Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 7.0e-290 1000.0 531 100.0
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 8.2e-230 800.4 494 84.8
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.4e-221 773.1 491 82.5
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.2e-220 770.0 495 82.2
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.5e-220 769.6 495 82.4
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 7.7e-220 767.3 494 82.2
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 4.2e-218 761.5 497 80.5
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.4e-216 756.5 493 80.9
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.1e-213 745.3 489 81.0
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 2.4e-205 719.2 444 83.6
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 2.4e-205 719.2 444 83.6
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.0e-191 672.9 494 73.5
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.3e-182 643.7 502 69.5
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 9.6e-154 547.7 528 59.8
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.8e-150 535.8 549 57.4
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.5e-135 487.3 426 62.2
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.4e-133 480.7 444 60.8
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.8e-131 473.8 419 62.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 8.7e-131 471.5 459 59.7
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 2.5e-130 469.9 454 59.5
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 5.6e-130 468.8 474 58.6
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 5.6e-130 468.8 474 58.6
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.3e-129 467.6 459 58.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 8.1e-129 464.9 475 58.1
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 9.0e-128 461.5 448 59.4
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.8e-126 456.1 417 59.7
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.9e-123 446.0 463 57.0
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.5e-117 426.8 345 66.4
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 2.2e-110 403.7 508 48.2
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 2.9e-110 403.3 551 46.6
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 3.8e-110 402.9 524 49.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.1e-109 401.4 545 47.0
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 4.6e-108 396.0 508 48.8
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 6.1e-108 395.6 559 45.6
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.8e-107 394.0 544 46.7
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 5.1e-107 392.5 495 48.9
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 8.8e-107 391.7 489 48.7
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 2.2e-105 387.1 547 45.9
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 4.8e-105 386.0 449 48.6
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.1e-104 384.8 473 50.5
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.8e-104 384.0 556 45.7
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 2.4e-104 383.6 500 49.8
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 3.1e-104 383.3 473 49.9
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 4.1e-104 382.9 528 46.4
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 4.1e-104 382.9 542 47.4
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 5.3e-104 382.5 473 49.9
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 5.3e-104 382.5 461 50.5
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.5e-103 380.9 512 46.7
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.0e-103 380.6 578 44.6
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.5e-103 379.4 496 47.4
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 5.9e-103 379.0 531 47.1
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 2.2e-102 377.1 523 46.5
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 3.8e-102 376.3 399 54.9
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 6.5e-102 375.6 508 48.0
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 8.5e-102 375.2 543 45.9
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 2.5e-101 373.6 548 45.3
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 3.2e-101 373.2 511 46.2
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 3.2e-101 373.2 525 44.8
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 7.2e-101 372.1 510 46.3
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 2.7e-100 370.2 516 44.8
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 4.7e-100 369.4 503 46.5
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 6.1e-100 369.0 536 45.7
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 6.7e-99 365.5 469 47.8
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 8.8e-99 365.2 533 43.9
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.5e-98 364.4 491 47.5
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.5e-98 364.4 531 42.6
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.7e-97 360.9 549 42.1
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 8.2e-97 358.6 531 45.2
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.4e-96 357.1 449 47.9
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.1e-96 356.7 380 51.6
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 5.3e-96 355.9 482 45.6
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 5.3e-96 355.9 409 53.1
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.2e-95 354.8 528 41.9
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 3.5e-95 353.2 486 45.5
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 3.5e-95 353.2 522 42.7
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 4.5e-95 352.8 496 44.6
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 4.5e-95 352.8 412 52.2
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 4.5e-95 352.8 394 51.8
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 5.9e-95 352.4 481 46.2
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 7.7e-95 352.1 601 41.6
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 7.7e-95 352.1 482 47.1
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.7e-94 350.9 541 41.4
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 2.2e-94 350.5 522 43.1
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 2.9e-94 350.1 526 43.3
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 2.9e-94 350.1 374 50.3
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 2.9e-94 350.1 414 51.9
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 3.8e-94 349.7 524 45.0
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 5.0e-94 349.4 401 48.4
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.9e-93 347.4 412 51.2
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 4.2e-93 346.3 532 44.7
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 9.4e-93 345.1 427 49.2
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.2e-92 344.7 485 46.2
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.6e-92 343.2 462 47.2
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.4e-91 341.3 522 44.1
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 2.3e-91 340.5 452 44.9
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.0e-91 340.1 420 47.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 5.2e-91 339.3 509 43.6
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.2e-90 338.2 510 45.3
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 9.7e-90 335.1 392 50.8
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 9.7e-90 335.1 497 45.7
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 1.3e-89 334.7 477 45.7
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 1.4e-88 331.3 541 41.0
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 1.2e-87 328.2 474 43.9
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.2e-87 328.2 517 42.6
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 3.8e-86 323.2 528 40.0
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.5e-85 320.5 342 52.9
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 2.1e-84 317.4 534 41.9
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 4.7e-84 316.2 341 54.0
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.8e-83 314.3 333 48.6
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 2.0e-82 310.8 516 41.1
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 2.2e-81 307.4 415 43.4
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 4.8e-81 306.2 472 42.6
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 2.4e-80 303.9 463 40.2
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 5.4e-80 302.8 421 43.7
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 3.5e-79 300.1 613 35.9
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 5.9e-79 299.3 451 41.0
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.6e-76 290.0 382 45.5
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.0e-72 275.8 321 48.6
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 9.2e-72 275.4 360 44.7
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.3e-70 271.6 335 46.9
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.9e-69 267.7 420 40.7
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.5e-69 267.3 313 48.2
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.0e-67 261.9 339 45.7
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.3e-67 260.8 344 45.3
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 2.2e-65 254.2 427 40.3
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 4.9e-65 253.1 537 36.7
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 6.6e-62 242.7 357 41.5
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.4e-59 235.0 351 40.7
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 7.5e-58 229.2 275 50.5
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 2.9e-57 227.3 314 43.3
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 7.0e-56 222.6 296 46.3
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 9.2e-56 222.2 416 36.8
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.3e-54 217.6 193 57.5
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.6e-52 211.5 193 56.5
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.2e-47 195.3 166 59.0
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.6e-44 183.7 291 40.9
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 2.4e-40 171.0 222 47.3
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.6e-36 157.1 405 31.9
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.7e-30 138.3 511 29.7
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.1e-30 136.7 397 31.5
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 6.2e-28 129.8 202 38.6
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 1.2e-26 125.6 259 34.4
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.6e-23 115.2 478 27.2
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 1.9e-21 108.2 176 46.6
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.7e-20 104.0 182 44.0
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.4e-19 102.1 231 31.6
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.1e-19 100.9 216 34.7
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 5.5e-16 90.1 165 41.8
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 6.2e-12 76.6 196 32.1
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 1.8e-06 58.5 135 34.1


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