Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 7.2e-114 414.1 233 100.0
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 6.1e-20 102.1 75 70.7
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 1.2e-15 87.8 67 56.7
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.9e-14 83.2 80 57.5
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 4.7e-12 75.9 85 47.1
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 6.1e-12 75.5 56 57.1
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 6.1e-12 75.5 56 57.1
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 6.1e-12 75.5 56 57.1
Sp6g12523 Schrenkiella parvula HOM05D018387 ORTHO05D002086 6.1e-12 75.5 44 88.6
SpUn0015_0130 Schrenkiella parvula HOM05D018387 ORTHO05D002086 6.1e-12 75.5 44 88.6
SpUn0050_0030 Schrenkiella parvula HOM05D018387 ORTHO05D002086 6.1e-12 75.5 44 88.6
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 2.3e-11 73.6 85 45.9
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 2.3e-11 73.6 57 57.9
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.2e-10 71.2 85 43.5
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-10 71.2 57 61.4
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 4.4e-10 69.3 74 50.0
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 5.7e-10 68.9 58 58.6
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 5.7e-10 68.9 57 59.6
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 9.7e-10 68.2 57 50.9
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.2e-09 67.0 59 49.2
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.2e-09 67.0 69 52.2
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 66.6 57 57.9
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 66.6 57 57.9
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 66.6 57 57.9
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 66.6 57 57.9
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 4.8e-09 65.9 51 54.9
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 1.1e-08 64.7 48 58.3
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 1.4e-08 64.3 58 56.9
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.8e-08 63.9 66 48.5
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-08 63.5 44 59.1
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.4e-08 63.5 59 47.5
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.4e-08 63.5 57 45.6
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.1e-08 63.2 105 37.1
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 4.1e-08 62.8 44 59.1
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 4.1e-08 62.8 57 56.1
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 4.1e-08 62.8 48 56.2
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 7.0e-08 62.0 48 54.2
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 7.0e-08 62.0 97 43.3
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 7.0e-08 62.0 77 45.5
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 7.0e-08 62.0 77 45.5
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 9.1e-08 61.6 74 45.9
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 9.1e-08 61.6 74 45.9
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 9.1e-08 61.6 54 48.1
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.2e-07 61.2 65 47.7
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.6e-07 60.8 77 45.5
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 1.6e-07 60.8 53 49.1
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 2.0e-07 60.5 122 34.4
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 2.7e-07 60.1 95 43.2
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 2.7e-07 60.1 95 43.2
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.7e-07 60.1 91 44.0
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.9e-07 58.9 72 45.8
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 7.7e-07 58.5 81 43.2
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 7.7e-07 58.5 94 36.2
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-06 57.8 76 44.7
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.3e-06 57.8 72 41.7
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 2.2e-06 57.0 91 39.6
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.2e-06 57.0 52 50.0
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 5.0e-06 55.8 64 42.2
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 5.0e-06 55.8 43 53.5
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 6.5e-06 55.5 61 47.5
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 8.5e-06 55.1 66 37.9
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 8.5e-06 55.1 48 52.1
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 8.5e-06 55.1 78 43.6
Sp6g09820 Schrenkiella parvula HOM05D007693 ORTHO05D002086 8.5e-06 55.1 51 49.0


User provided reference genes

Program Settings