Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.4e-147 526.2 252 100.0
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 2.1e-135 485.7 252 90.1
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 3.6e-135 485.0 252 90.1
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 3.6e-135 485.0 252 90.1
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 3.6e-135 485.0 252 90.1
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 3.6e-135 485.0 252 90.1
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.3e-134 482.3 252 90.1
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 5.8e-133 477.6 252 88.9
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 1.9e-131 472.6 252 87.7
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 9.2e-131 470.3 253 87.7
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.7e-130 468.8 252 85.7
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 7.3e-128 460.7 252 84.9
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 1.1e-123 446.8 252 82.1
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 2.5e-112 409.1 250 75.6
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 1.4e-102 376.7 252 68.3
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 6.4e-100 367.9 252 67.1
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 5.4e-99 364.8 252 64.7
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.1e-98 362.8 252 65.5
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.5e-98 362.1 252 65.9
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 3.5e-98 362.1 252 65.9
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.6e-98 361.7 248 66.1
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 1.0e-97 360.5 252 64.7
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.0e-97 360.5 252 64.7
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.3e-97 360.1 249 65.9
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.3e-97 360.1 252 65.5
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 1.8e-97 359.8 252 65.1
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 3.0e-97 359.0 252 62.7
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 3.9e-97 358.6 249 65.1
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 5.1e-97 358.2 254 63.4
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 6.7e-97 357.8 252 64.7
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 6.7e-97 357.8 248 64.9
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.9e-96 356.3 254 64.6
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 1.9e-96 356.3 249 64.7
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.9e-96 356.3 252 63.9
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 2.5e-96 355.9 246 65.4
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 3.3e-96 355.5 254 65.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 3.3e-96 355.5 254 63.0
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 5.6e-96 354.8 252 63.5
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.3e-95 353.6 252 63.9
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 1.3e-95 353.6 252 63.5
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.6e-95 353.2 252 63.5
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 2.1e-95 352.8 252 64.3
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 2.8e-95 352.4 249 63.5
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 8.1e-95 350.9 252 63.1
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 1.1e-94 350.5 252 63.1
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.1e-94 350.5 253 64.4
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.1e-94 350.5 252 63.9
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.4e-94 350.1 253 64.8
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.4e-94 349.4 252 63.1
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 4.0e-94 348.6 254 64.2
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 5.3e-94 348.2 254 64.2
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 5.3e-94 348.2 253 64.4
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 1.2e-93 347.1 252 62.3
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.0e-93 346.3 249 63.9
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 2.6e-93 345.9 256 63.3
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 7.6e-93 344.4 248 62.9
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 9.9e-93 344.0 254 63.0
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 2.2e-92 342.8 253 63.2
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 2.9e-92 342.4 254 63.4
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 3.8e-92 342.0 252 61.9
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 3.8e-92 342.0 252 60.3
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 4.9e-92 341.7 253 63.2
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 8.4e-92 340.9 248 61.7
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.9e-91 339.7 252 61.1
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 2.5e-91 339.3 249 63.1
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 2.5e-91 339.3 252 62.3
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 2.5e-91 339.3 254 62.2
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 4.2e-91 338.6 252 62.3
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 4.2e-91 338.6 253 62.5
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 4.2e-91 338.6 254 62.2
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 7.1e-91 337.8 253 62.1
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 9.3e-91 337.4 252 61.5
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.2e-90 337.0 252 61.5
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.2e-90 337.0 252 61.9
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 2.1e-90 336.3 254 61.8
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.7e-90 335.9 247 61.9
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 2.7e-90 335.9 253 61.3
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.9e-89 332.0 247 60.7
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 8.7e-89 330.9 252 60.3
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.9e-88 329.7 252 61.1
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 3.3e-88 328.9 252 61.1
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 5.6e-88 328.2 251 59.0
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 5.6e-88 328.2 252 61.1
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 7.4e-88 327.8 249 59.4
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 8.2e-87 324.3 248 59.3
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 4.0e-86 322.0 252 59.5
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 9.0e-86 320.9 252 61.1
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.2e-85 320.5 252 57.9
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 2.6e-85 319.3 253 58.1
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 4.5e-85 318.5 252 60.7
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 5.8e-85 318.2 252 57.1
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.3e-84 317.0 253 59.3
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 8.4e-84 314.3 264 58.3
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 1.3e-79 300.4 248 56.0
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.6e-79 300.1 252 55.2
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 8.2e-79 297.7 230 60.0
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.5e-77 293.5 241 58.5
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 9.4e-75 284.3 239 52.3
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 5.1e-73 278.5 203 60.1
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 6.7e-73 278.1 250 50.4
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.5e-72 276.9 253 51.4
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 5.7e-72 275.0 252 52.4
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.2e-71 273.1 249 53.0
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.7e-68 263.5 247 52.2
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 5.9e-61 238.4 252 46.8
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.4e-59 233.8 251 44.6
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.9e-59 233.4 269 45.7
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.6e-53 213.0 151 59.6
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 6.8e-49 198.4 141 68.1
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 2.8e-47 193.0 285 40.7
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 8.0e-42 174.9 260 40.8
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 7.5e-40 168.3 111 64.0
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 1.2e-37 161.0 101 75.2
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 2.8e-31 139.8 97 68.0
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 5.0e-20 102.4 70 52.9
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 2.3e-17 93.6 54 63.0
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 3.1e-17 93.2 155 39.4
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.1e-17 93.2 89 53.9
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 3.7e-15 86.3 49 65.3
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 5.4e-14 82.4 45 77.8
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 1.7e-07 60.8 121 34.7
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 1.4e-06 57.8 99 35.4
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 1.9e-06 57.4 115 33.0


User provided reference genes

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