249 74.0
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1265 71.5
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1838.9 1191 75.9
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1815.8 1089 81.3
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1797.3 1130 79.9
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1790.4 1268 70.9
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1770.4 1267 70.8
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1623.6 966 80.5
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1563.1 1327 61.9
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1544.6 1049 72.6
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1374.4 1263 59.9
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1359.4 814 80.7
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1336.6 1330 53.6
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1310.4 1395 52.8
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1245.3 725 82.5
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1164.4 1018 61.6
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1131.7 808 71.8
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 7.1e-264 914.8 570 79.1
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.9e-261 906.7 1243 42.0
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.5e-258 895.6 502 87.5
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-227 793.9 652 62.4
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 3.2e-216 756.5 527 72.5
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 7.2e-200 702.2 450 78.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-183 648.3 389 83.8
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 4.3e-128 463.8 359 66.0
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 2.6e-117 427.9 313 71.6
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.1e-107 396.0 270 74.4
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 1.7e-79 302.4 476 41.6
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.4e-70 272.7 169 75.7
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.6e-69 267.7 169 75.1
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.9e-68 264.6 169 74.0
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 7.5e-64 250.4 138 89.9
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 6.6e-60 237.3 234 55.6
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 8.9e-49 200.3 116 80.2
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.3e-43 181.8 155 66.5
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.7e-39 169.5 91 85.7
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 8.4e-39 167.2 192 52.6
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.9e-30 139.4 101 62.4
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.1e-25 123.6 104 60.6


User provided reference genes

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